RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 IGHV2-70P01814 119 aa11.45□□□□□ -0.58
HMGCL-203ENST00000374490 SOD3P08294 240 aa11.45□□□□□ -0.58
HMGCL-203ENST00000374490 CD40P25942 277 aa11.45□□□□□ -0.58
HMGCL-203ENST00000374490 RPL29P47914 159 aaKnown RBP11.45□□□□□ -0.58
HMGCL-203ENST00000374490 RHOBP62745 196 aa11.45□□□□□ -0.58
HMGCL-203ENST00000374490 RTL8BQ17RB0 113 aa11.45□□□□□ -0.58
HMGCL-203ENST00000374490 PRR30Q53SZ7 412 aaPredicted RBP11.45□□□□□ -0.58
HMGCL-203ENST00000374490 SPRNQ5BIV9 151 aa11.45□□□□□ -0.58
HMGCL-203ENST00000374490 PYY3Q5JQD4 70 aa11.45□□□□□ -0.58
HMGCL-203ENST00000374490 COA6Q5JTJ3 125 aaKnown RBP11.45□□□□□ -0.58
HMGCL-203ENST00000374490 CST9LP1Q5W188 147 aa11.45□□□□□ -0.58
HMGCL-203ENST00000374490 OR4A47Q6IF82 309 aa11.45□□□□□ -0.58
HMGCL-203ENST00000374490 TEPPQ6URK8 271 aa11.45□□□□□ -0.58
HMGCL-203ENST00000374490 DOLPP1Q86YN1 238 aa11.45□□□□□ -0.58
HMGCL-203ENST00000374490 TMEM183AQ8IXX5 376 aa11.45□□□□□ -0.58
HMGCL-203ENST00000374490 LYG1Q8N1E2 194 aa11.45□□□□□ -0.58
HMGCL-203ENST00000374490 OR10D4PQ8NGN7 298 aa11.45□□□□□ -0.58
HMGCL-203ENST00000374490 FKBP11Q9NYL4 201 aa11.45□□□□□ -0.58
HMGCL-203ENST00000374490 ELOVL5Q9NYP7 299 aa11.45□□□□□ -0.58
HMGCL-203ENST00000374490 RPUSD1Q9UJJ7 312 aaKnown RBP11.45□□□□□ -0.58
HMGCL-203ENST00000374490 ARL2-SNX15V9GYD0 113 aa11.45□□□□□ -0.58
HMGCL-203ENST00000374490 CHD3Q12873 2000 aaKnown RBP11.45□□□□□ -0.58
HMGCL-203ENST00000374490 IL6RP08887 468 aaPredicted RBP11.44□□□□□ -0.58
HMGCL-203ENST00000374490 TNFRSF1AP19438 455 aa11.44□□□□□ -0.58
HMGCL-203ENST00000374490 GNB1P62873 340 aa11.44□□□□□ -0.58
HMGCL-203ENST00000374490 KIAA2026Q5HYC2 2103 aa11.44□□□□□ -0.58
HMGCL-203ENST00000374490 SLC25A48Q6ZT89 311 aaKnown RBP11.44□□□□□ -0.58
HMGCL-203ENST00000374490 LINC01551Q86U37 167 aa11.44□□□□□ -0.58
HMGCL-203ENST00000374490 VKORC1L1Q8N0U8 176 aa11.44□□□□□ -0.58
HMGCL-203ENST00000374490 ABHD12Q8N2K0 398 aa11.44□□□□□ -0.58
HMGCL-203ENST00000374490 ZNF383Q8NA42 475 aa11.44□□□□□ -0.58
HMGCL-203ENST00000374490 TMEM170AQ8WVE7 144 aa11.44□□□□□ -0.58
HMGCL-203ENST00000374490 GPR61Q9BZJ8 451 aa11.44□□□□□ -0.58
HMGCL-203ENST00000374490 SH3BGRL2Q9UJC5 107 aa11.44□□□□□ -0.58
HMGCL-203ENST00000374490 A8MXE2 369 aa11.43□□□□□ -0.58
HMGCL-203ENST00000374490 ARL14EPLP0DKL9 152 aa11.43□□□□□ -0.58
HMGCL-203ENST00000374490 BMP5P22003 454 aa11.43□□□□□ -0.58
HMGCL-203ENST00000374490 NPPCP23582 126 aa11.43□□□□□ -0.58
HMGCL-203ENST00000374490 MEF2CQ06413 473 aaPredicted RBP11.43□□□□□ -0.58
HMGCL-203ENST00000374490 MIC13Q5XKP0 118 aa11.43□□□□□ -0.58
HMGCL-203ENST00000374490 HIST2H2BCQ6DN03 193 aa11.43□□□□□ -0.58
HMGCL-203ENST00000374490 TMEM108Q6UXF1 575 aa11.43□□□□□ -0.58
HMGCL-203ENST00000374490 NECAP1Q8NC96 275 aa11.43□□□□□ -0.58
HMGCL-203ENST00000374490 GAL3ST2Q9H3Q3 398 aa11.43□□□□□ -0.58
HMGCL-203ENST00000374490 PLEKHA3Q9HB20 300 aa11.43□□□□□ -0.58
HMGCL-203ENST00000374490 ZNF835Q9Y2P0 537 aa11.43□□□□□ -0.58
HMGCL-203ENST00000374490 OR51B2Q9Y5P1 312 aa11.43□□□□□ -0.58
HMGCL-203ENST00000374490 LINC00312Q9Y6C7 94 aa11.43□□□□□ -0.58
HMGCL-203ENST00000374490 UPK2O00526 184 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 CA2P00918 260 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 SELLP14151 372 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 ATP5G3P48201 142 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 PRCDQ00LT1 54 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 GCSAMLQ5JQS6 135 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 TCF23Q7RTU1 214 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 OR1P1Q8NH06 330 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 NEUROG1Q92886 237 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 SLC35E1Q96K37 410 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 UHRF2Q96PU4 802 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 PCGF1Q9BSM1 259 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 PATZ1Q9HBE1 687 aaKnown RBP11.42□□□□□ -0.58
HMGCL-203ENST00000374490 SLC35D1Q9NTN3 355 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 SLC25A10Q9UBX3 287 aaPredicted RBP11.42□□□□□ -0.58
HMGCL-203ENST00000374490 MDFIC2A0A1B0GVS7 189 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 A0A1W2PPQ1 181 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 IGHV3-7P01780 117 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 GCHFRP30047 84 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 CASP6P55212 293 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 UBE2G2P60604 165 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 SSX2Q16385 188 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 ARSJQ5FYB0 599 aaPredicted RBP11.42□□□□□ -0.58
HMGCL-203ENST00000374490 ACTL10Q5JWF8 245 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 FAM201AQ5SY85 155 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 C1orf229Q6ZS94 237 aaPredicted RBP11.42□□□□□ -0.58
HMGCL-203ENST00000374490 ZGRF1Q86YA3 2104 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 STPG3Q8N7X2 389 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 LEAP2Q969E1 77 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 C11orf52Q96A22 123 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 CCL13Q99616 98 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 BET1LQ9NYM9 111 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 LY96Q9Y6Y9 160 aa11.42□□□□□ -0.58
HMGCL-203ENST00000374490 FLNCQ14315 2725 aa11.41□□□□□ -0.58
HMGCL-203ENST00000374490 TRAV9-1A0A075B6T8 112 aa11.41□□□□□ -0.58
HMGCL-203ENST00000374490 A0A0G2JNJ9 132 aa11.41□□□□□ -0.58
HMGCL-203ENST00000374490 A1L4Q6 167 aa11.41□□□□□ -0.58
HMGCL-203ENST00000374490 J3QR06 171 aa11.41□□□□□ -0.58
HMGCL-203ENST00000374490 NDUFB4O95168 129 aa11.41□□□□□ -0.58
HMGCL-203ENST00000374490 FABP4P15090 132 aa11.41□□□□□ -0.58
HMGCL-203ENST00000374490 PRR20EP86478 221 aa11.41□□□□□ -0.58
HMGCL-203ENST00000374490 PRR20CP86479 221 aa11.41□□□□□ -0.58
HMGCL-203ENST00000374490 PRR20DP86480 221 aa11.41□□□□□ -0.58
HMGCL-203ENST00000374490 PRR20BP86481 221 aa11.41□□□□□ -0.58
HMGCL-203ENST00000374490 PRR20AP86496 221 aa11.41□□□□□ -0.58
HMGCL-203ENST00000374490 GFI1BQ5VTD9 330 aa11.41□□□□□ -0.58
HMGCL-203ENST00000374490 OR5B3Q8NH48 314 aa11.41□□□□□ -0.58
HMGCL-203ENST00000374490 OSR1Q8TAX0 266 aaPredicted RBP11.41□□□□□ -0.58
HMGCL-203ENST00000374490 RNASEH2CQ8TDP1 164 aaKnown RBP11.41□□□□□ -0.58
HMGCL-203ENST00000374490 PACRGQ96M98 296 aaPredicted RBP11.41□□□□□ -0.58
HMGCL-203ENST00000374490 C19orf24Q9BVV8 132 aa11.41□□□□□ -0.58
HMGCL-203ENST00000374490 Q9UFV3 132 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms