RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 RPS20P60866 119 aaKnown RBP9.27□□□□□ -0.92
MDC1-201ENST00000376406 LINC00312Q9Y6C7 94 aa9.27□□□□□ -0.92
MDC1-201ENST00000376406 EIF3GO75821 320 aaKnown RBP eCLIP9.27□□□□□ -0.93
MDC1-201ENST00000376406 FAM27E3Q08E93 113 aa9.27□□□□□ -0.93
MDC1-201ENST00000376406 GLRX5Q86SX6 157 aa9.27□□□□□ -0.93
MDC1-201ENST00000376406 OSR1Q8TAX0 266 aaPredicted RBP9.27□□□□□ -0.93
MDC1-201ENST00000376406 HSPB9Q9BQS6 159 aa9.27□□□□□ -0.93
MDC1-201ENST00000376406 IGHV1-2P23083 117 aa9.27□□□□□ -0.93
MDC1-201ENST00000376406 CMC4P56277 68 aaPredicted RBP9.27□□□□□ -0.93
MDC1-201ENST00000376406 SPANXN1Q5VSR9 72 aa9.27□□□□□ -0.93
MDC1-201ENST00000376406 LEAP2Q969E1 77 aa9.27□□□□□ -0.93
MDC1-201ENST00000376406 MDKP21741 143 aaPredicted RBP9.27□□□□□ -0.93
MDC1-201ENST00000376406 IGHV3-72A0A0B4J1Y9 119 aa9.27□□□□□ -0.93
MDC1-201ENST00000376406 RNF222A6NCQ9 220 aa9.27□□□□□ -0.93
MDC1-201ENST00000376406 SLC25A17O43808 307 aa9.27□□□□□ -0.93
MDC1-201ENST00000376406 LYZL4Q96KX0 146 aa9.27□□□□□ -0.93
MDC1-201ENST00000376406 LOC389332A0A1B0GUA5 103 aa9.27□□□□□ -0.93
MDC1-201ENST00000376406 PGPA6NDG6 321 aa9.27□□□□□ -0.93
MDC1-201ENST00000376406 NPIPB6E9PJ23 425 aa9.27□□□□□ -0.93
MDC1-201ENST00000376406 SPATA45Q537H7 98 aa9.27□□□□□ -0.93
MDC1-201ENST00000376406 GFI1Q99684 422 aa9.27□□□□□ -0.93
MDC1-201ENST00000376406 SMAD7O15105 426 aaKnown RBP9.26□□□□□ -0.93
MDC1-201ENST00000376406 MYOD1P15172 320 aa9.26□□□□□ -0.93
MDC1-201ENST00000376406 ZNF385CQ66K41 422 aaPredicted RBP9.26□□□□□ -0.93
MDC1-201ENST00000376406 TNFRSF14Q92956 283 aa9.26□□□□□ -0.93
MDC1-201ENST00000376406 C7orf69Q9H7B7 122 aa9.26□□□□□ -0.93
MDC1-201ENST00000376406 YAE1D1Q9NRH1 226 aa9.26□□□□□ -0.93
MDC1-201ENST00000376406 SEMA5BQ9P283 1151 aa9.26□□□□□ -0.93
MDC1-201ENST00000376406 HSPB7Q9UBY9 170 aa9.26□□□□□ -0.93
MDC1-201ENST00000376406 SHANK1Q9Y566 2161 aa9.26□□□□□ -0.93
MDC1-201ENST00000376406 TMEM250H0YL14 139 aa9.26□□□□□ -0.93
MDC1-201ENST00000376406 RND2P52198 227 aa9.26□□□□□ -0.93
MDC1-201ENST00000376406 PMCHL1Q16048 86 aa9.26□□□□□ -0.93
MDC1-201ENST00000376406 PRSS22Q9GZN4 317 aa9.26□□□□□ -0.93
MDC1-201ENST00000376406 IFITM10A6NMD0 228 aa9.26□□□□□ -0.93
MDC1-201ENST00000376406 TGFAP01135 160 aa9.26□□□□□ -0.93
MDC1-201ENST00000376406 LINC00518Q8N0U6 118 aa9.26□□□□□ -0.93
MDC1-201ENST00000376406 TMEM190Q8WZ59 177 aa9.26□□□□□ -0.93
MDC1-201ENST00000376406 J3KRW8 73 aa9.26□□□□□ -0.93
MDC1-201ENST00000376406 WDR25Q64LD2 544 aaPredicted RBP9.26□□□□□ -0.93
MDC1-201ENST00000376406 OR4B1Q8NGF8 309 aa9.26□□□□□ -0.93
MDC1-201ENST00000376406 OR51G1Q8NGK1 321 aa9.26□□□□□ -0.93
MDC1-201ENST00000376406 MSGN1A6NI15 193 aa9.26□□□□□ -0.93
MDC1-201ENST00000376406 GCHFRP30047 84 aa9.26□□□□□ -0.93
MDC1-201ENST00000376406 SLC25A33Q9BSK2 321 aa9.26□□□□□ -0.93
MDC1-201ENST00000376406 USF3Q68DE3 2245 aa9.26□□□□□ -0.93
MDC1-201ENST00000376406 KIAA1549LQ6ZVL6 1849 aa9.26□□□□□ -0.93
MDC1-201ENST00000376406 NPIPB7O75200 414 aa9.26□□□□□ -0.93
MDC1-201ENST00000376406 NPPCP23582 126 aa9.26□□□□□ -0.93
MDC1-201ENST00000376406 ZNF738Q8NE65 137 aa9.26□□□□□ -0.93
MDC1-201ENST00000376406 IGKV3D-15A0A087WSY6 115 aa9.25□□□□□ -0.93
MDC1-201ENST00000376406 TMSB15BA0A087X1C1 80 aa9.25□□□□□ -0.93
MDC1-201ENST00000376406 C9orf106Q8NAJ2 232 aa9.25□□□□□ -0.93
MDC1-201ENST00000376406 NABP2Q9BQ15 211 aa9.25□□□□□ -0.93
MDC1-201ENST00000376406 AP5S1Q9NUS5 200 aa9.25□□□□□ -0.93
MDC1-201ENST00000376406 A0A087WWC5 75 aa9.25□□□□□ -0.93
MDC1-201ENST00000376406 DCAF16Q9NXF7 216 aa9.25□□□□□ -0.93
MDC1-201ENST00000376406 PRR32B1ATL7 298 aa9.25□□□□□ -0.93
MDC1-201ENST00000376406 KLF7O75840 302 aaPredicted RBP9.25□□□□□ -0.93
MDC1-201ENST00000376406 THBDP07204 575 aa9.25□□□□□ -0.93
MDC1-201ENST00000376406 DLX6P56179 175 aa9.25□□□□□ -0.93
MDC1-201ENST00000376406 RPL39P5Q59GN2 51 aa9.25□□□□□ -0.93
MDC1-201ENST00000376406 C12orf77C9JDV5 145 aa9.25□□□□□ -0.93
MDC1-201ENST00000376406 UBE2L6O14933 153 aa9.25□□□□□ -0.93
MDC1-201ENST00000376406 SCGB1D4Q6XE38 83 aa9.25□□□□□ -0.93
MDC1-201ENST00000376406 PNKDQ8N490 385 aa9.25□□□□□ -0.93
MDC1-201ENST00000376406 FAM131CQ96AQ9 280 aa9.25□□□□□ -0.93
MDC1-201ENST00000376406 PGLYRP4Q96LB8 373 aa9.25□□□□□ -0.93
MDC1-201ENST00000376406 K7ENP7 123 aa9.25□□□□□ -0.93
MDC1-201ENST00000376406 BIVMQ86UB2 503 aa9.25□□□□□ -0.93
MDC1-201ENST00000376406 CRYBB3P26998 211 aa9.25□□□□□ -0.93
MDC1-201ENST00000376406 NBL1P41271 181 aa9.25□□□□□ -0.93
MDC1-201ENST00000376406 COL5A1-AS1Q5SY13 56 aa9.25□□□□□ -0.93
MDC1-201ENST00000376406 CYP2G1PQ6ZSU1 146 aa9.25□□□□□ -0.93
MDC1-201ENST00000376406 RNF126Q9BV68 326 aa9.25□□□□□ -0.93
MDC1-201ENST00000376406 TMEM177Q53S58 311 aa9.24□□□□□ -0.93
MDC1-201ENST00000376406 COPS9Q8WXC6 57 aa9.24□□□□□ -0.93
MDC1-201ENST00000376406 RCC1LQ96I51 464 aaKnown RBP9.24□□□□□ -0.93
MDC1-201ENST00000376406 F8VVB4 439 aa9.24□□□□□ -0.93
MDC1-201ENST00000376406 F8VWA3 439 aa9.24□□□□□ -0.93
MDC1-201ENST00000376406 IL6RP08887 468 aaPredicted RBP9.24□□□□□ -0.93
MDC1-201ENST00000376406 FCGR2BP31994 310 aaPredicted RBP9.24□□□□□ -0.93
MDC1-201ENST00000376406 LY6DQ14210 128 aa9.24□□□□□ -0.93
MDC1-201ENST00000376406 SRSF7Q16629 238 aaKnown RBP eCLIP9.24□□□□□ -0.93
MDC1-201ENST00000376406 FAM89BQ8N5H3 189 aa9.24□□□□□ -0.93
MDC1-201ENST00000376406 CA2P00918 260 aa9.24□□□□□ -0.93
MDC1-201ENST00000376406 CLDND2Q8NHS1 167 aa9.24□□□□□ -0.93
MDC1-201ENST00000376406 ZNF837Q96EG3 531 aaPredicted RBP9.24□□□□□ -0.93
MDC1-201ENST00000376406 REG1AP05451 166 aa9.24□□□□□ -0.93
MDC1-201ENST00000376406 LINC00271P0C7V0 271 aa9.24□□□□□ -0.93
MDC1-201ENST00000376406 TRGC1P0CF51 173 aa9.24□□□□□ -0.93
MDC1-201ENST00000376406 CYB5R2Q6BCY4 276 aa9.24□□□□□ -0.93
MDC1-201ENST00000376406 ZNRF1Q8ND25 227 aa9.24□□□□□ -0.93
MDC1-201ENST00000376406 RTN4RQ9BZR6 473 aa9.24□□□□□ -0.93
MDC1-201ENST00000376406 NOTCH3Q9UM47 2321 aa9.24□□□□□ -0.93
MDC1-201ENST00000376406 IGKV3-7A0A075B6H7 116 aa9.24□□□□□ -0.93
MDC1-201ENST00000376406 PLAUP00749 431 aa9.24□□□□□ -0.93
MDC1-201ENST00000376406 ZNF25P17030 456 aaPredicted RBP9.24□□□□□ -0.93
MDC1-201ENST00000376406 FXYD3Q14802 87 aa9.24□□□□□ -0.93
MDC1-201ENST00000376406 DUX5Q96PT3 197 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms