RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 LINC00305Q7Z4B0 112 aa9.63□□□□□ -0.87
PTCHD1-201ENST00000379361 WNT10AQ9GZT5 417 aa9.63□□□□□ -0.87
PTCHD1-201ENST00000379361 PTGDSP41222 190 aa9.63□□□□□ -0.87
PTCHD1-201ENST00000379361 C1QTNF12Q5T7M4 302 aa9.63□□□□□ -0.87
PTCHD1-201ENST00000379361 JPT1Q9UK76 154 aa9.63□□□□□ -0.87
PTCHD1-201ENST00000379361 TRPM3Q9HCF6 1732 aaPredicted RBP9.63□□□□□ -0.87
PTCHD1-201ENST00000379361 ZNF415Q09FC8 603 aa9.63□□□□□ -0.87
PTCHD1-201ENST00000379361 PCOLCEQ15113 449 aa9.63□□□□□ -0.87
PTCHD1-201ENST00000379361 FAM27BQ5VT28 67 aa9.63□□□□□ -0.87
PTCHD1-201ENST00000379361 SLIRPQ9GZT3 109 aaKnown RBP9.63□□□□□ -0.87
PTCHD1-201ENST00000379361 LGALS1P09382 135 aaKnown RBP9.63□□□□□ -0.87
PTCHD1-201ENST00000379361 C8orf88P0DMB2 117 aa9.63□□□□□ -0.87
PTCHD1-201ENST00000379361 IGLV3-16A0A075B6K0 115 aa9.63□□□□□ -0.87
PTCHD1-201ENST00000379361 HSPE1P61604 102 aaKnown RBP9.63□□□□□ -0.87
PTCHD1-201ENST00000379361 MORN3Q6PF18 240 aaPredicted RBP9.63□□□□□ -0.87
PTCHD1-201ENST00000379361 ASCL4Q6XD76 172 aa9.63□□□□□ -0.87
PTCHD1-201ENST00000379361 SAXO1Q8IYX7 474 aa9.63□□□□□ -0.87
PTCHD1-201ENST00000379361 TNRC6CQ9HCJ0 1690 aaKnown RBP9.63□□□□□ -0.87
PTCHD1-201ENST00000379361 CTDSPLO15194 276 aa9.63□□□□□ -0.87
PTCHD1-201ENST00000379361 Q6AWC8 147 aa9.63□□□□□ -0.87
PTCHD1-201ENST00000379361 SEPSECSQ9HD40 501 aaKnown RBP9.63□□□□□ -0.87
PTCHD1-201ENST00000379361 TRAV8-6A0A0B4J262 113 aa9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 C19orf67A6NJJ6 358 aa9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 NDUFA3O95167 84 aa9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 SUMO4Q6EEV6 95 aa9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 MARVELD1Q9BSK0 173 aa9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 JPT2Q9H910 190 aa9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 TRAV8-2A0A0B4J237 113 aa9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 MUC1P15941 1255 aaPredicted RBP9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 OTX1P32242 354 aaPredicted RBP9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 C8orf46Q8TAG6 207 aa9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 SDHCQ99643 169 aaPredicted RBP9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 COL22A1Q8NFW1 1626 aaPredicted RBP9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 TRAV12-3A0A0B4J271 114 aa9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 PROB1E7EW31 1015 aa9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 NAPSAO96009 420 aa9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 OVOL2Q9BRP0 275 aa9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 PKIBQ9C010 78 aa9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 CD8AP01732 235 aa9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 CD7P09564 240 aa9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 RPL34P49207 117 aaKnown RBP9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 INSL4Q14641 139 aa9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 C7orf69Q9H7B7 122 aa9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 ABCA12Q86UK0 2595 aa9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 SPINK2P20155 84 aa9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 DMKNQ6E0U4 476 aaPredicted RBP9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 HIST1H2BAQ96A08 127 aa9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 ZNF703Q9H7S9 590 aaPredicted RBP9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 AGAP20933 346 aa9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 BIVMQ86UB2 503 aa9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 MZB1Q8WU39 189 aa9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 NSUN5P1Q3KNT7 163 aa9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 COX14Q96I36 57 aa9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 ADARB2-AS1A8MUL3 147 aa9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 CBLN3Q6UW01 205 aa9.62□□□□□ -0.87
PTCHD1-201ENST00000379361 PPP1R27Q86WC6 154 aa9.61□□□□□ -0.87
PTCHD1-201ENST00000379361 HOGA1Q86XE5 327 aa9.61□□□□□ -0.87
PTCHD1-201ENST00000379361 IGHV3OR16-10A0A075B7F0 116 aa9.61□□□□□ -0.87
PTCHD1-201ENST00000379361 DMRTA2Q96SC8 542 aa9.61□□□□□ -0.87
PTCHD1-201ENST00000379361 CYSLTR1Q9Y271 337 aa9.61□□□□□ -0.87
PTCHD1-201ENST00000379361 MOSP00540 346 aa9.61□□□□□ -0.87
PTCHD1-201ENST00000379361 C9orf40Q8IXQ3 194 aa9.61□□□□□ -0.87
PTCHD1-201ENST00000379361 SPCS1Q9Y6A9 102 aa9.61□□□□□ -0.87
PTCHD1-201ENST00000379361 NPIPB8E9PQR5 432 aa9.61□□□□□ -0.87
PTCHD1-201ENST00000379361 NPIPB9F8W1W9 429 aa9.61□□□□□ -0.87
PTCHD1-201ENST00000379361 NPIPB7O75200 414 aa9.61□□□□□ -0.87
PTCHD1-201ENST00000379361 SRSF6Q13247 344 aaKnown RBP9.61□□□□□ -0.87
PTCHD1-201ENST00000379361 KIAA1644Q3SXP7 199 aa9.61□□□□□ -0.87
PTCHD1-201ENST00000379361 SCARF2Q96GP6 870 aaPredicted RBP9.61□□□□□ -0.87
PTCHD1-201ENST00000379361 WFIKKN1Q96NZ8 548 aa9.61□□□□□ -0.87
PTCHD1-201ENST00000379361 IGHV3-66A0A0C4DH42 116 aa9.61□□□□□ -0.87
PTCHD1-201ENST00000379361 VAX1Q5SQQ9 334 aa9.61□□□□□ -0.87
PTCHD1-201ENST00000379361 METRNQ9UJH8 293 aa9.61□□□□□ -0.87
PTCHD1-201ENST00000379361 IGKV3D-20A0A0C4DH25 116 aa9.61□□□□□ -0.87
PTCHD1-201ENST00000379361 GPX4P36969 197 aaPredicted RBP9.61□□□□□ -0.87
PTCHD1-201ENST00000379361 TMEM222Q9H0R3 208 aa9.61□□□□□ -0.87
PTCHD1-201ENST00000379361 LAMTOR3Q9UHA4 124 aa9.61□□□□□ -0.87
PTCHD1-201ENST00000379361 CA7P43166 264 aa9.61□□□□□ -0.87
PTCHD1-201ENST00000379361 FLRT3Q9NZU0 649 aa9.61□□□□□ -0.87
PTCHD1-201ENST00000379361 CISD3P0C7P0 127 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 SLC25A28Q96A46 364 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 PLSCR2Q9NRY7 297 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 IGHV4-39P01824 125 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 C1QL3Q5VWW1 255 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 MIC13Q5XKP0 118 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 TAF15Q92804 592 aaKnown RBP eCLIP9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 TGFAP01135 160 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 NOVP48745 357 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 DEFB121Q5J5C9 76 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 ZNF721Q8TF20 911 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 TMEM54Q969K7 222 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 DLL3Q9NYJ7 618 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 RIPPLY2Q5TAB7 128 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 C7orf77A4D0Y5 90 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 SRIP30626 198 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 DPM3Q9P2X0 92 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 FAM90A10PA6NDY2 464 aa9.6□□□□□ -0.87
PTCHD1-201ENST00000379361 FAM90A18PA6NE21 464 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms