RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 PLAUP00749 431 aa12.19□□□□□ -0.46
PRNP-201ENST00000379440 PPIAL4FP0DN26 164 aa12.19□□□□□ -0.46
PRNP-201ENST00000379440 GRNP28799 593 aaKnown RBP12.19□□□□□ -0.46
PRNP-201ENST00000379440 PTTG1IPP53801 180 aa12.19□□□□□ -0.46
PRNP-201ENST00000379440 LYPD2Q6UXB3 125 aa12.19□□□□□ -0.46
PRNP-201ENST00000379440 CLDND2Q8NHS1 167 aa12.19□□□□□ -0.46
PRNP-201ENST00000379440 NGBQ9NPG2 151 aa12.19□□□□□ -0.46
PRNP-201ENST00000379440 TMEM140Q9NV12 185 aa12.19□□□□□ -0.46
PRNP-201ENST00000379440 PPIAL4AQ9Y536 164 aa12.19□□□□□ -0.46
PRNP-201ENST00000379440 PUS1Q9Y606 427 aaKnown RBP eCLIP12.19□□□□□ -0.46
PRNP-201ENST00000379440 SPTBN4Q9H254 2564 aa12.19□□□□□ -0.46
PRNP-201ENST00000379440 CCL3L1P16619 93 aa12.19□□□□□ -0.46
PRNP-201ENST00000379440 ERVK-16P61578 105 aa12.19□□□□□ -0.46
PRNP-201ENST00000379440 RELBQ01201 579 aa12.19□□□□□ -0.46
PRNP-201ENST00000379440 ICAM4Q14773 271 aa12.19□□□□□ -0.46
PRNP-201ENST00000379440 SSX8Q7RTT4 187 aa12.19□□□□□ -0.46
PRNP-201ENST00000379440 RNASEH2CQ8TDP1 164 aaKnown RBP12.19□□□□□ -0.46
PRNP-201ENST00000379440 DYNLRB1Q9NP97 96 aa12.19□□□□□ -0.46
PRNP-201ENST00000379440 TMEM106BQ9NUM4 274 aa12.19□□□□□ -0.46
PRNP-201ENST00000379440 hADV38S2A0JD32 116 aa12.18□□□□□ -0.46
PRNP-201ENST00000379440 C15orf62A8K5M9 175 aa12.18□□□□□ -0.46
PRNP-201ENST00000379440 IGKV1D-33P01593 117 aa12.18□□□□□ -0.46
PRNP-201ENST00000379440 IGKV1-33P01594 117 aa12.18□□□□□ -0.46
PRNP-201ENST00000379440 RPL29P47914 159 aaKnown RBP12.18□□□□□ -0.46
PRNP-201ENST00000379440 SELENOTP62341 195 aa12.18□□□□□ -0.46
PRNP-201ENST00000379440 SERF2P84101 59 aa12.18□□□□□ -0.46
PRNP-201ENST00000379440 TFF3Q07654 80 aa12.18□□□□□ -0.46
PRNP-201ENST00000379440 RCC1LQ96I51 464 aaKnown RBP12.18□□□□□ -0.46
PRNP-201ENST00000379440 TMEM147Q9BVK8 224 aa12.18□□□□□ -0.46
PRNP-201ENST00000379440 LINC00574Q9H8X3 128 aa12.18□□□□□ -0.46
PRNP-201ENST00000379440 RPUSD1Q9UJJ7 312 aaKnown RBP12.18□□□□□ -0.46
PRNP-201ENST00000379440 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.18□□□□□ -0.46
PRNP-201ENST00000379440 GCGP01275 180 aa12.18□□□□□ -0.46
PRNP-201ENST00000379440 HBE1P02100 147 aa12.18□□□□□ -0.46
PRNP-201ENST00000379440 SRP19P09132 144 aaKnown RBP12.18□□□□□ -0.46
PRNP-201ENST00000379440 BRS3P32247 399 aa12.18□□□□□ -0.46
PRNP-201ENST00000379440 RPL31P62899 125 aaKnown RBP12.18□□□□□ -0.46
PRNP-201ENST00000379440 SOHLH1Q5JUK2 328 aa12.18□□□□□ -0.46
PRNP-201ENST00000379440 C11orf42Q8N5U0 333 aa12.18□□□□□ -0.46
PRNP-201ENST00000379440 OR4S2Q8NH73 311 aa12.18□□□□□ -0.46
PRNP-201ENST00000379440 ELOVL1Q9BW60 279 aa12.18□□□□□ -0.46
PRNP-201ENST00000379440 GNG13Q9P2W3 67 aa12.18□□□□□ -0.46
PRNP-201ENST00000379440 UCNP55089 124 aa12.17□□□□□ -0.46
PRNP-201ENST00000379440 TMEM41BQ5BJD5 291 aa12.17□□□□□ -0.46
PRNP-201ENST00000379440 ZNF787Q6DD87 383 aa12.17□□□□□ -0.46
PRNP-201ENST00000379440 ACSM6Q6P461 480 aa12.17□□□□□ -0.46
PRNP-201ENST00000379440 C1orf87Q8N0U7 546 aa12.17□□□□□ -0.46
PRNP-201ENST00000379440 ZCCHC14Q8WYQ9 949 aaKnown RBP12.17□□□□□ -0.46
PRNP-201ENST00000379440 PINX1Q96BK5 328 aaKnown RBP12.17□□□□□ -0.46
PRNP-201ENST00000379440 RNF2Q99496 336 aa12.17□□□□□ -0.46
PRNP-201ENST00000379440 HIPK2Q9H2X6 1198 aa12.17□□□□□ -0.46
PRNP-201ENST00000379440 LINC00312Q9Y6C7 94 aa12.17□□□□□ -0.46
PRNP-201ENST00000379440 TET2Q6N021 2002 aaPredicted RBP12.17□□□□□ -0.46
PRNP-201ENST00000379440 CA7P43166 264 aa12.17□□□□□ -0.46
PRNP-201ENST00000379440 ZNF506Q5JVG8 444 aa12.17□□□□□ -0.46
PRNP-201ENST00000379440 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.17□□□□□ -0.46
PRNP-201ENST00000379440 OR13D1Q8NGV5 346 aa12.17□□□□□ -0.46
PRNP-201ENST00000379440 H1FXQ92522 213 aaKnown RBP12.17□□□□□ -0.46
PRNP-201ENST00000379440 ATRXP46100 2492 aa12.16□□□□□ -0.46
PRNP-201ENST00000379440 TRAV1-1A0A0B4J248 108 aa12.16□□□□□ -0.46
PRNP-201ENST00000379440 ZFP92A6NM28 416 aa12.16□□□□□ -0.46
PRNP-201ENST00000379440 FAM90A9PA6NNJ1 464 aa12.16□□□□□ -0.46
PRNP-201ENST00000379440 CCL21O00585 134 aa12.16□□□□□ -0.46
PRNP-201ENST00000379440 KIR2DS2P43631 304 aa12.16□□□□□ -0.46
PRNP-201ENST00000379440 THBS3P49746 956 aa12.16□□□□□ -0.46
PRNP-201ENST00000379440 GNB2P62879 340 aa12.16□□□□□ -0.46
PRNP-201ENST00000379440 CDSNQ15517 529 aa12.16□□□□□ -0.46
PRNP-201ENST00000379440 TMEM200BQ69YZ2 307 aa12.16□□□□□ -0.46
PRNP-201ENST00000379440 SLC25A48Q6ZT89 311 aaKnown RBP12.16□□□□□ -0.46
PRNP-201ENST00000379440 RPP25LQ8N5L8 163 aaKnown RBP12.16□□□□□ -0.46
PRNP-201ENST00000379440 MBD3L1Q8WWY6 194 aa12.16□□□□□ -0.46
PRNP-201ENST00000379440 SMDT1Q9H4I9 107 aa12.16□□□□□ -0.46
PRNP-201ENST00000379440 HEYLQ9NQ87 328 aaPredicted RBP12.16□□□□□ -0.46
PRNP-201ENST00000379440 HMGB3O15347 200 aaKnown RBP12.16□□□□□ -0.46
PRNP-201ENST00000379440 CD3EP07766 207 aa12.16□□□□□ -0.46
PRNP-201ENST00000379440 MYOD1P15172 320 aa12.16□□□□□ -0.46
PRNP-201ENST00000379440 ABHD12Q8N2K0 398 aa12.16□□□□□ -0.46
PRNP-201ENST00000379440 CYB561D1Q8N8Q1 229 aa12.16□□□□□ -0.46
PRNP-201ENST00000379440 ALKBH7Q9BT30 221 aaPredicted RBP12.16□□□□□ -0.46
PRNP-201ENST00000379440 RRHO14718 337 aa12.15□□□□□ -0.46
PRNP-201ENST00000379440 IL6RP08887 468 aaPredicted RBP12.15□□□□□ -0.46
PRNP-201ENST00000379440 CT45A6P0DMU7 189 aa12.15□□□□□ -0.46
PRNP-201ENST00000379440 CT45A5P0DMU8 189 aa12.15□□□□□ -0.46
PRNP-201ENST00000379440 CT45A7P0DMV0 189 aa12.15□□□□□ -0.46
PRNP-201ENST00000379440 VDAC2P45880 294 aaPredicted RBP12.15□□□□□ -0.46
PRNP-201ENST00000379440 OR4A47Q6IF82 309 aa12.15□□□□□ -0.46
PRNP-201ENST00000379440 ZNF705AQ6ZN79 300 aaPredicted RBP12.15□□□□□ -0.46
PRNP-201ENST00000379440 CENPVQ7Z7K6 275 aaPredicted RBP12.15□□□□□ -0.46
PRNP-201ENST00000379440 CTSZQ9UBR2 303 aa12.15□□□□□ -0.46
PRNP-201ENST00000379440 ARFGEF3Q5TH69 2177 aa12.15□□□□□ -0.46
PRNP-201ENST00000379440 TNFRSF13BO14836 293 aaPredicted RBP12.15□□□□□ -0.46
PRNP-201ENST00000379440 APOBEC3AP31941 199 aaPredicted RBP12.15□□□□□ -0.46
PRNP-201ENST00000379440 KLRB1Q12918 225 aa12.15□□□□□ -0.46
PRNP-201ENST00000379440 NPCDR1Q9BY65 106 aa12.15□□□□□ -0.46
PRNP-201ENST00000379440 MS4A5Q9H3V2 200 aa12.15□□□□□ -0.46
PRNP-201ENST00000379440 TIMM9Q9Y5J7 89 aa12.15□□□□□ -0.46
PRNP-201ENST00000379440 NBASA2RRP1 2371 aa12.15□□□□□ -0.46
PRNP-201ENST00000379440 LOC102723971A0A1B0GUV8 181 aa12.14□□□□□ -0.47
PRNP-201ENST00000379440 IGKV1-16P04430 117 aa12.14□□□□□ -0.47
PRNP-201ENST00000379440 VWC2Q2TAL6 325 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms