RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 MRPL30Q8TCC3 161 aaKnown RBP12.95□□□□□ -0.34
FXN-201ENST00000377270 PIGCQ92535 297 aa12.95□□□□□ -0.34
FXN-201ENST00000377270 GPR82Q96P67 336 aa12.95□□□□□ -0.34
FXN-201ENST00000377270 B4GALT7Q9UBV7 327 aa12.95□□□□□ -0.34
FXN-201ENST00000377270 CELSR3Q9NYQ7 3312 aa12.95□□□□□ -0.34
FXN-201ENST00000377270 PGPEP1LA6NFU8 196 aa12.95□□□□□ -0.34
FXN-201ENST00000377270 NXPH3O95157 252 aa12.95□□□□□ -0.34
FXN-201ENST00000377270 REG1AP05451 166 aa12.95□□□□□ -0.34
FXN-201ENST00000377270 NTF3P20783 257 aa12.95□□□□□ -0.34
FXN-201ENST00000377270 TMPRSS3P57727 454 aa12.95□□□□□ -0.34
FXN-201ENST00000377270 OR1C1Q15619 314 aa12.95□□□□□ -0.34
FXN-201ENST00000377270 TMEM42Q69YG0 159 aa12.95□□□□□ -0.34
FXN-201ENST00000377270 OR5A1Q8NGJ0 315 aa12.95□□□□□ -0.34
FXN-201ENST00000377270 OR52E5Q8NH55 327 aa12.95□□□□□ -0.34
FXN-201ENST00000377270 ZNF391Q9UJN7 358 aa12.95□□□□□ -0.34
FXN-201ENST00000377270 A0A087X0K7 114 aa12.94□□□□□ -0.34
FXN-201ENST00000377270 VDAC1P21796 283 aa12.94□□□□□ -0.34
FXN-201ENST00000377270 ZNF585BQ52M93 769 aa12.94□□□□□ -0.34
FXN-201ENST00000377270 SLC25A34Q6PIV7 304 aa12.94□□□□□ -0.34
FXN-201ENST00000377270 NEU4Q8WWR8 484 aaPredicted RBP12.94□□□□□ -0.34
FXN-201ENST00000377270 HSPB8Q9UJY1 196 aa12.94□□□□□ -0.34
FXN-201ENST00000377270 SAA2-SAA4A0A096LPE2 208 aa12.94□□□□□ -0.34
FXN-201ENST00000377270 A0A096LPE4 126 aa12.94□□□□□ -0.34
FXN-201ENST00000377270 IGKV1-12A0A0C4DH73 117 aa12.94□□□□□ -0.34
FXN-201ENST00000377270 A0A1W2PPZ6 126 aa12.94□□□□□ -0.34
FXN-201ENST00000377270 PRR33A8MZF0 331 aa12.94□□□□□ -0.34
FXN-201ENST00000377270 FCN1O00602 326 aa12.94□□□□□ -0.34
FXN-201ENST00000377270 IGKV1D-12P01611 117 aa12.94□□□□□ -0.34
FXN-201ENST00000377270 MAGEA5P43359 124 aa12.94□□□□□ -0.34
FXN-201ENST00000377270 RHOBP62745 196 aa12.94□□□□□ -0.34
FXN-201ENST00000377270 NMSQ5H8A3 153 aa12.94□□□□□ -0.34
FXN-201ENST00000377270 PLCXD3Q63HM9 321 aa12.94□□□□□ -0.34
FXN-201ENST00000377270 OR10AG1Q8NH19 301 aa12.94□□□□□ -0.34
FXN-201ENST00000377270 SPSB4Q96A44 273 aa12.94□□□□□ -0.34
FXN-201ENST00000377270 C21orf140B9A014 251 aa12.93□□□□□ -0.34
FXN-201ENST00000377270 CDX4O14627 284 aaPredicted RBP12.93□□□□□ -0.34
FXN-201ENST00000377270 ZNHIT1O43257 154 aa12.93□□□□□ -0.34
FXN-201ENST00000377270 NPY1RP25929 384 aa12.93□□□□□ -0.34
FXN-201ENST00000377270 FABP6P51161 128 aa12.93□□□□□ -0.34
FXN-201ENST00000377270 SERF2P84101 59 aa12.93□□□□□ -0.34
FXN-201ENST00000377270 PIGYQ3MUY2 71 aa12.93□□□□□ -0.34
FXN-201ENST00000377270 ASCL4Q6XD76 172 aa12.93□□□□□ -0.34
FXN-201ENST00000377270 OR5P3Q8WZ94 311 aa12.93□□□□□ -0.34
FXN-201ENST00000377270 IGKV3D-15A0A087WSY6 115 aa12.93□□□□□ -0.34
FXN-201ENST00000377270 VENTXO95231 258 aa12.93□□□□□ -0.34
FXN-201ENST00000377270 MT-CO3P00414 261 aa12.93□□□□□ -0.34
FXN-201ENST00000377270 SPATA12Q7Z6I5 190 aa12.93□□□□□ -0.34
FXN-201ENST00000377270 TBC1D26Q86UD7 250 aa12.93□□□□□ -0.34
FXN-201ENST00000377270 OSR2Q8N2R0 312 aa12.93□□□□□ -0.34
FXN-201ENST00000377270 NDFIP1Q9BT67 221 aa12.93□□□□□ -0.34
FXN-201ENST00000377270 QTRT1Q9BXR0 403 aaKnown RBP12.93□□□□□ -0.34
FXN-201ENST00000377270 TTTY12Q9BZ98 90 aa12.93□□□□□ -0.34
FXN-201ENST00000377270 FREM1Q5H8C1 2179 aa12.93□□□□□ -0.34
FXN-201ENST00000377270 PPYP01298 95 aa12.92□□□□□ -0.34
FXN-201ENST00000377270 THBS3P49746 956 aa12.92□□□□□ -0.34
FXN-201ENST00000377270 OR4F5Q8NH21 305 aa12.92□□□□□ -0.34
FXN-201ENST00000377270 LHX4Q969G2 390 aa12.92□□□□□ -0.34
FXN-201ENST00000377270 C1QTNF5Q9BXJ0 243 aa12.92□□□□□ -0.34
FXN-201ENST00000377270 PRRG4Q9BZD6 226 aa12.92□□□□□ -0.34
FXN-201ENST00000377270 CLCF1Q9UBD9 225 aa12.92□□□□□ -0.34
FXN-201ENST00000377270 SPCS1Q9Y6A9 102 aa12.92□□□□□ -0.34
FXN-201ENST00000377270 SHANK1Q9Y566 2161 aa12.92□□□□□ -0.34
FXN-201ENST00000377270 ZNF816-ZNF321PA0A0X1KG74 233 aa12.92□□□□□ -0.34
FXN-201ENST00000377270 H3BP45 60 aa12.92□□□□□ -0.34
FXN-201ENST00000377270 J3QR89 54 aa12.92□□□□□ -0.34
FXN-201ENST00000377270 PSMB3P49720 205 aa12.92□□□□□ -0.34
FXN-201ENST00000377270 PLGLB1Q02325 96 aa12.92□□□□□ -0.34
FXN-201ENST00000377270 ATP5G2Q06055 141 aa12.92□□□□□ -0.34
FXN-201ENST00000377270 PDCD1Q15116 288 aa12.92□□□□□ -0.34
FXN-201ENST00000377270 OR8B8Q15620 311 aa12.92□□□□□ -0.34
FXN-201ENST00000377270 DHRS13Q6UX07 377 aa12.92□□□□□ -0.34
FXN-201ENST00000377270 FOXI2Q6ZQN5 318 aa12.92□□□□□ -0.34
FXN-201ENST00000377270 WDR61Q9GZS3 305 aaKnown RBP12.92□□□□□ -0.34
FXN-201ENST00000377270 MBNL3Q9NUK0 354 aaKnown RBP12.92□□□□□ -0.34
FXN-201ENST00000377270 MLNRO43193 412 aa12.92□□□□□ -0.34
FXN-201ENST00000377270 FOXG1P55316 489 aaPredicted RBP12.92□□□□□ -0.34
FXN-201ENST00000377270 PLA2G2CQ5R387 149 aa12.92□□□□□ -0.34
FXN-201ENST00000377270 MRPL54Q6P161 138 aaKnown RBP12.92□□□□□ -0.34
FXN-201ENST00000377270 RAX2Q96IS3 184 aa12.92□□□□□ -0.34
FXN-201ENST00000377270 COMMD5Q9GZQ3 224 aa12.92□□□□□ -0.34
FXN-201ENST00000377270 SLC39A9Q9NUM3 307 aa12.92□□□□□ -0.34
FXN-201ENST00000377270 KCNIP1Q9NZI2 227 aa12.92□□□□□ -0.34
FXN-201ENST00000377270 LRP5LA4QPB2 252 aa12.91□□□□□ -0.34
FXN-201ENST00000377270 USF1P22415 310 aaPredicted RBP12.91□□□□□ -0.34
FXN-201ENST00000377270 UQCRFS1P47985 274 aa12.91□□□□□ -0.34
FXN-201ENST00000377270 SRSF6Q13247 344 aaKnown RBP12.91□□□□□ -0.34
FXN-201ENST00000377270 TRAT1Q6PIZ9 186 aa12.91□□□□□ -0.34
FXN-201ENST00000377270 TMEM251Q8N6I4 163 aa12.91□□□□□ -0.34
FXN-201ENST00000377270 PRDM14Q9GZV8 571 aa12.91□□□□□ -0.34
FXN-201ENST00000377270 ZNF407Q9C0G0 2248 aa12.91□□□□□ -0.34
FXN-201ENST00000377270 MED13Q9UHV7 2174 aa12.91□□□□□ -0.34
FXN-201ENST00000377270 ZNF324BQ6AW86 544 aaPredicted RBP12.91□□□□□ -0.34
FXN-201ENST00000377270 VCX2Q9H322 139 aa12.91□□□□□ -0.34
FXN-201ENST00000377270 DNAJC13O75165 2243 aa12.9□□□□□ -0.34
FXN-201ENST00000377270 A0A0G2JLM5 398 aa12.9□□□□□ -0.34
FXN-201ENST00000377270 FRMD6-AS1P0C7T7 363 aa12.9□□□□□ -0.34
FXN-201ENST00000377270 IER3P46695 156 aa12.9□□□□□ -0.34
FXN-201ENST00000377270 R4GN57 208 aa12.9□□□□□ -0.34
FXN-201ENST00000377270 C5orf49A4QMS7 147 aa12.9□□□□□ -0.35
FXN-201ENST00000377270 SNURFLB1AK76 121 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms