RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 GUSBP1Q15486 140 aa9.94□□□□□ -0.82
PTPN1-201ENST00000371621 LILRA6Q6PI73 481 aa9.94□□□□□ -0.82
PTPN1-201ENST00000371621 ADAMTSL5Q6ZMM2 481 aa9.94□□□□□ -0.82
PTPN1-201ENST00000371621 VSTM2AQ8TAG5 236 aa9.94□□□□□ -0.82
PTPN1-201ENST00000371621 SCRT1Q9BWW7 348 aa9.94□□□□□ -0.82
PTPN1-201ENST00000371621 FBLN5Q9UBX5 448 aa9.94□□□□□ -0.82
PTPN1-201ENST00000371621 TSC2P49815 1807 aa9.94□□□□□ -0.82
PTPN1-201ENST00000371621 TNFSF14O43557 240 aa9.94□□□□□ -0.82
PTPN1-201ENST00000371621 RPL7P18124 248 aaKnown RBP9.94□□□□□ -0.82
PTPN1-201ENST00000371621 IGHV2-26A0A0B4J1V2 119 aa9.94□□□□□ -0.82
PTPN1-201ENST00000371621 C22orf46C9J442 243 aa9.94□□□□□ -0.82
PTPN1-201ENST00000371621 APOHP02749 345 aaPredicted RBP9.94□□□□□ -0.82
PTPN1-201ENST00000371621 NMSQ5H8A3 153 aa9.94□□□□□ -0.82
PTPN1-201ENST00000371621 OR10J3Q5JRS4 329 aa9.94□□□□□ -0.82
PTPN1-201ENST00000371621 FAM71F2Q6NXP2 309 aa9.94□□□□□ -0.82
PTPN1-201ENST00000371621 AGBL5Q8NDL9 886 aa9.94□□□□□ -0.82
PTPN1-201ENST00000371621 OR1L1Q8NH94 360 aa9.94□□□□□ -0.82
PTPN1-201ENST00000371621 PATJQ8NI35 1801 aa9.94□□□□□ -0.82
PTPN1-201ENST00000371621 TNRC6AQ8NDV7 1962 aaKnown RBP9.94□□□□□ -0.82
PTPN1-201ENST00000371621 CNOT1A5YKK6 2376 aaKnown RBP9.93□□□□□ -0.82
PTPN1-201ENST00000371621 IGHV3-21A0A0B4J1V1 117 aa9.93□□□□□ -0.82
PTPN1-201ENST00000371621 A0A1B0GW15 77 aa9.93□□□□□ -0.82
PTPN1-201ENST00000371621 IGLC7A0M8Q6 106 aa9.93□□□□□ -0.82
PTPN1-201ENST00000371621 LRRC30A6NM36 301 aa9.93□□□□□ -0.82
PTPN1-201ENST00000371621 WISP1O95388 367 aa9.93□□□□□ -0.82
PTPN1-201ENST00000371621 TMEM144Q7Z5S9 345 aa9.93□□□□□ -0.82
PTPN1-201ENST00000371621 SCCPDHQ8NBX0 429 aa9.93□□□□□ -0.82
PTPN1-201ENST00000371621 TXNDC17Q9BRA2 123 aa9.93□□□□□ -0.82
PTPN1-201ENST00000371621 RPP25Q9BUL9 199 aaKnown RBP9.93□□□□□ -0.82
PTPN1-201ENST00000371621 POLDIP2Q9Y2S7 368 aa9.93□□□□□ -0.82
PTPN1-201ENST00000371621 CFIP05156 583 aa9.93□□□□□ -0.82
PTPN1-201ENST00000371621 SPINK8P0C7L1 97 aa9.93□□□□□ -0.82
PTPN1-201ENST00000371621 ZP4Q12836 540 aa9.93□□□□□ -0.82
PTPN1-201ENST00000371621 PDPNQ86YL7 162 aa9.93□□□□□ -0.82
PTPN1-201ENST00000371621 ZNF837Q96EG3 531 aaPredicted RBP9.93□□□□□ -0.82
PTPN1-201ENST00000371621 ZNF48Q96MX3 618 aaPredicted RBP9.93□□□□□ -0.82
PTPN1-201ENST00000371621 RTL8AQ9BWD3 113 aa9.93□□□□□ -0.82
PTPN1-201ENST00000371621 TMEM265A0A087WTH1 108 aa9.93□□□□□ -0.82
PTPN1-201ENST00000371621 TIMM8AO60220 97 aaPredicted RBP9.93□□□□□ -0.82
PTPN1-201ENST00000371621 CLDN14O95500 239 aa9.93□□□□□ -0.82
PTPN1-201ENST00000371621 PSG4Q00888 419 aa9.93□□□□□ -0.82
PTPN1-201ENST00000371621 RBPJQ06330 500 aa9.93□□□□□ -0.82
PTPN1-201ENST00000371621 BVES-AS1Q5T3Y7 98 aa9.93□□□□□ -0.82
PTPN1-201ENST00000371621 ZNF296Q8WUU4 475 aaPredicted RBP9.93□□□□□ -0.82
PTPN1-201ENST00000371621 LSM10Q969L4 123 aaKnown RBP9.93□□□□□ -0.82
PTPN1-201ENST00000371621 LYZL4Q96KX0 146 aa9.93□□□□□ -0.82
PTPN1-201ENST00000371621 CRYBA4P53673 196 aa9.92□□□□□ -0.82
PTPN1-201ENST00000371621 MIR17HGQ75NE6 70 aa9.92□□□□□ -0.82
PTPN1-201ENST00000371621 AGMATQ9BSE5 352 aa9.92□□□□□ -0.82
PTPN1-201ENST00000371621 TWSG1Q9GZX9 223 aa9.92□□□□□ -0.82
PTPN1-201ENST00000371621 HES4Q9HCC6 221 aa9.92□□□□□ -0.82
PTPN1-201ENST00000371621 IGKV1-12A0A0C4DH73 117 aa9.92□□□□□ -0.82
PTPN1-201ENST00000371621 TEX48A0A1B0GUV7 120 aa9.92□□□□□ -0.82
PTPN1-201ENST00000371621 TMEM30CPA0ZSE6 113 aa9.92□□□□□ -0.82
PTPN1-201ENST00000371621 RAMP3O60896 148 aa9.92□□□□□ -0.82
PTPN1-201ENST00000371621 IGKV1D-12P01611 117 aa9.92□□□□□ -0.82
PTPN1-201ENST00000371621 PPBPP02775 128 aa9.92□□□□□ -0.82
PTPN1-201ENST00000371621 FTH1P19P0C7X4 201 aa9.92□□□□□ -0.82
PTPN1-201ENST00000371621 SEC11AP67812 179 aa9.92□□□□□ -0.82
PTPN1-201ENST00000371621 PGPA6NDG6 321 aa9.92□□□□□ -0.82
PTPN1-201ENST00000371621 PDLIM4P50479 330 aa9.92□□□□□ -0.82
PTPN1-201ENST00000371621 C3AR1Q16581 482 aa9.92□□□□□ -0.82
PTPN1-201ENST00000371621 PRSS57Q6UWY2 283 aa9.92□□□□□ -0.82
PTPN1-201ENST00000371621 OR5A1Q8NGJ0 315 aa9.92□□□□□ -0.82
PTPN1-201ENST00000371621 YPEL4Q96NS1 127 aa9.92□□□□□ -0.82
PTPN1-201ENST00000371621 MS4A5Q9H3V2 200 aa9.92□□□□□ -0.82
PTPN1-201ENST00000371621 USP34Q70CQ2 3546 aa9.92□□□□□ -0.82
PTPN1-201ENST00000371621 GAGE12HA6NDE8 117 aa9.91□□□□□ -0.82
PTPN1-201ENST00000371621 SSR4P51571 173 aa9.91□□□□□ -0.82
PTPN1-201ENST00000371621 PAX9P55771 341 aa9.91□□□□□ -0.82
PTPN1-201ENST00000371621 CLDN18P56856 261 aa9.91□□□□□ -0.82
PTPN1-201ENST00000371621 SPATA31B1PQ5VZV4 182 aa9.91□□□□□ -0.82
PTPN1-201ENST00000371621 MBNL3Q9NUK0 354 aaKnown RBP9.91□□□□□ -0.82
PTPN1-201ENST00000371621 FREM1Q5H8C1 2179 aa9.91□□□□□ -0.82
PTPN1-201ENST00000371621 APOMO95445 188 aa9.91□□□□□ -0.82
PTPN1-201ENST00000371621 SUMO3P55854 103 aaPredicted RBP9.91□□□□□ -0.82
PTPN1-201ENST00000371621 ERHP84090 104 aaKnown RBP9.91□□□□□ -0.82
PTPN1-201ENST00000371621 DCAF12Q5T6F0 453 aa9.91□□□□□ -0.82
PTPN1-201ENST00000371621 PRNTQ86SH4 94 aa9.91□□□□□ -0.82
PTPN1-201ENST00000371621 ZNF524Q96C55 264 aa9.91□□□□□ -0.82
PTPN1-201ENST00000371621 POM121L2Q96KW2 1035 aa9.91□□□□□ -0.82
PTPN1-201ENST00000371621 PYGO2Q9BRQ0 406 aa9.91□□□□□ -0.82
PTPN1-201ENST00000371621 SYS1-DBNDD2H3BUS1 97 aa9.91□□□□□ -0.82
PTPN1-201ENST00000371621 SP1P08047 785 aa9.91□□□□□ -0.82
PTPN1-201ENST00000371621 RPL15P61313 204 aaKnown RBP9.91□□□□□ -0.82
PTPN1-201ENST00000371621 HBBP68871 147 aa9.91□□□□□ -0.82
PTPN1-201ENST00000371621 SLC25A47Q6Q0C1 308 aa9.91□□□□□ -0.82
PTPN1-201ENST00000371621 NABP2Q9BQ15 211 aa9.91□□□□□ -0.82
PTPN1-201ENST00000371621 TIMM9Q9Y5J7 89 aa9.91□□□□□ -0.82
PTPN1-201ENST00000371621 HELZP42694 1942 aaKnown RBP9.91□□□□□ -0.82
PTPN1-201ENST00000371621 FGF12P61328 243 aa9.91□□□□□ -0.82
PTPN1-201ENST00000371621 CACNG7P62955 275 aa9.91□□□□□ -0.82
PTPN1-201ENST00000371621 TBR1Q16650 682 aa9.91□□□□□ -0.82
PTPN1-201ENST00000371621 ALKBH6Q3KRA9 238 aa9.91□□□□□ -0.82
PTPN1-201ENST00000371621 LINC00479Q96M42 142 aa9.91□□□□□ -0.82
PTPN1-201ENST00000371621 C1orf147Q96MC9 270 aaPredicted RBP9.91□□□□□ -0.82
PTPN1-201ENST00000371621 UBTD1Q9HAC8 227 aa9.91□□□□□ -0.82
PTPN1-201ENST00000371621 A0A1W2PQD3 144 aa9.9□□□□□ -0.82
PTPN1-201ENST00000371621 B5MCH6 92 aa9.9□□□□□ -0.82
PTPN1-201ENST00000371621 CD40P25942 277 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms