RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 RGS10O43665 173 aa13.09□□□□□ -0.31
PDLIM4-202ENST00000379018 MYL9P24844 172 aa13.09□□□□□ -0.31
PDLIM4-202ENST00000379018 EIF4EBP1Q13541 118 aaPredicted RBP13.09□□□□□ -0.31
PDLIM4-202ENST00000379018 CNPY1Q3B7I2 92 aa13.09□□□□□ -0.31
PDLIM4-202ENST00000379018 SPAG16Q8N0X2 631 aa13.09□□□□□ -0.31
PDLIM4-202ENST00000379018 OR10W1Q8NGF6 305 aa13.09□□□□□ -0.31
PDLIM4-202ENST00000379018 COMMD5Q9GZQ3 224 aa13.09□□□□□ -0.31
PDLIM4-202ENST00000379018 ACOT13Q9NPJ3 140 aa13.09□□□□□ -0.31
PDLIM4-202ENST00000379018 BET1LQ9NYM9 111 aa13.09□□□□□ -0.31
PDLIM4-202ENST00000379018 PTBP1P26599 531 aaKnown RBP eCLIP13.08□□□□□ -0.32
PDLIM4-202ENST00000379018 GNG2P59768 71 aa13.08□□□□□ -0.32
PDLIM4-202ENST00000379018 SLC25A24Q6NUK1 477 aa13.08□□□□□ -0.32
PDLIM4-202ENST00000379018 CNIH2Q6PI25 160 aa13.08□□□□□ -0.32
PDLIM4-202ENST00000379018 ZNF773Q6PK81 442 aa13.08□□□□□ -0.32
PDLIM4-202ENST00000379018 ZNF66Q6ZN08 573 aa13.08□□□□□ -0.32
PDLIM4-202ENST00000379018 OR11H2Q8NH07 326 aa13.08□□□□□ -0.32
PDLIM4-202ENST00000379018 OR4A5Q8NH83 315 aa13.08□□□□□ -0.32
PDLIM4-202ENST00000379018 C2CD4CQ8TF44 421 aa13.08□□□□□ -0.32
PDLIM4-202ENST00000379018 MGLLQ99685 303 aa13.08□□□□□ -0.32
PDLIM4-202ENST00000379018 MFFQ9GZY8 342 aa13.08□□□□□ -0.32
PDLIM4-202ENST00000379018 CSTL1Q9H114 145 aa13.08□□□□□ -0.32
PDLIM4-202ENST00000379018 CCL28Q9NRJ3 127 aa13.08□□□□□ -0.32
PDLIM4-202ENST00000379018 TPRKBQ9Y3C4 175 aa13.08□□□□□ -0.32
PDLIM4-202ENST00000379018 IGHV3-49A0A0A0MS15 119 aa13.07□□□□□ -0.32
PDLIM4-202ENST00000379018 MPTX1A8MV57 137 aa13.07□□□□□ -0.32
PDLIM4-202ENST00000379018 SULT1C2O00338 296 aa13.07□□□□□ -0.32
PDLIM4-202ENST00000379018 XRCC3O43542 346 aa13.07□□□□□ -0.32
PDLIM4-202ENST00000379018 PTHLHP12272 177 aa13.07□□□□□ -0.32
PDLIM4-202ENST00000379018 RAB3BP20337 219 aa13.07□□□□□ -0.32
PDLIM4-202ENST00000379018 KLK9Q2XQG4 91 aa13.07□□□□□ -0.32
PDLIM4-202ENST00000379018 HACD4Q5VWC8 232 aa13.07□□□□□ -0.32
PDLIM4-202ENST00000379018 DMBX1Q8NFW5 382 aa13.07□□□□□ -0.32
PDLIM4-202ENST00000379018 CHRDL1Q9BU40 450 aa13.07□□□□□ -0.32
PDLIM4-202ENST00000379018 HINT2Q9BX68 163 aa13.07□□□□□ -0.32
PDLIM4-202ENST00000379018 VCX3AQ9NNX9 186 aa13.07□□□□□ -0.32
PDLIM4-202ENST00000379018 KLK9Q9UKQ9 250 aa13.07□□□□□ -0.32
PDLIM4-202ENST00000379018 IGLL5B9A064 214 aa13.06□□□□□ -0.32
PDLIM4-202ENST00000379018 OR13C7P0DN81 318 aa13.06□□□□□ -0.32
PDLIM4-202ENST00000379018 ARL6IP1Q15041 203 aa13.06□□□□□ -0.32
PDLIM4-202ENST00000379018 Q56UQ5 140 aa13.06□□□□□ -0.32
PDLIM4-202ENST00000379018 VN1R17PQ8TDU5 208 aa13.06□□□□□ -0.32
PDLIM4-202ENST00000379018 BSCL2Q96G97 398 aaPredicted RBP13.06□□□□□ -0.32
PDLIM4-202ENST00000379018 QTRT1Q9BXR0 403 aaKnown RBP13.06□□□□□ -0.32
PDLIM4-202ENST00000379018 ANXA10Q9UJ72 324 aa13.06□□□□□ -0.32
PDLIM4-202ENST00000379018 VPS13DQ5THJ4 4388 aa13.06□□□□□ -0.32
PDLIM4-202ENST00000379018 NDUFA4O00483 81 aa13.05□□□□□ -0.32
PDLIM4-202ENST00000379018 UPK2O00526 184 aa13.05□□□□□ -0.32
PDLIM4-202ENST00000379018 CYB5BO43169 146 aa13.05□□□□□ -0.32
PDLIM4-202ENST00000379018 FCER2P06734 321 aa13.05□□□□□ -0.32
PDLIM4-202ENST00000379018 FXYD4P59646 89 aa13.05□□□□□ -0.32
PDLIM4-202ENST00000379018 ARPC4P59998 168 aa13.05□□□□□ -0.32
PDLIM4-202ENST00000379018 SSX1Q16384 188 aa13.05□□□□□ -0.32
PDLIM4-202ENST00000379018 GBGT1Q8N5D6 347 aa13.05□□□□□ -0.32
PDLIM4-202ENST00000379018 GDPD1Q8N9F7 314 aa13.05□□□□□ -0.32
PDLIM4-202ENST00000379018 OR13F1Q8NGS4 319 aa13.05□□□□□ -0.32
PDLIM4-202ENST00000379018 OR51H1Q8NH63 302 aa13.05□□□□□ -0.32
PDLIM4-202ENST00000379018 RNF2Q99496 336 aa13.05□□□□□ -0.32
PDLIM4-202ENST00000379018 BCL7BQ9BQE9 202 aa13.05□□□□□ -0.32
PDLIM4-202ENST00000379018 DCSTAMPQ9H295 470 aa13.05□□□□□ -0.32
PDLIM4-202ENST00000379018 TMEM140Q9NV12 185 aa13.05□□□□□ -0.32
PDLIM4-202ENST00000379018 DNAH6Q9C0G6 4158 aa13.05□□□□□ -0.32
PDLIM4-202ENST00000379018 IGHV3OR16-13A0A075B7E8 117 aa13.04□□□□□ -0.32
PDLIM4-202ENST00000379018 IGHV3-74A0A0B4J1X5 117 aa13.04□□□□□ -0.32
PDLIM4-202ENST00000379018 TRAV1-2A0A0B4J238 106 aa13.04□□□□□ -0.32
PDLIM4-202ENST00000379018 CA1P00915 261 aaPredicted RBP13.04□□□□□ -0.32
PDLIM4-202ENST00000379018 FCGR2CP31995 323 aa13.04□□□□□ -0.32
PDLIM4-202ENST00000379018 AIFM2Q9BRQ8 373 aa13.04□□□□□ -0.32
PDLIM4-202ENST00000379018 C11orf68Q9H3H3 251 aaKnown RBP13.04□□□□□ -0.32
PDLIM4-202ENST00000379018 C21orf62Q9NYP8 219 aa13.04□□□□□ -0.32
PDLIM4-202ENST00000379018 RSL24D1Q9UHA3 163 aaKnown RBP13.04□□□□□ -0.32
PDLIM4-202ENST00000379018 SSX5O60225 188 aa13.03□□□□□ -0.32
PDLIM4-202ENST00000379018 YIF1AO95070 293 aa13.03□□□□□ -0.32
PDLIM4-202ENST00000379018 NQO2P16083 231 aa13.03□□□□□ -0.32
PDLIM4-202ENST00000379018 TAS2R31P59538 309 aa13.03□□□□□ -0.32
PDLIM4-202ENST00000379018 WT1-ASQ06250 92 aa13.03□□□□□ -0.32
PDLIM4-202ENST00000379018 CATR1Q13166 79 aa13.03□□□□□ -0.32
PDLIM4-202ENST00000379018 C22orf42Q6IC83 251 aa13.03□□□□□ -0.32
PDLIM4-202ENST00000379018 GPR141Q7Z602 305 aa13.03□□□□□ -0.32
PDLIM4-202ENST00000379018 NR2C2APQ86WQ0 139 aa13.03□□□□□ -0.32
PDLIM4-202ENST00000379018 SLC5A7Q9GZV3 580 aa13.03□□□□□ -0.32
PDLIM4-202ENST00000379018 DUSP21Q9H596 190 aa13.03□□□□□ -0.32
PDLIM4-202ENST00000379018 HPRT1P00492 218 aa13.02□□□□□ -0.33
PDLIM4-202ENST00000379018 TRAPPC2P0DI81 140 aa13.02□□□□□ -0.33
PDLIM4-202ENST00000379018 TRAPPC2BP0DI82 140 aa13.02□□□□□ -0.33
PDLIM4-202ENST00000379018 ADMP35318 185 aa13.02□□□□□ -0.33
PDLIM4-202ENST00000379018 MFAP2P55001 183 aa13.02□□□□□ -0.33
PDLIM4-202ENST00000379018 AADACL3Q5VUY0 350 aa13.02□□□□□ -0.33
PDLIM4-202ENST00000379018 SPSB3Q6PJ21 355 aa13.02□□□□□ -0.33
PDLIM4-202ENST00000379018 TMEM17Q86X19 198 aa13.02□□□□□ -0.33
PDLIM4-202ENST00000379018 TMEM116Q8NCL8 245 aa13.02□□□□□ -0.33
PDLIM4-202ENST00000379018 SCARB1Q8WTV0 552 aa13.02□□□□□ -0.33
PDLIM4-202ENST00000379018 RHPN1-AS1Q9BWJ2 59 aa13.02□□□□□ -0.33
PDLIM4-202ENST00000379018 SMPXQ9UHP9 88 aa13.02□□□□□ -0.33
PDLIM4-202ENST00000379018 RYR1P21817 5038 aa13.02□□□□□ -0.33
PDLIM4-202ENST00000379018 CHEK1O14757 476 aa13.01□□□□□ -0.33
PDLIM4-202ENST00000379018 PPYP01298 95 aa13.01□□□□□ -0.33
PDLIM4-202ENST00000379018 SERPINE2P07093 398 aa13.01□□□□□ -0.33
PDLIM4-202ENST00000379018 PRSS48Q7RTY5 328 aa13.01□□□□□ -0.33
PDLIM4-202ENST00000379018 GVQW1Q8N7I0 195 aa13.01□□□□□ -0.33
PDLIM4-202ENST00000379018 SRSF8Q9BRL6 282 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms