RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 VPS25Q9BRG1 176 aa9.5□□□□□ -0.89
SMAD9-202ENST00000379826 H3BTX0 84 aa9.5□□□□□ -0.89
SMAD9-202ENST00000379826 NUTF2P61970 127 aaKnown RBP9.5□□□□□ -0.89
SMAD9-202ENST00000379826 DMRTA1Q5VZB9 504 aa9.5□□□□□ -0.89
SMAD9-202ENST00000379826 TMEM14EPQ6UXP3 125 aa9.5□□□□□ -0.89
SMAD9-202ENST00000379826 LOC102724200A0A096LPH7 203 aaPredicted RBP9.49□□□□□ -0.89
SMAD9-202ENST00000379826 A8MWP6 167 aa9.49□□□□□ -0.89
SMAD9-202ENST00000379826 RBP4P02753 201 aa9.49□□□□□ -0.89
SMAD9-202ENST00000379826 TNFRSF1AP19438 455 aa9.49□□□□□ -0.89
SMAD9-202ENST00000379826 TFPI2P48307 235 aa9.49□□□□□ -0.89
SMAD9-202ENST00000379826 VWA1Q6PCB0 445 aa9.49□□□□□ -0.89
SMAD9-202ENST00000379826 TEX38Q6PEX7 206 aa9.49□□□□□ -0.89
SMAD9-202ENST00000379826 FAM214BQ7L5A3 538 aa9.49□□□□□ -0.89
SMAD9-202ENST00000379826 LINC01551Q86U37 167 aa9.49□□□□□ -0.89
SMAD9-202ENST00000379826 AGMATQ9BSE5 352 aa9.49□□□□□ -0.89
SMAD9-202ENST00000379826 BET1LQ9NYM9 111 aa9.49□□□□□ -0.89
SMAD9-202ENST00000379826 CALYQ9NYX4 217 aa9.49□□□□□ -0.89
SMAD9-202ENST00000379826 TRAV3A0A0B4J244 114 aa9.49□□□□□ -0.89
SMAD9-202ENST00000379826 LINC00473A8K010 186 aa9.49□□□□□ -0.89
SMAD9-202ENST00000379826 PDPNQ86YL7 162 aa9.49□□□□□ -0.89
SMAD9-202ENST00000379826 FDCSPQ8NFU4 85 aa9.49□□□□□ -0.89
SMAD9-202ENST00000379826 FLYWCH2Q96CP2 140 aaKnown RBP9.49□□□□□ -0.89
SMAD9-202ENST00000379826 HARBI1Q96MB7 349 aa9.49□□□□□ -0.89
SMAD9-202ENST00000379826 NABP2Q9BQ15 211 aa9.49□□□□□ -0.89
SMAD9-202ENST00000379826 FGF23Q9GZV9 251 aaPredicted RBP9.49□□□□□ -0.89
SMAD9-202ENST00000379826 PRNDQ9UKY0 176 aa9.49□□□□□ -0.89
SMAD9-202ENST00000379826 GPR6P46095 362 aaPredicted RBP9.49□□□□□ -0.89
SMAD9-202ENST00000379826 Q6ZS49 121 aa9.49□□□□□ -0.89
SMAD9-202ENST00000379826 REG1AP05451 166 aa9.49□□□□□ -0.89
SMAD9-202ENST00000379826 TMEM11P17152 192 aa9.49□□□□□ -0.89
SMAD9-202ENST00000379826 ITLN1Q8WWA0 313 aa9.49□□□□□ -0.89
SMAD9-202ENST00000379826 PRSS8Q16651 343 aa9.48□□□□□ -0.89
SMAD9-202ENST00000379826 CCL17Q92583 94 aa9.48□□□□□ -0.89
SMAD9-202ENST00000379826 TNFSF10P50591 281 aa9.48□□□□□ -0.89
SMAD9-202ENST00000379826 PAXXQ9BUH6 204 aa9.48□□□□□ -0.89
SMAD9-202ENST00000379826 YTHDF2Q9Y5A9 579 aaKnown RBP9.48□□□□□ -0.89
SMAD9-202ENST00000379826 MGST3O14880 152 aa9.48□□□□□ -0.89
SMAD9-202ENST00000379826 LYZP61626 148 aa9.48□□□□□ -0.89
SMAD9-202ENST00000379826 OR4B1Q8NGF8 309 aa9.48□□□□□ -0.89
SMAD9-202ENST00000379826 M0QZ24 198 aa9.48□□□□□ -0.89
SMAD9-202ENST00000379826 MYOD1P15172 320 aa9.48□□□□□ -0.89
SMAD9-202ENST00000379826 TIMP3P35625 211 aa9.48□□□□□ -0.89
SMAD9-202ENST00000379826 ERASQ7Z444 233 aa9.48□□□□□ -0.89
SMAD9-202ENST00000379826 LHFPL4Q7Z7J7 247 aa9.48□□□□□ -0.89
SMAD9-202ENST00000379826 PFN1P07737 140 aaKnown RBP9.48□□□□□ -0.89
SMAD9-202ENST00000379826 OR4A47Q6IF82 309 aa9.48□□□□□ -0.89
SMAD9-202ENST00000379826 TREML4Q6UXN2 200 aa9.48□□□□□ -0.89
SMAD9-202ENST00000379826 Q6ZPA2 131 aa9.48□□□□□ -0.89
SMAD9-202ENST00000379826 RNF24Q9Y225 148 aa9.48□□□□□ -0.89
SMAD9-202ENST00000379826 PCDH15Q96QU1 1955 aa9.47□□□□□ -0.89
SMAD9-202ENST00000379826 PDLIM4P50479 330 aa9.47□□□□□ -0.89
SMAD9-202ENST00000379826 MOB3BQ86TA1 216 aa9.47□□□□□ -0.89
SMAD9-202ENST00000379826 MGST2Q99735 147 aa9.47□□□□□ -0.89
SMAD9-202ENST00000379826 A0A1W2PRD5 423 aa9.47□□□□□ -0.89
SMAD9-202ENST00000379826 A0A1W2PRF3 423 aa9.47□□□□□ -0.89
SMAD9-202ENST00000379826 A0A1W2PRM7 423 aa9.47□□□□□ -0.89
SMAD9-202ENST00000379826 CA1P00915 261 aaPredicted RBP9.47□□□□□ -0.89
SMAD9-202ENST00000379826 TNXAQ16473 311 aa9.47□□□□□ -0.89
SMAD9-202ENST00000379826 OR1L4Q8NGR5 311 aa9.47□□□□□ -0.89
SMAD9-202ENST00000379826 ST6GALNAC6Q969X2 333 aa9.47□□□□□ -0.89
SMAD9-202ENST00000379826 MIEN1Q9BRT3 115 aa9.47□□□□□ -0.89
SMAD9-202ENST00000379826 TMEM106BQ9NUM4 274 aa9.47□□□□□ -0.89
SMAD9-202ENST00000379826 SPRR3Q9UBC9 169 aa9.47□□□□□ -0.89
SMAD9-202ENST00000379826 RNF7Q9UBF6 113 aa9.47□□□□□ -0.89
SMAD9-202ENST00000379826 IL18BPO95998 194 aa9.47□□□□□ -0.89
SMAD9-202ENST00000379826 PRB4P10163 310 aaPredicted RBP9.47□□□□□ -0.89
SMAD9-202ENST00000379826 HSPE1P61604 102 aaKnown RBP9.47□□□□□ -0.89
SMAD9-202ENST00000379826 ZFP36L1Q07352 338 aaKnown RBP9.47□□□□□ -0.89
SMAD9-202ENST00000379826 C2orf88Q9BSF0 95 aa9.47□□□□□ -0.89
SMAD9-202ENST00000379826 POLR3KQ9Y2Y1 108 aaPredicted RBP9.47□□□□□ -0.89
SMAD9-202ENST00000379826 LINC00869P0C866 280 aa9.47□□□□□ -0.89
SMAD9-202ENST00000379826 WDR82Q6UXN9 313 aa9.47□□□□□ -0.89
SMAD9-202ENST00000379826 C3orf56Q8N813 242 aa9.47□□□□□ -0.89
SMAD9-202ENST00000379826 CHRDL1Q9BU40 450 aa9.47□□□□□ -0.89
SMAD9-202ENST00000379826 SAP30LQ9HAJ7 183 aa9.47□□□□□ -0.89
SMAD9-202ENST00000379826 SEPSECSQ9HD40 501 aaKnown RBP9.47□□□□□ -0.89
SMAD9-202ENST00000379826 JPT1Q9UK76 154 aa9.47□□□□□ -0.89
SMAD9-202ENST00000379826 EML5Q05BV3 1969 aa9.46□□□□□ -0.89
SMAD9-202ENST00000379826 KCNS1Q96KK3 526 aa9.46□□□□□ -0.89
SMAD9-202ENST00000379826 ELOVL5Q9NYP7 299 aa9.46□□□□□ -0.89
SMAD9-202ENST00000379826 WASHC3Q9Y3C0 194 aa9.46□□□□□ -0.89
SMAD9-202ENST00000379826 MRPS18CQ9Y3D5 142 aaKnown RBP9.46□□□□□ -0.89
SMAD9-202ENST00000379826 IGHV3-72A0A0B4J1Y9 119 aa9.46□□□□□ -0.89
SMAD9-202ENST00000379826 IQCF6A8MYZ5 107 aa9.46□□□□□ -0.89
SMAD9-202ENST00000379826 CDKN1AP38936 164 aa9.46□□□□□ -0.89
SMAD9-202ENST00000379826 SSX8Q7RTT4 187 aa9.46□□□□□ -0.89
SMAD9-202ENST00000379826 DMRTC2Q8IXT2 367 aaPredicted RBP9.46□□□□□ -0.89
SMAD9-202ENST00000379826 IGKV3D-15A0A087WSY6 115 aa9.46□□□□□ -0.9
SMAD9-202ENST00000379826 P01737 135 aa9.46□□□□□ -0.9
SMAD9-202ENST00000379826 HTR1DP28221 377 aa9.46□□□□□ -0.9
SMAD9-202ENST00000379826 ADTRPQ96IZ2 230 aa9.46□□□□□ -0.9
SMAD9-202ENST00000379826 MRPL37Q9BZE1 423 aaKnown RBP9.46□□□□□ -0.9
SMAD9-202ENST00000379826 hADV38S2A0JD32 116 aa9.46□□□□□ -0.9
SMAD9-202ENST00000379826 WDR86Q86TI4 376 aa9.46□□□□□ -0.9
SMAD9-202ENST00000379826 PGLYRP4Q96LB8 373 aa9.46□□□□□ -0.9
SMAD9-202ENST00000379826 TXNDC17Q9BRA2 123 aa9.46□□□□□ -0.9
SMAD9-202ENST00000379826 SCRT1Q9BWW7 348 aa9.46□□□□□ -0.9
SMAD9-202ENST00000379826 UQCR10Q9UDW1 63 aa9.46□□□□□ -0.9
SMAD9-202ENST00000379826 CECR9P0C854 216 aa9.45□□□□□ -0.9
SMAD9-202ENST00000379826 CCL8P80075 99 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms