RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 LINC00312Q9Y6C7 94 aa9.74□□□□□ -0.85
VCL-202ENST00000372755 SCN1AP35498 2009 aa9.74□□□□□ -0.85
VCL-202ENST00000372755 MYH14Q7Z406 1995 aaKnown RBP9.74□□□□□ -0.85
VCL-202ENST00000372755 ERVH48-1M5A8F1 160 aa9.74□□□□□ -0.85
VCL-202ENST00000372755 ZNF883P0CG24 379 aa9.74□□□□□ -0.85
VCL-202ENST00000372755 EGR1P18146 543 aa9.74□□□□□ -0.85
VCL-202ENST00000372755 FAM27E3Q08E93 113 aa9.74□□□□□ -0.85
VCL-202ENST00000372755 CSRP2Q16527 193 aa9.74□□□□□ -0.85
VCL-202ENST00000372755 CHCHD2Q9Y6H1 151 aaPredicted RBP9.74□□□□□ -0.85
VCL-202ENST00000372755 QSER1Q2KHR3 1735 aa9.73□□□□□ -0.85
VCL-202ENST00000372755 A0A1B0GWB2 263 aa9.73□□□□□ -0.85
VCL-202ENST00000372755 UCP1P25874 307 aa9.73□□□□□ -0.85
VCL-202ENST00000372755 BSPH1Q075Z2 132 aa9.73□□□□□ -0.85
VCL-202ENST00000372755 TFF3Q07654 80 aa9.73□□□□□ -0.85
VCL-202ENST00000372755 RGPD4Q7Z3J3 1758 aa9.73□□□□□ -0.85
VCL-202ENST00000372755 KIAA0100Q14667 2235 aaKnown RBP9.73□□□□□ -0.85
VCL-202ENST00000372755 IGHV2OR16-5A0A0B4J2B6 119 aa9.73□□□□□ -0.85
VCL-202ENST00000372755 IZUMO1RA6ND01 250 aa9.73□□□□□ -0.85
VCL-202ENST00000372755 SLC25A20O43772 301 aa9.73□□□□□ -0.85
VCL-202ENST00000372755 CTAG1AP78358 180 aa9.73□□□□□ -0.85
VCL-202ENST00000372755 ORMDL3Q8N138 153 aa9.73□□□□□ -0.85
VCL-202ENST00000372755 OR13A1Q8NGR1 328 aa9.73□□□□□ -0.85
VCL-202ENST00000372755 OTORQ9NRC9 128 aa9.73□□□□□ -0.85
VCL-202ENST00000372755 C17orf98A8MV24 154 aa9.73□□□□□ -0.85
VCL-202ENST00000372755 CTSBP07858 339 aa9.73□□□□□ -0.85
VCL-202ENST00000372755 MALP21145 153 aa9.73□□□□□ -0.85
VCL-202ENST00000372755 FAM216BQ8N7L0 139 aa9.73□□□□□ -0.85
VCL-202ENST00000372755 TBL2Q9Y4P3 447 aaKnown RBP9.73□□□□□ -0.85
VCL-202ENST00000372755 C1QTNF5Q9BXJ0 243 aa9.73□□□□□ -0.85
VCL-202ENST00000372755 MRPL20Q9BYC9 149 aaKnown RBP9.73□□□□□ -0.85
VCL-202ENST00000372755 C7orf69Q9H7B7 122 aa9.73□□□□□ -0.85
VCL-202ENST00000372755 S4R3C0 116 aa9.73□□□□□ -0.85
VCL-202ENST00000372755 STRCQ7RTU9 1775 aa9.73□□□□□ -0.85
VCL-202ENST00000372755 OR10J3Q5JRS4 329 aa9.73□□□□□ -0.85
VCL-202ENST00000372755 GDF15Q99988 308 aa9.73□□□□□ -0.85
VCL-202ENST00000372755 SLC50A1Q9BRV3 221 aa9.73□□□□□ -0.85
VCL-202ENST00000372755 Q9H3A6 140 aa9.73□□□□□ -0.85
VCL-202ENST00000372755 SMCHD1A6NHR9 2005 aa9.72□□□□□ -0.85
VCL-202ENST00000372755 SCO2A0A1W2PP80 73 aa9.72□□□□□ -0.85
VCL-202ENST00000372755 SIGLEC12Q96PQ1 595 aa9.72□□□□□ -0.85
VCL-202ENST00000372755 RFPL3SP0C7P2 107 aa9.72□□□□□ -0.85
VCL-202ENST00000372755 EFNB1P98172 346 aa9.72□□□□□ -0.85
VCL-202ENST00000372755 LINC00518Q8N0U6 118 aa9.72□□□□□ -0.85
VCL-202ENST00000372755 JMJD8Q96S16 334 aa9.72□□□□□ -0.85
VCL-202ENST00000372755 SLC17A3O00476 420 aa9.72□□□□□ -0.85
VCL-202ENST00000372755 TIAF1O95411 115 aa9.72□□□□□ -0.85
VCL-202ENST00000372755 ASCL2Q99929 193 aa9.72□□□□□ -0.85
VCL-202ENST00000372755 WNT10AQ9GZT5 417 aa9.72□□□□□ -0.85
VCL-202ENST00000372755 A0A1B0GV72 72 aa9.72□□□□□ -0.85
VCL-202ENST00000372755 HTN3P15516 51 aa9.72□□□□□ -0.85
VCL-202ENST00000372755 KIR3DL3Q8N743 410 aa9.72□□□□□ -0.85
VCL-202ENST00000372755 NPFFR1Q9GZQ6 430 aa9.72□□□□□ -0.85
VCL-202ENST00000372755 DUSP14O95147 198 aaKnown RBP9.71□□□□□ -0.85
VCL-202ENST00000372755 CARHSP1Q9Y2V2 147 aaKnown RBP9.71□□□□□ -0.85
VCL-202ENST00000372755 IQCF6A8MYZ5 107 aa9.71□□□□□ -0.85
VCL-202ENST00000372755 VDAC2P45880 294 aaPredicted RBP9.71□□□□□ -0.86
VCL-202ENST00000372755 TMEM42Q69YG0 159 aa9.71□□□□□ -0.86
VCL-202ENST00000372755 STHQ8IWL8 128 aa9.71□□□□□ -0.86
VCL-202ENST00000372755 ST20Q9HBF5 79 aa9.71□□□□□ -0.86
VCL-202ENST00000372755 MARF1Q9Y4F3 1742 aaKnown RBP9.71□□□□□ -0.86
VCL-202ENST00000372755 NBR2O15453 112 aa9.71□□□□□ -0.86
VCL-202ENST00000372755 SRP19P09132 144 aaKnown RBP9.71□□□□□ -0.86
VCL-202ENST00000372755 PVRIGQ6DKI7 326 aa9.71□□□□□ -0.86
VCL-202ENST00000372755 YAE1D1Q9NRH1 226 aa9.71□□□□□ -0.86
VCL-202ENST00000372755 TRPM6Q9BX84 2022 aa9.71□□□□□ -0.86
VCL-202ENST00000372755 A0A1B0GV90 55 aa9.71□□□□□ -0.86
VCL-202ENST00000372755 PQLC2LA1A4F0 135 aa9.71□□□□□ -0.86
VCL-202ENST00000372755 TMEM50AO95807 157 aa9.71□□□□□ -0.86
VCL-202ENST00000372755 MRPS18CQ9Y3D5 142 aaKnown RBP9.71□□□□□ -0.86
VCL-202ENST00000372755 A0A087WWC5 75 aa9.7□□□□□ -0.86
VCL-202ENST00000372755 NDUFA3O95167 84 aa9.7□□□□□ -0.86
VCL-202ENST00000372755 CELA3AP09093 270 aa9.7□□□□□ -0.86
VCL-202ENST00000372755 IFI27P40305 119 aaPredicted RBP9.7□□□□□ -0.86
VCL-202ENST00000372755 ZNF324BQ6AW86 544 aaPredicted RBP9.7□□□□□ -0.86
VCL-202ENST00000372755 MIR17HGQ75NE6 70 aa9.7□□□□□ -0.86
VCL-202ENST00000372755 TMEM167AQ8TBQ9 72 aa9.7□□□□□ -0.86
VCL-202ENST00000372755 C11orf68Q9H3H3 251 aaKnown RBP9.7□□□□□ -0.86
VCL-202ENST00000372755 FAM71F2Q6NXP2 309 aa9.7□□□□□ -0.86
VCL-202ENST00000372755 C1QL2Q7Z5L3 287 aa9.7□□□□□ -0.86
VCL-202ENST00000372755 C17orf100A8MU93 164 aa9.7□□□□□ -0.86
VCL-202ENST00000372755 COLCA1Q6ZS62 124 aa9.7□□□□□ -0.86
VCL-202ENST00000372755 FABP5P3A8MUU1 101 aa9.7□□□□□ -0.86
VCL-202ENST00000372755 TGFAP01135 160 aa9.7□□□□□ -0.86
VCL-202ENST00000372755 Q5BKY6 102 aa9.7□□□□□ -0.86
VCL-202ENST00000372755 CYB5R2Q6BCY4 276 aa9.7□□□□□ -0.86
VCL-202ENST00000372755 OR5AN1Q8NGI8 311 aa9.7□□□□□ -0.86
VCL-202ENST00000372755 PRSS22Q9GZN4 317 aa9.7□□□□□ -0.86
VCL-202ENST00000372755 SPCS1Q9Y6A9 102 aa9.7□□□□□ -0.86
VCL-202ENST00000372755 EPOPA6NHQ4 379 aa9.69□□□□□ -0.86
VCL-202ENST00000372755 APOMO95445 188 aa9.69□□□□□ -0.86
VCL-202ENST00000372755 ATP5G3P48201 142 aa9.69□□□□□ -0.86
VCL-202ENST00000372755 OR5A1Q8NGJ0 315 aa9.69□□□□□ -0.86
VCL-202ENST00000372755 MSGN1A6NI15 193 aa9.69□□□□□ -0.86
VCL-202ENST00000372755 UPK2O00526 184 aa9.69□□□□□ -0.86
VCL-202ENST00000372755 FAM201AQ5SY85 155 aa9.69□□□□□ -0.86
VCL-202ENST00000372755 C14orf144Q96I85 54 aa9.69□□□□□ -0.86
VCL-202ENST00000372755 MUC21A0A0G2JKD1 596 aa9.69□□□□□ -0.86
VCL-202ENST00000372755 MUC21A0A140T8X8 626 aa9.69□□□□□ -0.86
VCL-202ENST00000372755 A0A1W2PRX2 142 aa9.69□□□□□ -0.86
VCL-202ENST00000372755 PROB1E7EW31 1015 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms