RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 SLC45A2Q9UMX9 530 aa17.43■□□□□ 0.38
UPF3A-202ENST00000375299 YLPM1P49750 1951 aaKnown RBP17.43■□□□□ 0.38
UPF3A-202ENST00000375299 SPINK4O60575 86 aa17.42■□□□□ 0.38
UPF3A-202ENST00000375299 FAM216AQ8WUB2 273 aa17.42■□□□□ 0.38
UPF3A-202ENST00000375299 SPRR3Q9UBC9 169 aa17.42■□□□□ 0.38
UPF3A-202ENST00000375299 ZFP30Q9Y2G7 519 aa17.42■□□□□ 0.38
UPF3A-202ENST00000375299 A0A1W2PS18 150 aa17.42■□□□□ 0.38
UPF3A-202ENST00000375299 C15orf61A6NNL5 157 aa17.42■□□□□ 0.38
UPF3A-202ENST00000375299 ZNF253O75346 499 aa17.42■□□□□ 0.38
UPF3A-202ENST00000375299 MMP23AO75900 390 aa17.42■□□□□ 0.38
UPF3A-202ENST00000375299 OR5G3P0C626 314 aa17.42■□□□□ 0.38
UPF3A-202ENST00000375299 IGFBP2P18065 325 aa17.42■□□□□ 0.38
UPF3A-202ENST00000375299 CRYBB3P26998 211 aa17.42■□□□□ 0.38
UPF3A-202ENST00000375299 INO80CQ6PI98 192 aaPredicted RBP17.42■□□□□ 0.38
UPF3A-202ENST00000375299 PQLC2Q6ZP29 291 aa17.42■□□□□ 0.38
UPF3A-202ENST00000375299 RCHY1Q96PM5 261 aa17.42■□□□□ 0.38
UPF3A-202ENST00000375299 OSTCQ9NRP0 149 aa17.42■□□□□ 0.38
UPF3A-202ENST00000375299 AHCTF1Q8WYP5 2266 aa17.41■□□□□ 0.38
UPF3A-202ENST00000375299 KLRC4-KLRK1H3BQV0 150 aa17.41■□□□□ 0.38
UPF3A-202ENST00000375299 PMCHP20382 165 aa17.41■□□□□ 0.38
UPF3A-202ENST00000375299 KIR2DS2P43631 304 aa17.41■□□□□ 0.38
UPF3A-202ENST00000375299 KIAA1644Q3SXP7 199 aa17.41■□□□□ 0.38
UPF3A-202ENST00000375299 DOLPP1Q86YN1 238 aa17.41■□□□□ 0.38
UPF3A-202ENST00000375299 RNASE7Q9H1E1 156 aaKnown RBP17.41■□□□□ 0.38
UPF3A-202ENST00000375299 TMEM167BQ9NRX6 74 aa17.41■□□□□ 0.38
UPF3A-202ENST00000375299 IL19Q9UHD0 177 aa17.41■□□□□ 0.38
UPF3A-202ENST00000375299 TIMM8AO60220 97 aaPredicted RBP17.4■□□□□ 0.38
UPF3A-202ENST00000375299 PSG5Q15238 335 aa17.4■□□□□ 0.38
UPF3A-202ENST00000375299 STARD4Q96DR4 205 aa17.4■□□□□ 0.38
UPF3A-202ENST00000375299 SLC35E1Q96K37 410 aa17.4■□□□□ 0.38
UPF3A-202ENST00000375299 IFI27L2Q9H2X8 130 aa17.4■□□□□ 0.38
UPF3A-202ENST00000375299 UQCR10Q9UDW1 63 aa17.4■□□□□ 0.38
UPF3A-202ENST00000375299 C21orf140B9A014 251 aa17.4■□□□□ 0.38
UPF3A-202ENST00000375299 ACTL6BO94805 426 aa17.4■□□□□ 0.38
UPF3A-202ENST00000375299 CHRNB4P30926 498 aa17.4■□□□□ 0.38
UPF3A-202ENST00000375299 DMRTA1Q5VZB9 504 aa17.4■□□□□ 0.38
UPF3A-202ENST00000375299 MDS2Q8NDY4 140 aa17.4■□□□□ 0.38
UPF3A-202ENST00000375299 ARRDC1-AS1Q9H2J1 176 aa17.4■□□□□ 0.38
UPF3A-202ENST00000375299 LINC00869P0C866 280 aa17.39■□□□□ 0.38
UPF3A-202ENST00000375299 PRDX2P32119 198 aa17.39■□□□□ 0.38
UPF3A-202ENST00000375299 ZNF83P51522 516 aa17.39■□□□□ 0.38
UPF3A-202ENST00000375299 FXYD3Q14802 87 aa17.39■□□□□ 0.38
UPF3A-202ENST00000375299 C11orf42Q8N5U0 333 aa17.39■□□□□ 0.38
UPF3A-202ENST00000375299 LRRC29Q8WV35 223 aa17.39■□□□□ 0.38
UPF3A-202ENST00000375299 CA2P00918 260 aa17.39■□□□□ 0.37
UPF3A-202ENST00000375299 AMY1AP04745 511 aa17.39■□□□□ 0.37
UPF3A-202ENST00000375299 MMDQ15546 238 aa17.39■□□□□ 0.37
UPF3A-202ENST00000375299 TIGITQ495A1 244 aa17.39■□□□□ 0.37
UPF3A-202ENST00000375299 OR4S2Q8NH73 311 aa17.39■□□□□ 0.37
UPF3A-202ENST00000375299 DDB2Q92466 427 aa17.39■□□□□ 0.37
UPF3A-202ENST00000375299 CORO2AQ92828 525 aa17.39■□□□□ 0.37
UPF3A-202ENST00000375299 NEUROG1Q92886 237 aa17.39■□□□□ 0.37
UPF3A-202ENST00000375299 FAM186AA6NE01 2351 aa17.38■□□□□ 0.37
UPF3A-202ENST00000375299 TRGV5A0A0B4J1U4 118 aa17.38■□□□□ 0.37
UPF3A-202ENST00000375299 LNP1A1A4G5 178 aa17.38■□□□□ 0.37
UPF3A-202ENST00000375299 SIAH2O43255 324 aa17.38■□□□□ 0.37
UPF3A-202ENST00000375299 ZNF324O75467 553 aaPredicted RBP17.38■□□□□ 0.37
UPF3A-202ENST00000375299 IGHV3-13P01766 116 aa17.38■□□□□ 0.37
UPF3A-202ENST00000375299 IGHV3-7P01780 117 aa17.38■□□□□ 0.37
UPF3A-202ENST00000375299 ZNF134P52741 427 aa17.38■□□□□ 0.37
UPF3A-202ENST00000375299 ENY2Q9NPA8 101 aa17.38■□□□□ 0.37
UPF3A-202ENST00000375299 FOXA2Q9Y261 457 aaPredicted RBP17.38■□□□□ 0.37
UPF3A-202ENST00000375299 BMPR1BO00238 502 aa17.38■□□□□ 0.37
UPF3A-202ENST00000375299 REG1AP05451 166 aa17.38■□□□□ 0.37
UPF3A-202ENST00000375299 IGLC2P0DOY2 106 aa17.38■□□□□ 0.37
UPF3A-202ENST00000375299 IGLC3P0DOY3 106 aa17.38■□□□□ 0.37
UPF3A-202ENST00000375299 SRIP30626 198 aa17.38■□□□□ 0.37
UPF3A-202ENST00000375299 TCL1AP56279 114 aa17.38■□□□□ 0.37
UPF3A-202ENST00000375299 HSPE1P61604 102 aaKnown RBP17.38■□□□□ 0.37
UPF3A-202ENST00000375299 SLC35B1P78383 322 aa17.38■□□□□ 0.37
UPF3A-202ENST00000375299 ARG2P78540 354 aa17.38■□□□□ 0.37
UPF3A-202ENST00000375299 FZR1Q9UM11 496 aa17.38■□□□□ 0.37
UPF3A-202ENST00000375299 FRYQ5TBA9 3013 aa17.37■□□□□ 0.37
UPF3A-202ENST00000375299 FNDC10F2Z333 226 aa17.37■□□□□ 0.37
UPF3A-202ENST00000375299 ISLRO14498 428 aa17.37■□□□□ 0.37
UPF3A-202ENST00000375299 HLA-DQA1P01909 254 aa17.37■□□□□ 0.37
UPF3A-202ENST00000375299 LOXL3P58215 753 aa17.37■□□□□ 0.37
UPF3A-202ENST00000375299 TMEM164Q5U3C3 297 aa17.37■□□□□ 0.37
UPF3A-202ENST00000375299 NABP2Q9BQ15 211 aa17.37■□□□□ 0.37
UPF3A-202ENST00000375299 HYPMO75409 117 aa17.37■□□□□ 0.37
UPF3A-202ENST00000375299 NIT1Q86X76 327 aa17.37■□□□□ 0.37
UPF3A-202ENST00000375299 DNAJC4Q9NNZ3 241 aa17.37■□□□□ 0.37
UPF3A-202ENST00000375299 TMEM14BQ9NUH8 114 aa17.37■□□□□ 0.37
UPF3A-202ENST00000375299 DUSP13Q9UII6 198 aa17.37■□□□□ 0.37
UPF3A-202ENST00000375299 AHRRA9YTQ3 701 aa17.36■□□□□ 0.37
UPF3A-202ENST00000375299 AGFG2O95081 481 aa17.36■□□□□ 0.37
UPF3A-202ENST00000375299 C3orf79P0CE67 100 aa17.36■□□□□ 0.37
UPF3A-202ENST00000375299 PRRX1P54821 245 aa17.36■□□□□ 0.37
UPF3A-202ENST00000375299 OR4A47Q6IF82 309 aa17.36■□□□□ 0.37
UPF3A-202ENST00000375299 TXN2Q99757 166 aa17.36■□□□□ 0.37
UPF3A-202ENST00000375299 TECRQ9NZ01 308 aaKnown RBP17.36■□□□□ 0.37
UPF3A-202ENST00000375299 MED13Q9UHV7 2174 aa17.36■□□□□ 0.37
UPF3A-202ENST00000375299 F2RL2O00254 374 aa17.36■□□□□ 0.37
UPF3A-202ENST00000375299 HNRNPA3P51991 378 aaKnown RBP17.36■□□□□ 0.37
UPF3A-202ENST00000375299 CR1LQ2VPA4 569 aa17.36■□□□□ 0.37
UPF3A-202ENST00000375299 IBA57Q5T440 356 aaKnown RBP17.36■□□□□ 0.37
UPF3A-202ENST00000375299 MRPL54Q6P161 138 aaKnown RBP17.36■□□□□ 0.37
UPF3A-202ENST00000375299 C1orf229Q6ZS94 237 aaPredicted RBP17.36■□□□□ 0.37
UPF3A-202ENST00000375299 ZNF503Q96F45 646 aa17.36■□□□□ 0.37
UPF3A-202ENST00000375299 CDC42EP3Q9UKI2 254 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms