RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 NUP210Q8TEM1 1887 aaPredicted RBP11.02□□□□□ -0.65
NPHP4-203ENST00000378169 HOXA4Q00056 320 aaPredicted RBP11.02□□□□□ -0.65
NPHP4-203ENST00000378169 HLA-DRB5Q30154 266 aa11.02□□□□□ -0.65
NPHP4-203ENST00000378169 CLEC2AQ6UVW9 174 aa11.02□□□□□ -0.65
NPHP4-203ENST00000378169 C20orf204Q6ZNR8 217 aa11.02□□□□□ -0.65
NPHP4-203ENST00000378169 FOXL2NBQ6ZUU3 175 aa11.02□□□□□ -0.65
NPHP4-203ENST00000378169 IGHV1-46P01743 117 aa11.02□□□□□ -0.65
NPHP4-203ENST00000378169 CCL20P78556 96 aa11.02□□□□□ -0.65
NPHP4-203ENST00000378169 LY6DQ14210 128 aa11.02□□□□□ -0.65
NPHP4-203ENST00000378169 C5orf17Q8NAS9 161 aa11.02□□□□□ -0.65
NPHP4-203ENST00000378169 SRRM5B3KS81 715 aa11.01□□□□□ -0.65
NPHP4-203ENST00000378169 OR4D5Q8NGN0 318 aa11.01□□□□□ -0.65
NPHP4-203ENST00000378169 OR4A5Q8NH83 315 aa11.01□□□□□ -0.65
NPHP4-203ENST00000378169 PITPNC1Q9UKF7 332 aa11.01□□□□□ -0.65
NPHP4-203ENST00000378169 CD24P25063 80 aa11.01□□□□□ -0.65
NPHP4-203ENST00000378169 FCGR2BP31994 310 aaPredicted RBP11.01□□□□□ -0.65
NPHP4-203ENST00000378169 FAM162BQ5T6X4 162 aa11.01□□□□□ -0.65
NPHP4-203ENST00000378169 FAM90A1Q86YD7 464 aa11.01□□□□□ -0.65
NPHP4-203ENST00000378169 RPRMLQ8N4K4 120 aa11.01□□□□□ -0.65
NPHP4-203ENST00000378169 GPR61Q9BZJ8 451 aa11.01□□□□□ -0.65
NPHP4-203ENST00000378169 IGHV3OR16-13A0A075B7E8 117 aa11.01□□□□□ -0.65
NPHP4-203ENST00000378169 IGHV3-74A0A0B4J1X5 117 aa11.01□□□□□ -0.65
NPHP4-203ENST00000378169 IL6RP08887 468 aaPredicted RBP11.01□□□□□ -0.65
NPHP4-203ENST00000378169 RPL30P62888 115 aaKnown RBP11.01□□□□□ -0.65
NPHP4-203ENST00000378169 UNQ5815/PRO19632Q6UWF5 114 aa11.01□□□□□ -0.65
NPHP4-203ENST00000378169 MLNRO43193 412 aa11.01□□□□□ -0.65
NPHP4-203ENST00000378169 HIST1H1EP10412 219 aaKnown RBP11.01□□□□□ -0.65
NPHP4-203ENST00000378169 IBA57Q5T440 356 aaKnown RBP11.01□□□□□ -0.65
NPHP4-203ENST00000378169 OSR1Q8TAX0 266 aaPredicted RBP11.01□□□□□ -0.65
NPHP4-203ENST00000378169 SRP19P09132 144 aaKnown RBP11□□□□□ -0.65
NPHP4-203ENST00000378169 DUTP33316 252 aaKnown RBP11□□□□□ -0.65
NPHP4-203ENST00000378169 CDKN1AP38936 164 aa11□□□□□ -0.65
NPHP4-203ENST00000378169 ZNF506Q5JVG8 444 aa11□□□□□ -0.65
NPHP4-203ENST00000378169 LRTM2Q8N967 370 aa11□□□□□ -0.65
NPHP4-203ENST00000378169 UFC1Q9Y3C8 167 aa11□□□□□ -0.65
NPHP4-203ENST00000378169 SLC25A15Q9Y619 301 aa11□□□□□ -0.65
NPHP4-203ENST00000378169 ZNF503-AS2A6NEH8 195 aa11□□□□□ -0.65
NPHP4-203ENST00000378169 YPEL1O60688 119 aa11□□□□□ -0.65
NPHP4-203ENST00000378169 AGAP20933 346 aa11□□□□□ -0.65
NPHP4-203ENST00000378169 ATP5J2P56134 94 aa11□□□□□ -0.65
NPHP4-203ENST00000378169 KIAA1644Q3SXP7 199 aa11□□□□□ -0.65
NPHP4-203ENST00000378169 WFDC3Q8IUB2 231 aa11□□□□□ -0.65
NPHP4-203ENST00000378169 YPEL2Q96QA6 119 aa11□□□□□ -0.65
NPHP4-203ENST00000378169 CARHSP1Q9Y2V2 147 aaKnown RBP11□□□□□ -0.65
NPHP4-203ENST00000378169 LINC00312Q9Y6C7 94 aa11□□□□□ -0.65
NPHP4-203ENST00000378169 CCDC168Q8NDH2 2452 aa11□□□□□ -0.65
NPHP4-203ENST00000378169 CORTO00230 105 aa11□□□□□ -0.65
NPHP4-203ENST00000378169 FAM106CPP0CH98 169 aa11□□□□□ -0.65
NPHP4-203ENST00000378169 GCHFRP30047 84 aa11□□□□□ -0.65
NPHP4-203ENST00000378169 OR51G1Q8NGK1 321 aa11□□□□□ -0.65
NPHP4-203ENST00000378169 GRAMD2BQ96HH9 432 aa11□□□□□ -0.65
NPHP4-203ENST00000378169 WFIKKN1Q96NZ8 548 aa11□□□□□ -0.65
NPHP4-203ENST00000378169 CYTL1Q9NRR1 136 aa11□□□□□ -0.65
NPHP4-203ENST00000378169 IGHV3OR16-8A0A075B7F1 116 aa10.99□□□□□ -0.65
NPHP4-203ENST00000378169 ELOA3CA0A087WX78 387 aaPredicted RBP10.99□□□□□ -0.65
NPHP4-203ENST00000378169 DNASE2O00115 360 aaPredicted RBP10.99□□□□□ -0.65
NPHP4-203ENST00000378169 CGAP01215 116 aa10.99□□□□□ -0.65
NPHP4-203ENST00000378169 LCN2P80188 198 aa10.99□□□□□ -0.65
NPHP4-203ENST00000378169 RNASE6Q93091 150 aaKnown RBP10.99□□□□□ -0.65
NPHP4-203ENST00000378169 CGB1A6NKQ9 187 aa10.99□□□□□ -0.65
NPHP4-203ENST00000378169 CDK2AP1O14519 115 aa10.99□□□□□ -0.65
NPHP4-203ENST00000378169 TM4SF5O14894 197 aa10.99□□□□□ -0.65
NPHP4-203ENST00000378169 SAA1P0DJI8 122 aaPredicted RBP10.99□□□□□ -0.65
NPHP4-203ENST00000378169 HTN1P15515 57 aa10.99□□□□□ -0.65
NPHP4-203ENST00000378169 PPOXP50336 477 aa10.99□□□□□ -0.65
NPHP4-203ENST00000378169 ZNF474Q6S9Z5 364 aaPredicted RBP10.99□□□□□ -0.65
NPHP4-203ENST00000378169 RABAC1Q9UI14 185 aa10.99□□□□□ -0.65
NPHP4-203ENST00000378169 SMIM6P0DI80 62 aa10.99□□□□□ -0.65
NPHP4-203ENST00000378169 TIMP3P35625 211 aa10.99□□□□□ -0.65
NPHP4-203ENST00000378169 ATP5G3P48201 142 aa10.99□□□□□ -0.65
NPHP4-203ENST00000378169 HERPUD1Q15011 391 aa10.99□□□□□ -0.65
NPHP4-203ENST00000378169 LY6EQ16553 131 aa10.99□□□□□ -0.65
NPHP4-203ENST00000378169 GCSAMLQ5JQS6 135 aa10.99□□□□□ -0.65
NPHP4-203ENST00000378169 CD177Q8N6Q3 437 aa10.99□□□□□ -0.65
NPHP4-203ENST00000378169 SSBP3Q9BWW4 388 aaPredicted RBP10.99□□□□□ -0.65
NPHP4-203ENST00000378169 CHODLQ9H9P2 273 aa10.99□□□□□ -0.65
NPHP4-203ENST00000378169 TMEM250H0YL14 139 aa10.98□□□□□ -0.65
NPHP4-203ENST00000378169 OR9G9P0C7N8 305 aa10.98□□□□□ -0.65
NPHP4-203ENST00000378169 SMIM17P0DL12 118 aa10.98□□□□□ -0.65
NPHP4-203ENST00000378169 PF4V1P10720 104 aa10.98□□□□□ -0.65
NPHP4-203ENST00000378169 SRP14P37108 136 aaKnown RBP10.98□□□□□ -0.65
NPHP4-203ENST00000378169 BPIFA4PQ86YQ2 179 aa10.98□□□□□ -0.65
NPHP4-203ENST00000378169 TXNDC17Q9BRA2 123 aa10.98□□□□□ -0.65
NPHP4-203ENST00000378169 F5H697 171 aa10.98□□□□□ -0.65
NPHP4-203ENST00000378169 M0R2Z0 102 aa10.98□□□□□ -0.65
NPHP4-203ENST00000378169 FGF16O43320 207 aa10.98□□□□□ -0.65
NPHP4-203ENST00000378169 EIF4E3Q8N5X7 224 aaKnown RBP10.98□□□□□ -0.65
NPHP4-203ENST00000378169 KLHDC1Q8N7A1 406 aa10.98□□□□□ -0.65
NPHP4-203ENST00000378169 GATAD1Q8WUU5 269 aa10.98□□□□□ -0.65
NPHP4-203ENST00000378169 FAM122AQ96E09 287 aa10.98□□□□□ -0.65
NPHP4-203ENST00000378169 OR51M1Q9H341 326 aa10.98□□□□□ -0.65
NPHP4-203ENST00000378169 VSIRQ9H7M9 311 aa10.98□□□□□ -0.65
NPHP4-203ENST00000378169 KIAA1671Q9BY89 1806 aa10.98□□□□□ -0.65
NPHP4-203ENST00000378169 IGKV1-5P01602 117 aa10.98□□□□□ -0.65
NPHP4-203ENST00000378169 IGHG3P01860 377 aa10.98□□□□□ -0.65
NPHP4-203ENST00000378169 DNM1P46Q6ZS02 220 aa10.98□□□□□ -0.65
NPHP4-203ENST00000378169 COLCA1Q6ZS62 124 aa10.98□□□□□ -0.65
NPHP4-203ENST00000378169 ZNF383Q8NA42 475 aa10.98□□□□□ -0.65
NPHP4-203ENST00000378169 DPM3Q9P2X0 92 aa10.98□□□□□ -0.65
NPHP4-203ENST00000378169 Q6ZS92 163 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms