RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 SLC25A47Q6Q0C1 308 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 FA2HQ7L5A8 372 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 C1orf210Q8IVY1 113 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 OR5D14Q8NGL3 314 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 CT55Q8WUE5 264 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 ST6GALNAC6Q969X2 333 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 HES4Q9HCC6 221 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 SLC39A9Q9NUM3 307 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 IL36BQ9NZH7 164 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 C1RLQ9NZP8 487 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 ERG28Q9UKR5 140 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 TRAPPC2LQ9UL33 140 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 ZDBF2Q9HCK1 2354 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 CCL3P10147 92 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 PAX9P55771 341 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 UBE2G1P62253 170 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 ZNF90Q03938 601 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 MEF2CQ06413 473 aaPredicted RBP7.38□□□□□ -1.23
ATG4A-203ENST00000372232 AESQ08117 197 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 Q56UQ5 140 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 SPATA12Q7Z6I5 190 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 SUMF1Q8NBK3 374 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 OR10AG1Q8NH19 301 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 C18orf32Q8TCD1 76 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 ADAT3Q96EY9 351 aaPredicted RBP7.38□□□□□ -1.23
ATG4A-203ENST00000372232 OR10A2Q9H208 303 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 LIME1Q9H400 295 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 PROK2Q9HC23 129 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 KCNIP1Q9NZI2 227 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 LRP5LA4QPB2 252 aa7.37□□□□□ -1.23
ATG4A-203ENST00000372232 FAM181BA6NEQ2 426 aa7.37□□□□□ -1.23
ATG4A-203ENST00000372232 SLC22A20A6NK97 555 aa7.37□□□□□ -1.23
ATG4A-203ENST00000372232 SH2D7A6NKC9 451 aaPredicted RBP7.37□□□□□ -1.23
ATG4A-203ENST00000372232 SIVA1O15304 175 aa7.37□□□□□ -1.23
ATG4A-203ENST00000372232 PHF1O43189 567 aaPredicted RBP7.37□□□□□ -1.23
ATG4A-203ENST00000372232 SERPINE2P07093 398 aa7.37□□□□□ -1.23
ATG4A-203ENST00000372232 ADH4P08319 380 aa7.37□□□□□ -1.23
ATG4A-203ENST00000372232 LIFP15018 202 aa7.37□□□□□ -1.23
ATG4A-203ENST00000372232 SSTR5P35346 364 aa7.37□□□□□ -1.23
ATG4A-203ENST00000372232 IER3P46695 156 aa7.37□□□□□ -1.23
ATG4A-203ENST00000372232 GNG4P50150 75 aa7.37□□□□□ -1.23
ATG4A-203ENST00000372232 SSR4P51571 173 aa7.37□□□□□ -1.23
ATG4A-203ENST00000372232 RPL32P62910 135 aaKnown RBP7.37□□□□□ -1.23
ATG4A-203ENST00000372232 GAGE5Q13069 117 aa7.37□□□□□ -1.23
ATG4A-203ENST00000372232 GAGE6Q13070 117 aa7.37□□□□□ -1.23
ATG4A-203ENST00000372232 GABRA6Q16445 453 aa7.37□□□□□ -1.23
ATG4A-203ENST00000372232 CXorf66Q5JRM2 361 aaPredicted RBP7.37□□□□□ -1.23
ATG4A-203ENST00000372232 DCAF12Q5T6F0 453 aa7.37□□□□□ -1.23
ATG4A-203ENST00000372232 EBLN2Q6P2I7 272 aa7.37□□□□□ -1.23
ATG4A-203ENST00000372232 SLC23A3Q6PIS1 610 aa7.37□□□□□ -1.23
ATG4A-203ENST00000372232 BOD1L2Q8IYS8 172 aa7.37□□□□□ -1.23
ATG4A-203ENST00000372232 FAM19A2Q8N3H0 131 aa7.37□□□□□ -1.23
ATG4A-203ENST00000372232 VSTM2AQ8TAG5 236 aa7.37□□□□□ -1.23
ATG4A-203ENST00000372232 RAB1CQ92928 201 aa7.37□□□□□ -1.23
ATG4A-203ENST00000372232 TMEM45BQ96B21 275 aa7.37□□□□□ -1.23
ATG4A-203ENST00000372232 HARBI1Q96MB7 349 aa7.37□□□□□ -1.23
ATG4A-203ENST00000372232 SH2D2AQ9NP31 389 aa7.37□□□□□ -1.23
ATG4A-203ENST00000372232 SCRT2Q9NQ03 307 aa7.37□□□□□ -1.23
ATG4A-203ENST00000372232 IL36GQ9NZH8 169 aa7.37□□□□□ -1.23
ATG4A-203ENST00000372232 RER1O15258 196 aa7.36□□□□□ -1.23
ATG4A-203ENST00000372232 ZIC3O60481 467 aa7.36□□□□□ -1.23
ATG4A-203ENST00000372232 SLC25A6P12236 298 aa7.36□□□□□ -1.23
ATG4A-203ENST00000372232 GYPEP15421 78 aa7.36□□□□□ -1.23
ATG4A-203ENST00000372232 ZNF134P52741 427 aa7.36□□□□□ -1.23
ATG4A-203ENST00000372232 DSCR4P56555 118 aaPredicted RBP7.36□□□□□ -1.23
ATG4A-203ENST00000372232 RPS19BP1Q86WX3 136 aaKnown RBP7.36□□□□□ -1.23
ATG4A-203ENST00000372232 DOLPP1Q86YN1 238 aa7.36□□□□□ -1.23
ATG4A-203ENST00000372232 OR51E1Q8TCB6 317 aa7.36□□□□□ -1.23
ATG4A-203ENST00000372232 MED12Q93074 2177 aa7.36□□□□□ -1.23
ATG4A-203ENST00000372232 RNF183Q96D59 192 aa7.36□□□□□ -1.23
ATG4A-203ENST00000372232 YAE1D1Q9NRH1 226 aa7.36□□□□□ -1.23
ATG4A-203ENST00000372232 BEX4Q9NWD9 120 aaPredicted RBP7.36□□□□□ -1.23
ATG4A-203ENST00000372232 ANXA10Q9UJ72 324 aa7.36□□□□□ -1.23
ATG4A-203ENST00000372232 ZNF835Q9Y2P0 537 aa7.36□□□□□ -1.23
ATG4A-203ENST00000372232 TRAV38-1A0A0B4J264 116 aa7.36□□□□□ -1.23
ATG4A-203ENST00000372232 A4D1N5 150 aa7.36□□□□□ -1.23
ATG4A-203ENST00000372232 C2orf70A6NJV1 201 aa7.36□□□□□ -1.23
ATG4A-203ENST00000372232 H3BUT2 72 aa7.36□□□□□ -1.23
ATG4A-203ENST00000372232 HBZP02008 142 aa7.36□□□□□ -1.23
ATG4A-203ENST00000372232 GPR183P32249 361 aa7.36□□□□□ -1.23
ATG4A-203ENST00000372232 FOLR3P41439 243 aa7.36□□□□□ -1.23
ATG4A-203ENST00000372232 LRRC75BQ2VPJ9 315 aa7.36□□□□□ -1.23
ATG4A-203ENST00000372232 COX19Q49B96 90 aa7.36□□□□□ -1.23
ATG4A-203ENST00000372232 PHLDA2Q53GA4 152 aa7.36□□□□□ -1.23
ATG4A-203ENST00000372232 FAM57BQ71RH2 274 aa7.36□□□□□ -1.23
ATG4A-203ENST00000372232 RNF144BQ7Z419 303 aa7.36□□□□□ -1.23
ATG4A-203ENST00000372232 RPP25LQ8N5L8 163 aaKnown RBP7.36□□□□□ -1.23
ATG4A-203ENST00000372232 ZNF439Q8NDP4 499 aa7.36□□□□□ -1.23
ATG4A-203ENST00000372232 SPCS1Q9Y6A9 102 aa7.36□□□□□ -1.23
ATG4A-203ENST00000372232 A0A087X0K7 114 aa7.35□□□□□ -1.23
ATG4A-203ENST00000372232 A0A0G2JLM5 398 aa7.35□□□□□ -1.23
ATG4A-203ENST00000372232 CTXND1A0A1B0GTU2 59 aa7.35□□□□□ -1.23
ATG4A-203ENST00000372232 A0A1W2PP11 408 aa7.35□□□□□ -1.23
ATG4A-203ENST00000372232 A6NDN8 102 aa7.35□□□□□ -1.23
ATG4A-203ENST00000372232 CHST1O43916 411 aa7.35□□□□□ -1.23
ATG4A-203ENST00000372232 CNIH1O95406 144 aa7.35□□□□□ -1.23
ATG4A-203ENST00000372232 NTF3P20783 257 aa7.35□□□□□ -1.23
ATG4A-203ENST00000372232 ZNF121P58317 390 aaPredicted RBP7.35□□□□□ -1.23
ATG4A-203ENST00000372232 TGFBR3Q03167 851 aa7.35□□□□□ -1.23
ATG4A-203ENST00000372232 ZNF766Q5HY98 468 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms