RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 ROS1P08922 2347 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 DIRC3C9JPN6 131 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 ZNF253O75346 499 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 BRI3O95415 125 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 FCGR2AP12318 317 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 AZU1P20160 251 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 NPBWR2P48146 333 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 PSG9Q00887 426 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 OR5P3Q8WZ94 311 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 PIGTQ969N2 578 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 PSMG3Q9BT73 122 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-204ENST00000369530 PARLQ9H300 379 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 SLC7A10Q9NS82 523 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 JPT1Q9UK76 154 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 E7EQL1 145 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 SLC33A1O00400 549 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-204ENST00000369530 ZNF205O95201 554 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 PLAUP00749 431 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 ZNF93P35789 620 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-204ENST00000369530 UNC119Q13432 240 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 GVQW1Q8N7I0 195 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 ZNF709Q8N972 641 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 OR10G8Q8NGN5 311 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 SPTSSAQ969W0 71 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 C10orf35Q96D05 121 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 SFRP2Q96HF1 295 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 OBP2BQ9NPH6 170 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 STARD9Q9P2P6 4700 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 HECTD4Q9Y4D8 3996 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 RYR3Q15413 4870 aa5.68□□□□□ -1.5
CSDE1-204ENST00000369530 M0R135 149 aa5.67□□□□□ -1.5
CSDE1-204ENST00000369530 SNU13P55769 128 aaKnown RBP5.67□□□□□ -1.5
CSDE1-204ENST00000369530 S100A7AQ86SG5 101 aa5.67□□□□□ -1.5
CSDE1-204ENST00000369530 OR1N2Q8NGR9 330 aa5.67□□□□□ -1.5
CSDE1-204ENST00000369530 OR2AE1Q8NHA4 323 aa5.67□□□□□ -1.5
CSDE1-204ENST00000369530 RNF133Q8WVZ7 376 aa5.67□□□□□ -1.5
CSDE1-204ENST00000369530 ZNF799Q96GE5 643 aa5.67□□□□□ -1.5
CSDE1-204ENST00000369530 SMIM3Q9BZL3 60 aa5.67□□□□□ -1.5
CSDE1-204ENST00000369530 ZNF442Q9H7R0 627 aa5.67□□□□□ -1.5
CSDE1-204ENST00000369530 RCL1Q9Y2P8 373 aaKnown RBP5.67□□□□□ -1.5
CSDE1-204ENST00000369530 TRAPPC1Q9Y5R8 145 aa5.67□□□□□ -1.5
CSDE1-204ENST00000369530 LHFPL6Q9Y693 200 aa5.67□□□□□ -1.5
CSDE1-204ENST00000369530 PCNX1Q96RV3 2341 aa5.67□□□□□ -1.5
CSDE1-204ENST00000369530 ESPL1Q14674 2120 aa5.67□□□□□ -1.5
CSDE1-204ENST00000369530 TRAV9-2A0A087WT02 112 aa5.67□□□□□ -1.5
CSDE1-204ENST00000369530 ADMP35318 185 aa5.67□□□□□ -1.5
CSDE1-204ENST00000369530 HINT1P49773 126 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-204ENST00000369530 TMEM187Q14656 261 aa5.67□□□□□ -1.5
CSDE1-204ENST00000369530 HLA-DRB5Q30154 266 aa5.67□□□□□ -1.5
CSDE1-204ENST00000369530 MAP1AP78559 2803 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-204ENST00000369530 TTRP02766 147 aa5.67□□□□□ -1.5
CSDE1-204ENST00000369530 TAS2R46P59540 309 aa5.67□□□□□ -1.5
CSDE1-204ENST00000369530 CKS1BP61024 79 aa5.67□□□□□ -1.5
CSDE1-204ENST00000369530 TSPO2Q5TGU0 170 aa5.67□□□□□ -1.5
CSDE1-204ENST00000369530 AMMECR1LQ6DCA0 310 aa5.67□□□□□ -1.5
CSDE1-204ENST00000369530 CSNK2A3Q8NEV1 391 aa5.67□□□□□ -1.5
CSDE1-204ENST00000369530 OR8B12Q8NGG6 310 aa5.67□□□□□ -1.5
CSDE1-204ENST00000369530 ADAT3Q96EY9 351 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-204ENST00000369530 COL7A1Q02388 2944 aa5.67□□□□□ -1.5
CSDE1-204ENST00000369530 A0A1W2PR80 420 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 SERF1AO75920 110 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 MT-CO2P00403 227 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 TUBG1P23258 451 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 MDH2P40926 338 aaKnown RBP5.66□□□□□ -1.5
CSDE1-204ENST00000369530 TMEM249Q2WGJ8 235 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 DEFB113Q30KQ7 82 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 CCDC144NLQ6NUI1 221 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 GLIPR1L1Q6UWM5 242 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 CIARTQ8N365 385 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-204ENST00000369530 ZNF596Q8TC21 504 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 AJUBAQ96IF1 538 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 ST20Q9HBF5 79 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 TUBG2Q9NRH3 451 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 EHFQ9NZC4 300 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 PIGLQ9Y2B2 252 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 K7EP34 96 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 ZNF32P17041 273 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 MBNL2Q5VZF2 373 aaKnown RBP5.66□□□□□ -1.5
CSDE1-204ENST00000369530 Q6ZS49 121 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 SLC22A24Q8N4F4 322 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 CNEP1R1Q8N9A8 125 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 TMEM171Q8WVE6 324 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 SPSB4Q96A44 273 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 MSI2Q96DH6 328 aaKnown RBP5.66□□□□□ -1.5
CSDE1-204ENST00000369530 FOXB1Q99853 325 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 OR10A2Q9H208 303 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 PSMB11A5LHX3 300 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 OR2T8A6NH00 312 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 FCN1O00602 326 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 CRXO43186 299 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-204ENST00000369530 DUSP1P28562 367 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 GRB2P62993 217 aaKnown RBP5.66□□□□□ -1.5
CSDE1-204ENST00000369530 SPIN3Q5JUX0 258 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 PRAMEF5Q5TYX0 476 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 PRAMEF6Q5VXH4 476 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 C12orf54Q6X4T0 127 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 OR2Z1Q8NG97 314 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 OR5A1Q8NGJ0 315 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 PIGCQ92535 297 aa5.66□□□□□ -1.5
CSDE1-204ENST00000369530 NRGNQ92686 78 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms