RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 SERF2P84101 59 aa11.51□□□□□ -0.57
MSH5-202ENST00000375740 FAM78BQ5VT40 261 aa11.51□□□□□ -0.57
MSH5-202ENST00000375740 MIEN1Q9BRT3 115 aa11.51□□□□□ -0.57
MSH5-202ENST00000375740 QTRT1Q9BXR0 403 aaKnown RBP11.51□□□□□ -0.57
MSH5-202ENST00000375740 NBEAQ8NFP9 2946 aa11.51□□□□□ -0.57
MSH5-202ENST00000375740 CUL9Q8IWT3 2517 aa11.51□□□□□ -0.57
MSH5-202ENST00000375740 DEFA4P12838 97 aa11.51□□□□□ -0.57
MSH5-202ENST00000375740 RPL15P61313 204 aaKnown RBP11.51□□□□□ -0.57
MSH5-202ENST00000375740 ADIPOQQ15848 244 aa11.51□□□□□ -0.57
MSH5-202ENST00000375740 ZCCHC24Q8N2G6 241 aaKnown RBP11.51□□□□□ -0.57
MSH5-202ENST00000375740 C11orf42Q8N5U0 333 aa11.51□□□□□ -0.57
MSH5-202ENST00000375740 Q8TCH9 128 aa11.51□□□□□ -0.57
MSH5-202ENST00000375740 MANBALQ9NQG1 85 aa11.51□□□□□ -0.57
MSH5-202ENST00000375740 JKAMPQ9P055 326 aa11.51□□□□□ -0.57
MSH5-202ENST00000375740 ACACAQ13085 2346 aa11.5□□□□□ -0.57
MSH5-202ENST00000375740 KBTBD11-OT1A0A1B0GTJ5 212 aa11.5□□□□□ -0.57
MSH5-202ENST00000375740 K7ENP7 123 aa11.5□□□□□ -0.57
MSH5-202ENST00000375740 BSPH1Q075Z2 132 aa11.5□□□□□ -0.57
MSH5-202ENST00000375740 CT45A1Q5HYN5 189 aa11.5□□□□□ -0.57
MSH5-202ENST00000375740 TPTE2P1Q5T6R2 138 aa11.5□□□□□ -0.57
MSH5-202ENST00000375740 FAM216BQ8N7L0 139 aa11.5□□□□□ -0.57
MSH5-202ENST00000375740 CT45A3Q8NHU0 189 aa11.5□□□□□ -0.57
MSH5-202ENST00000375740 CIB3Q96Q77 187 aaPredicted RBP11.5□□□□□ -0.57
MSH5-202ENST00000375740 TP53TG3Q9ULZ0 132 aa11.5□□□□□ -0.57
MSH5-202ENST00000375740 TRAPPC1Q9Y5R8 145 aa11.5□□□□□ -0.57
MSH5-202ENST00000375740 APC2O95996 2303 aa11.5□□□□□ -0.57
MSH5-202ENST00000375740 SPTBN2O15020 2390 aa11.5□□□□□ -0.57
MSH5-202ENST00000375740 DSCAML1Q8TD84 2053 aa11.5□□□□□ -0.57
MSH5-202ENST00000375740 PLCE1Q9P212 2302 aa11.5□□□□□ -0.57
MSH5-202ENST00000375740 TRGV10A0A0A0MS01 117 aa11.5□□□□□ -0.57
MSH5-202ENST00000375740 A0A0U1RQK1 487 aa11.5□□□□□ -0.57
MSH5-202ENST00000375740 ZNF320A2RRD8 509 aa11.5□□□□□ -0.57
MSH5-202ENST00000375740 ATP6V1FQ16864 119 aa11.5□□□□□ -0.57
MSH5-202ENST00000375740 ZNF788Q6ZQV5 615 aa11.5□□□□□ -0.57
MSH5-202ENST00000375740 VKORC1L1Q8N0U8 176 aa11.5□□□□□ -0.57
MSH5-202ENST00000375740 OR10P1Q8NGE3 313 aa11.5□□□□□ -0.57
MSH5-202ENST00000375740 OR4F5Q8NH21 305 aa11.5□□□□□ -0.57
MSH5-202ENST00000375740 FAM216AQ8WUB2 273 aa11.5□□□□□ -0.57
MSH5-202ENST00000375740 OR4F4Q96R69 305 aa11.5□□□□□ -0.57
MSH5-202ENST00000375740 S1PR3Q99500 378 aa11.5□□□□□ -0.57
MSH5-202ENST00000375740 ATMQ13315 3056 aa11.49□□□□□ -0.57
MSH5-202ENST00000375740 RBX1P62877 108 aa11.49□□□□□ -0.57
MSH5-202ENST00000375740 TMEM41BQ5BJD5 291 aa11.49□□□□□ -0.57
MSH5-202ENST00000375740 Q6ZVH6 145 aa11.49□□□□□ -0.57
MSH5-202ENST00000375740 SLC25A22Q9H936 323 aa11.49□□□□□ -0.57
MSH5-202ENST00000375740 SLC39A9Q9NUM3 307 aa11.49□□□□□ -0.57
MSH5-202ENST00000375740 TMEM106BQ9NUM4 274 aa11.49□□□□□ -0.57
MSH5-202ENST00000375740 HCFC1P51610 2035 aa11.49□□□□□ -0.57
MSH5-202ENST00000375740 TYMSP04818 313 aa11.49□□□□□ -0.57
MSH5-202ENST00000375740 NPPCP23582 126 aa11.49□□□□□ -0.57
MSH5-202ENST00000375740 RAB7AP51149 207 aa11.49□□□□□ -0.57
MSH5-202ENST00000375740 LINC00310P59036 64 aa11.49□□□□□ -0.57
MSH5-202ENST00000375740 PRAMEF5Q5TYX0 476 aa11.49□□□□□ -0.57
MSH5-202ENST00000375740 VN1R17PQ8TDU5 208 aa11.49□□□□□ -0.57
MSH5-202ENST00000375740 TMEM147Q9BVK8 224 aa11.49□□□□□ -0.57
MSH5-202ENST00000375740 TANC2Q9HCD6 1990 aa11.48□□□□□ -0.57
MSH5-202ENST00000375740 C17orf100A8MU93 164 aa11.48□□□□□ -0.57
MSH5-202ENST00000375740 ITGB1BP1O14713 200 aa11.48□□□□□ -0.57
MSH5-202ENST00000375740 MMDQ15546 238 aa11.48□□□□□ -0.57
MSH5-202ENST00000375740 TEX36Q5VZQ5 186 aa11.48□□□□□ -0.57
MSH5-202ENST00000375740 C20orf144Q9BQM9 153 aa11.48□□□□□ -0.57
MSH5-202ENST00000375740 RAB9BQ9NP90 201 aa11.48□□□□□ -0.57
MSH5-202ENST00000375740 RNF114Q9Y508 228 aa11.48□□□□□ -0.57
MSH5-202ENST00000375740 DMXL2Q8TDJ6 3036 aa11.48□□□□□ -0.57
MSH5-202ENST00000375740 PGPEP1LA6NFU8 196 aa11.48□□□□□ -0.57
MSH5-202ENST00000375740 RBFOX2O43251 390 aaKnown RBP eCLIP11.48□□□□□ -0.572e-20■□□□□ 10.6
MSH5-202ENST00000375740 OR4A16Q8NH70 328 aa11.48□□□□□ -0.57
MSH5-202ENST00000375740 DDB2Q92466 427 aa11.48□□□□□ -0.57
MSH5-202ENST00000375740 PINX1Q96BK5 328 aaKnown RBP11.48□□□□□ -0.57
MSH5-202ENST00000375740 IMMP2LQ96T52 175 aa11.48□□□□□ -0.57
MSH5-202ENST00000375740 COL25A1Q9BXS0 654 aaPredicted RBP11.48□□□□□ -0.57
MSH5-202ENST00000375740 TIMM9Q9Y5J7 89 aa11.48□□□□□ -0.57
MSH5-202ENST00000375740 PXMP4Q9Y6I8 212 aa11.48□□□□□ -0.57
MSH5-202ENST00000375740 MAP1BP46821 2468 aaKnown RBP11.48□□□□□ -0.57
MSH5-202ENST00000375740 FAM87AP0C7U9 286 aa11.47□□□□□ -0.57
MSH5-202ENST00000375740 TNFRSF1AP19438 455 aa11.47□□□□□ -0.57
MSH5-202ENST00000375740 ADMP35318 185 aa11.47□□□□□ -0.57
MSH5-202ENST00000375740 TEX43Q6ZNM6 134 aa11.47□□□□□ -0.57
MSH5-202ENST00000375740 PIEZO2Q9H5I5 2752 aa11.47□□□□□ -0.57
MSH5-202ENST00000375740 SAA2-SAA4A0A096LPE2 208 aa11.47□□□□□ -0.57
MSH5-202ENST00000375740 TRAV3A0A0B4J244 114 aa11.47□□□□□ -0.57
MSH5-202ENST00000375740 CCL25O15444 150 aa11.47□□□□□ -0.57
MSH5-202ENST00000375740 MMP23AO75900 390 aa11.47□□□□□ -0.57
MSH5-202ENST00000375740 NDUFB8O95169 186 aa11.47□□□□□ -0.57
MSH5-202ENST00000375740 IFNA1P01562 189 aa11.47□□□□□ -0.57
MSH5-202ENST00000375740 SAA2P0DJI9 122 aaPredicted RBP11.47□□□□□ -0.57
MSH5-202ENST00000375740 CHRNB4P30926 498 aa11.47□□□□□ -0.57
MSH5-202ENST00000375740 ERVK-16P61578 105 aa11.47□□□□□ -0.57
MSH5-202ENST00000375740 AARDQ4LEZ3 155 aa11.47□□□□□ -0.57
MSH5-202ENST00000375740 ACSM6Q6P461 480 aa11.47□□□□□ -0.57
MSH5-202ENST00000375740 LYG1Q8N1E2 194 aa11.47□□□□□ -0.57
MSH5-202ENST00000375740 IDI2-AS1Q9NZ38 188 aa11.47□□□□□ -0.57
MSH5-202ENST00000375740 ZFP30Q9Y2G7 519 aa11.47□□□□□ -0.57
MSH5-202ENST00000375740 FAM90A9PA6NNJ1 464 aa11.46□□□□□ -0.57
MSH5-202ENST00000375740 C15orf62A8K5M9 175 aa11.46□□□□□ -0.57
MSH5-202ENST00000375740 F2Z2F3 143 aa11.46□□□□□ -0.57
MSH5-202ENST00000375740 TFF3Q07654 80 aa11.46□□□□□ -0.57
MSH5-202ENST00000375740 STPG4Q8N801 248 aa11.46□□□□□ -0.57
MSH5-202ENST00000375740 CMTM2Q8TAZ6 248 aa11.46□□□□□ -0.57
MSH5-202ENST00000375740 ANAPC16Q96DE5 110 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms