RNA–Protein interactions for RNA: ENST00000374767.4

NIPSNAP3A-201, Transcript of nipsnap homolog 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP3A, Length 1,633 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3A-201ENST00000374767 PDLIM4P50479 330 aa11.21□□□□□ -0.61
NIPSNAP3A-201ENST00000374767 DLX1P56177 255 aa11.21□□□□□ -0.61
NIPSNAP3A-201ENST00000374767 ERHP84090 104 aaKnown RBP11.21□□□□□ -0.61
NIPSNAP3A-201ENST00000374767 TMEM249Q2WGJ8 235 aa11.21□□□□□ -0.61
NIPSNAP3A-201ENST00000374767 LDLRAD2Q5SZI1 272 aa11.21□□□□□ -0.61
NIPSNAP3A-201ENST00000374767 MMD2Q8IY49 270 aa11.21□□□□□ -0.61
NIPSNAP3A-201ENST00000374767 CACNG8Q8WXS5 425 aa11.21□□□□□ -0.61
NIPSNAP3A-201ENST00000374767 TMEM231Q9H6L2 316 aa11.21□□□□□ -0.61
NIPSNAP3A-201ENST00000374767 RBFOX3A6NFN3 312 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 CGB1A6NKQ9 187 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 NDUFS8O00217 210 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 NDUFS6O75380 124 aaKnown RBP11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 PRB1P04280 392 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 RNASE2P10153 161 aaKnown RBP11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 OPRK1P41145 380 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 SPTAN1Q13813 2472 aaKnown RBP11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 PSG5Q15238 335 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 PRSS8Q16651 343 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 ARSJQ5FYB0 599 aaPredicted RBP11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 MINOS1Q5TGZ0 78 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 PVRIGQ6DKI7 326 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 ACSM6Q6P461 480 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 MOB3BQ86TA1 216 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 CLDND2Q8NHS1 167 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 C1orf159Q96HA4 380 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 BPESC1Q9GZL8 116 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 EIF5A2Q9GZV4 153 aaKnown RBP11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 SIRPDQ9H106 197 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 SLC35B3Q9H1N7 401 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 SIGLEC9Q9Y336 463 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 MINOS1-NBL1R4GNA1 71 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 TNCP24821 2201 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 IGHV2-70DA0A0C4DH43 119 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 SLC25A17O43808 307 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 SCO1O75880 301 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 IGKV1D-33P01593 117 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 IGKV1-33P01594 117 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 GPX4P36969 197 aaPredicted RBP11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 KHDC3LQ587J8 217 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 ZNF506Q5JVG8 444 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 HINT2Q9BX68 163 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 SIRT7Q9NRC8 400 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 KCNIP2Q9NS61 270 aa11.2□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 COL12A1Q99715 3063 aa11.19□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 USP9XQ93008 2570 aaPredicted RBP11.19□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 IGHV3-72A0A0B4J1Y9 119 aa11.19□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 CTXND1A0A1B0GTU2 59 aa11.19□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 SEC14L6B5MCN3 397 aa11.19□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 E7EUB6 86 aa11.19□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 FOXH1O75593 365 aa11.19□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 HSPB1P04792 205 aaKnown RBP11.19□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 PAX1P15863 534 aa11.19□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 DEFA5Q01523 94 aa11.19□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 ACOT6Q3I5F7 207 aaPredicted RBP11.19□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 FFAR4Q5NUL3 377 aa11.19□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 TEPPQ6URK8 271 aa11.19□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 MRPL41Q8IXM3 137 aaKnown RBP11.19□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 OR10G4Q8NGN3 311 aa11.19□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 RNASEH2CQ8TDP1 164 aaKnown RBP11.19□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 CFHR4Q92496 578 aa11.19□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 CCL19Q99731 98 aa11.19□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 CYB5BO43169 146 aa11.18□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 SNAPINO95295 136 aa11.18□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 RPL29P47914 159 aaKnown RBP11.18□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 SUB1P53999 127 aaKnown RBP eCLIP11.18□□□□□ -0.622e-8■■■■■ 42.5
NIPSNAP3A-201ENST00000374767 RAB31Q13636 194 aa11.18□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 GUCA2BQ16661 112 aa11.18□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 CCDC144NLQ6NUI1 221 aa11.18□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 ATRAIDQ6UW56 229 aa11.18□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 VMO1Q7Z5L0 202 aa11.18□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 TMEM144Q7Z5S9 345 aa11.18□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 PPP1R27Q86WC6 154 aa11.18□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 ZNF114Q8NC26 417 aa11.18□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 OR10W1Q8NGF6 305 aa11.18□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 OR10G9Q8NGN4 311 aa11.18□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 OR10G7Q8NGN6 311 aa11.18□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 MGST2Q99735 147 aa11.18□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 SRSF8Q9BRL6 282 aaKnown RBP11.18□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 GGTLC1Q9BX51 225 aa11.18□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 ACTR3CQ9C0K3 210 aaPredicted RBP11.18□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 SLC39A9Q9NUM3 307 aa11.18□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 TET2Q6N021 2002 aaPredicted RBP11.18□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 MAP1LC3B2A6NCE7 125 aa11.17□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 TIMM23O14925 209 aa11.17□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 VENTXO95231 258 aa11.17□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 OPN1MWP04001 364 aa11.17□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 OPN1MW2P0DN77 364 aa11.17□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 OPN1MW3P0DN78 364 aa11.17□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 TAGLN2P37802 199 aaKnown RBP11.17□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 COMPP49747 757 aaPredicted RBP11.17□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 ELLP55199 621 aaPredicted RBP11.17□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 PRB3Q04118 309 aaPredicted RBP11.17□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 WT1-ASQ06250 92 aa11.17□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 CD69Q07108 199 aa11.17□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 ZNF787Q6DD87 383 aa11.17□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 SSX7Q7RTT5 188 aa11.17□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 NPBQ8NG41 125 aa11.17□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 RARRES2Q99969 163 aa11.17□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 NKX6-2Q9C056 277 aaPredicted RBP11.17□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 MAP1LC3BQ9GZQ8 125 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms