RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 SAPCD1Q5SSQ6 148 aa8.69□□□□□ -1.02
PRPF38B-201ENST00000370021 OR2Z1Q8NG97 314 aa8.69□□□□□ -1.02
PRPF38B-201ENST00000370021 OR13A1Q8NGR1 328 aa8.69□□□□□ -1.02
PRPF38B-201ENST00000370021 IL19Q9UHD0 177 aa8.69□□□□□ -1.02
PRPF38B-201ENST00000370021 TIMM9Q9Y5J7 89 aa8.69□□□□□ -1.02
PRPF38B-201ENST00000370021 DYSFO75923 2080 aa8.69□□□□□ -1.02
PRPF38B-201ENST00000370021 ETV2O00321 342 aaPredicted RBP8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 CA2P00918 260 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 PDLIM4P50479 330 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 GMPPAQ96IJ6 420 aaPredicted RBP8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 FAM90A10PA6NDY2 464 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 FAM90A18PA6NE21 464 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 FAM90A16PA6NEW6 464 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 FAM90A20PA6NIJ5 464 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 FAM90A8PA6NJQ4 464 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 FAM90A7PA6NKC0 464 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 FAM90A22PA8MWA6 464 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 FAM90A12PA8MX19 464 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 FAM90A5PA8MXJ8 464 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 FAM90A23PA8MXZ1 464 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 FAM90A15PP0C7V4 464 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 FAM90A13PP0C7W8 464 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 FAM90A14PP0C7W9 464 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 FAM90A24PP0C7X0 464 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 COX6A1P12074 109 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 REG1BP48304 166 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 UBE2V1Q13404 147 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 TM4SF20Q53R12 229 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 MOB1BQ7L9L4 216 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 KCNS1Q96KK3 526 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 TWSG1Q9GZX9 223 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 WDR54Q9H977 334 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 METRNQ9UJH8 293 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 LOXL2Q9Y4K0 774 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 TRAV5A0A0B4J249 113 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 SERTM2A0A1B0GWG4 89 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 K7EN84 100 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 WNT2P09544 360 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 EFNB3Q15768 340 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 FAM201AQ5SY85 155 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 TMEM116Q8NCL8 245 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 SPSB4Q96A44 273 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 RIF1Q5UIP0 2472 aaKnown RBP8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 TANC2Q9HCD6 1990 aa8.68□□□□□ -1.02
PRPF38B-201ENST00000370021 OR2T8A6NH00 312 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 OR4C46A6NHA9 309 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 TYMSP04818 313 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 CD46P15529 392 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 Q5PR19 223 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 TEX43Q6ZNM6 134 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 LRRC29Q8WV35 223 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 MGST2Q99735 147 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 FAM173AQ9BQD7 235 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 DUSP23Q9BVJ7 150 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 TCF19Q9Y242 345 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 WDR83OSQ9Y284 106 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 COL6A3P12111 3177 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 OOEPA6NGQ2 149 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 C15orf62A8K5M9 175 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 FAM90A26D6RGX4 464 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 PPIAL4DF5H284 164 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 TDGF1P13385 188 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 PSG7Q13046 419 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 ARL6IP6Q8N6S5 226 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 ZNRF1Q8ND25 227 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 TMEM131Q92545 1883 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 FLYWCH2Q96CP2 140 aaKnown RBP8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 PGLYRP4Q96LB8 373 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 NABP2Q9BQ15 211 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 GGTLC1Q9BX51 225 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 TMEM140Q9NV12 185 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 TP53TG3Q9ULZ0 132 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 LSM4Q9Y4Z0 139 aaKnown RBP8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 ENSAO43768 121 aaKnown RBP8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 SLC25A5P05141 298 aaKnown RBP8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 TCF24Q7RTU0 167 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 GGNQ86UU5 652 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 CDC42EP3Q9UKI2 254 aa8.67□□□□□ -1.02
PRPF38B-201ENST00000370021 ABCA4P78363 2273 aa8.66□□□□□ -1.02
PRPF38B-201ENST00000370021 A0A087X0K7 114 aa8.66□□□□□ -1.02
PRPF38B-201ENST00000370021 MUC21A0A0G2JKD1 596 aa8.66□□□□□ -1.02
PRPF38B-201ENST00000370021 MUC21A0A140T8X8 626 aa8.66□□□□□ -1.02
PRPF38B-201ENST00000370021 LOC389332A0A1B0GUA5 103 aa8.66□□□□□ -1.02
PRPF38B-201ENST00000370021 COX7A2P2O60397 106 aa8.66□□□□□ -1.02
PRPF38B-201ENST00000370021 COMPP49747 757 aaPredicted RBP8.66□□□□□ -1.02
PRPF38B-201ENST00000370021 OR1C1Q15619 314 aa8.66□□□□□ -1.02
PRPF38B-201ENST00000370021 MUC21Q5SSG8 566 aa8.66□□□□□ -1.02
PRPF38B-201ENST00000370021 DNASE2BQ8WZ79 361 aa8.66□□□□□ -1.02
PRPF38B-201ENST00000370021 ZNF891A8MT65 544 aaPredicted RBP8.66□□□□□ -1.02
PRPF38B-201ENST00000370021 PRRX1P54821 245 aa8.66□□□□□ -1.02
PRPF38B-201ENST00000370021 TMEM251Q8N6I4 163 aa8.66□□□□□ -1.02
PRPF38B-201ENST00000370021 TSKUQ8WUA8 353 aa8.66□□□□□ -1.02
PRPF38B-201ENST00000370021 FAM168AQ92567 244 aa8.66□□□□□ -1.02
PRPF38B-201ENST00000370021 FNDC4Q9H6D8 234 aaPredicted RBP8.66□□□□□ -1.02
PRPF38B-201ENST00000370021 SH3BGRL2Q9UJC5 107 aa8.66□□□□□ -1.02
PRPF38B-201ENST00000370021 HILPDAQ9Y5L2 63 aa8.66□□□□□ -1.02
PRPF38B-201ENST00000370021 COX11Q9Y6N1 276 aa8.66□□□□□ -1.02
PRPF38B-201ENST00000370021 SPRY3O43610 288 aa8.66□□□□□ -1.02
PRPF38B-201ENST00000370021 AMY1AP04745 511 aa8.66□□□□□ -1.02
PRPF38B-201ENST00000370021 PYYP10082 97 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms