RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 ATRXP46100 2492 aa10.11□□□□□ -0.79
PRPF4-202ENST00000374199 IGHV2-5P01817 119 aa10.11□□□□□ -0.79
PRPF4-202ENST00000374199 PRTN3P24158 256 aa10.11□□□□□ -0.79
PRPF4-202ENST00000374199 SFT2D1Q8WV19 159 aa10.11□□□□□ -0.79
PRPF4-202ENST00000374199 AJUBAQ96IF1 538 aa10.11□□□□□ -0.79
PRPF4-202ENST00000374199 NPVFQ9HCQ7 196 aa10.11□□□□□ -0.79
PRPF4-202ENST00000374199 KLF2Q9Y5W3 355 aaPredicted RBP10.11□□□□□ -0.79
PRPF4-202ENST00000374199 IGSF10Q6WRI0 2623 aa10.11□□□□□ -0.79
PRPF4-202ENST00000374199 CHD8Q9HCK8 2581 aa10.11□□□□□ -0.79
PRPF4-202ENST00000374199 CRYGCP07315 174 aa10.11□□□□□ -0.79
PRPF4-202ENST00000374199 HOXA1P49639 335 aaPredicted RBP10.11□□□□□ -0.79
PRPF4-202ENST00000374199 DEFA5Q01523 94 aa10.11□□□□□ -0.79
PRPF4-202ENST00000374199 AVPI1Q5T686 147 aa10.11□□□□□ -0.79
PRPF4-202ENST00000374199 CACNG8Q8WXS5 425 aa10.11□□□□□ -0.79
PRPF4-202ENST00000374199 NARS2Q96I59 477 aaKnown RBP10.11□□□□□ -0.79
PRPF4-202ENST00000374199 SRSF8Q9BRL6 282 aaKnown RBP10.11□□□□□ -0.79
PRPF4-202ENST00000374199 SSBP3Q9BWW4 388 aaPredicted RBP10.11□□□□□ -0.79
PRPF4-202ENST00000374199 HEYLQ9NQ87 328 aaPredicted RBP10.11□□□□□ -0.79
PRPF4-202ENST00000374199 HIVEP3Q5T1R4 2406 aa10.1□□□□□ -0.79
PRPF4-202ENST00000374199 NCOR2Q9Y618 2525 aa10.1□□□□□ -0.79
PRPF4-202ENST00000374199 PSMB11A5LHX3 300 aa10.1□□□□□ -0.79
PRPF4-202ENST00000374199 LINC00869P0C866 280 aa10.1□□□□□ -0.79
PRPF4-202ENST00000374199 RHEBQ15382 184 aa10.1□□□□□ -0.79
PRPF4-202ENST00000374199 NPBQ8NG41 125 aa10.1□□□□□ -0.79
PRPF4-202ENST00000374199 CLCC1Q96S66 551 aa10.1□□□□□ -0.79
PRPF4-202ENST00000374199 SIRPDQ9H106 197 aa10.1□□□□□ -0.79
PRPF4-202ENST00000374199 ZNF430Q9H8G1 570 aaPredicted RBP10.1□□□□□ -0.79
PRPF4-202ENST00000374199 PLEKHA3Q9HB20 300 aa10.1□□□□□ -0.79
PRPF4-202ENST00000374199 A0A1W2PN81 502 aa10.1□□□□□ -0.79
PRPF4-202ENST00000374199 CHRNA7P36544 502 aa10.1□□□□□ -0.79
PRPF4-202ENST00000374199 EBI3Q14213 229 aa10.1□□□□□ -0.79
PRPF4-202ENST00000374199 ZNF787Q6DD87 383 aa10.1□□□□□ -0.79
PRPF4-202ENST00000374199 SPOCK3Q9BQ16 436 aa10.1□□□□□ -0.79
PRPF4-202ENST00000374199 RP1L1Q8IWN7 2480 aaPredicted RBP10.1□□□□□ -0.79
PRPF4-202ENST00000374199 A0A087WWC5 75 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 IGLC7A0M8Q6 106 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 MAP1LC3B2A6NCE7 125 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 LY6HO94772 140 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 NDUFA3O95167 84 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 FOLR2P14207 255 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 WT1-ASQ06250 92 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 HAGHQ16775 308 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 KLK9Q2XQG4 91 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 TPTE2P1Q5T6R2 138 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 TMEM144Q7Z5S9 345 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 RNASEH2CQ8TDP1 164 aaKnown RBP10.09□□□□□ -0.79
PRPF4-202ENST00000374199 MAP1LC3BQ9GZQ8 125 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 KCNIP2Q9NS61 270 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 KLK9Q9UKQ9 250 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 SLC45A2Q9UMX9 530 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 IGKV1OR2-108A0A075B7D4 117 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 IFNA10P01566 189 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 FFAR4Q5NUL3 377 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 Q8N6K4 173 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 OR10G9Q8NGN4 311 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 OR10G7Q8NGN6 311 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 DOCK11Q5JSL3 2073 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 DIDO1Q9BTC0 2240 aaKnown RBP10.09□□□□□ -0.79
PRPF4-202ENST00000374199 hCG_1809904A0A1W2PP81 198 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 A0A1W2PPE2 198 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 A0A1W2PR64 198 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 A0A1W2PRV1 198 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 PPT1P50897 306 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 CD81P60033 236 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 PSG5Q15238 335 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 PRSS8Q16651 343 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 THAP8Q8NA92 274 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 EIF5A2Q9GZV4 153 aaKnown RBP10.09□□□□□ -0.79
PRPF4-202ENST00000374199 MANBALQ9NQG1 85 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 VAX2Q9UIW0 290 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 ARL2-SNX15V9GYD0 113 aa10.09□□□□□ -0.79
PRPF4-202ENST00000374199 VPS13CQ709C8 3753 aa10.08□□□□□ -0.8
PRPF4-202ENST00000374199 ICE1Q9Y2F5 2266 aa10.08□□□□□ -0.8
PRPF4-202ENST00000374199 OOSP1A8MZH6 123 aa10.08□□□□□ -0.8
PRPF4-202ENST00000374199 VWC2LB2RUY7 222 aa10.08□□□□□ -0.8
PRPF4-202ENST00000374199 RBMXL2O75526 392 aaKnown RBP10.08□□□□□ -0.8
PRPF4-202ENST00000374199 CD69Q07108 199 aa10.08□□□□□ -0.8
PRPF4-202ENST00000374199 ACOT6Q3I5F7 207 aaPredicted RBP10.08□□□□□ -0.8
PRPF4-202ENST00000374199 SLC35E3Q7Z769 313 aa10.08□□□□□ -0.8
PRPF4-202ENST00000374199 ACTR3CQ9C0K3 210 aaPredicted RBP10.08□□□□□ -0.8
PRPF4-202ENST00000374199 SIGLEC9Q9Y336 463 aa10.08□□□□□ -0.8
PRPF4-202ENST00000374199 UBR5O95071 2799 aaPredicted RBP10.08□□□□□ -0.8
PRPF4-202ENST00000374199 LOC105371242A0A075B767 164 aa10.08□□□□□ -0.8
PRPF4-202ENST00000374199 TEX22C9J3V5 150 aa10.08□□□□□ -0.8
PRPF4-202ENST00000374199 ZFP36P26651 326 aaKnown RBP10.08□□□□□ -0.8
PRPF4-202ENST00000374199 REG1BP48304 166 aa10.08□□□□□ -0.8
PRPF4-202ENST00000374199 COMPP49747 757 aaPredicted RBP10.08□□□□□ -0.8
PRPF4-202ENST00000374199 LMO4P61968 165 aa10.08□□□□□ -0.8
PRPF4-202ENST00000374199 SLC25A24Q6NUK1 477 aa10.08□□□□□ -0.8
PRPF4-202ENST00000374199 TEPPQ6URK8 271 aa10.08□□□□□ -0.8
PRPF4-202ENST00000374199 MAP1BP46821 2468 aaKnown RBP10.08□□□□□ -0.8
PRPF4-202ENST00000374199 COLCA2A8K830 154 aa10.07□□□□□ -0.8
PRPF4-202ENST00000374199 STAG3L2P0CL84 134 aa10.07□□□□□ -0.8
PRPF4-202ENST00000374199 STAG3L3P0CL85 134 aa10.07□□□□□ -0.8
PRPF4-202ENST00000374199 VMA21Q3ZAQ7 101 aa10.07□□□□□ -0.8
PRPF4-202ENST00000374199 RAB24Q969Q5 203 aa10.07□□□□□ -0.8
PRPF4-202ENST00000374199 SLC35E1Q96K37 410 aa10.07□□□□□ -0.8
PRPF4-202ENST00000374199 TPSG1Q9NRR2 321 aa10.07□□□□□ -0.8
PRPF4-202ENST00000374199 GAMTQ14353 236 aa10.07□□□□□ -0.8
PRPF4-202ENST00000374199 FAM122AQ96E09 287 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms