RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 EEF1E1-BLOC1S5C9J1V9 151 aa1.03□□□□□ -2.24
ECHDC1-201ENST00000368287 ORC5O43913 435 aa1.03□□□□□ -2.24
ECHDC1-201ENST00000368287 NIPSNAP2O75323 286 aa1.03□□□□□ -2.24
ECHDC1-201ENST00000368287 TRGC1P0CF51 173 aa1.03□□□□□ -2.24
ECHDC1-201ENST00000368287 UCHL3P15374 230 aa1.03□□□□□ -2.24
ECHDC1-201ENST00000368287 KCNE1P15382 129 aa1.03□□□□□ -2.24
ECHDC1-201ENST00000368287 NKX2-5P52952 324 aaPredicted RBP1.03□□□□□ -2.24
ECHDC1-201ENST00000368287 POLR2GP62487 172 aaKnown RBP eCLIP1.03□□□□□ -2.24
ECHDC1-201ENST00000368287 BATFQ16520 125 aa1.03□□□□□ -2.24
ECHDC1-201ENST00000368287 C9orf64Q5T6V5 341 aa1.03□□□□□ -2.24
ECHDC1-201ENST00000368287 FAM173BQ6P4H8 233 aa1.03□□□□□ -2.24
ECHDC1-201ENST00000368287 C15orf53Q8NAA6 179 aa1.03□□□□□ -2.24
ECHDC1-201ENST00000368287 SLC35B4Q969S0 331 aa1.03□□□□□ -2.24
ECHDC1-201ENST00000368287 OPTNQ96CV9 577 aa1.03□□□□□ -2.24
ECHDC1-201ENST00000368287 NAA38Q9BRA0 125 aaKnown RBP1.03□□□□□ -2.24
ECHDC1-201ENST00000368287 EFCAB1Q9HAE3 211 aa1.03□□□□□ -2.24
ECHDC1-201ENST00000368287 IL36BQ9NZH7 164 aa1.03□□□□□ -2.24
ECHDC1-201ENST00000368287 TP73-AS1Q9UF72 201 aa1.03□□□□□ -2.24
ECHDC1-201ENST00000368287 PKIGQ9Y2B9 76 aa1.03□□□□□ -2.24
ECHDC1-201ENST00000368287 ADCY9O60503 1353 aa1.03□□□□□ -2.24
ECHDC1-201ENST00000368287 HECW1Q76N89 1606 aa1.03□□□□□ -2.24
ECHDC1-201ENST00000368287 TRBV6-5A0A0K0K1A5 114 aa1.02□□□□□ -2.25
ECHDC1-201ENST00000368287 MEIS3P1A6NDR6 274 aa1.02□□□□□ -2.25
ECHDC1-201ENST00000368287 IBA57-AS1B1ANH7 110 aa1.02□□□□□ -2.25
ECHDC1-201ENST00000368287 CRPP02741 224 aa1.02□□□□□ -2.25
ECHDC1-201ENST00000368287 SULT1A3P0DMM9 295 aa1.02□□□□□ -2.25
ECHDC1-201ENST00000368287 SULT1A4P0DMN0 295 aa1.02□□□□□ -2.25
ECHDC1-201ENST00000368287 HIST1H1EP10412 219 aaKnown RBP1.02□□□□□ -2.25
ECHDC1-201ENST00000368287 DCCP43146 1447 aa1.02□□□□□ -2.25
ECHDC1-201ENST00000368287 HAAOP46952 286 aa1.02□□□□□ -2.25
ECHDC1-201ENST00000368287 KRTAP10-4P60372 401 aaPredicted RBP1.02□□□□□ -2.25
ECHDC1-201ENST00000368287 SUPT4H1P63272 117 aaKnown RBP1.02□□□□□ -2.25
ECHDC1-201ENST00000368287 IFITM2Q01629 132 aa1.02□□□□□ -2.25
ECHDC1-201ENST00000368287 Q1T7F1 81 aa1.02□□□□□ -2.25
ECHDC1-201ENST00000368287 ARHGAP11BQ3KRB8 267 aa1.02□□□□□ -2.25
ECHDC1-201ENST00000368287 FP248Q71RG6 208 aaPredicted RBP1.02□□□□□ -2.25
ECHDC1-201ENST00000368287 STRCQ7RTU9 1775 aa1.02□□□□□ -2.25
ECHDC1-201ENST00000368287 MED12LQ86YW9 2145 aa1.02□□□□□ -2.25
ECHDC1-201ENST00000368287 ROPN1LQ96C74 230 aa1.02□□□□□ -2.25
ECHDC1-201ENST00000368287 GLI3P10071 1580 aa1.01□□□□□ -2.25
ECHDC1-201ENST00000368287 HECW2Q9P2P5 1572 aa1.01□□□□□ -2.25
ECHDC1-201ENST00000368287 SNAPC4Q5SXM2 1469 aa1.01□□□□□ -2.25
ECHDC1-201ENST00000368287 TRBV20OR9-2A0A075B6H5 130 aa1.01□□□□□ -2.25
ECHDC1-201ENST00000368287 DCTN3O75935 186 aa1.01□□□□□ -2.25
ECHDC1-201ENST00000368287 IGHV3-7P01780 117 aa1.01□□□□□ -2.25
ECHDC1-201ENST00000368287 TNNC2P02585 160 aa1.01□□□□□ -2.25
ECHDC1-201ENST00000368287 MSMBP08118 114 aa1.01□□□□□ -2.25
ECHDC1-201ENST00000368287 KRT7P08729 469 aa1.01□□□□□ -2.25
ECHDC1-201ENST00000368287 LYNX1P0DP58 116 aa1.01□□□□□ -2.25
ECHDC1-201ENST00000368287 EMP1P54849 157 aa1.01□□□□□ -2.25
ECHDC1-201ENST00000368287 DEFA1P59665 94 aa1.01□□□□□ -2.25
ECHDC1-201ENST00000368287 HIST1H4AP62805 103 aaKnown RBP1.01□□□□□ -2.25
ECHDC1-201ENST00000368287 RPL18Q07020 188 aaKnown RBP1.01□□□□□ -2.25
ECHDC1-201ENST00000368287 OR2F1Q13607 317 aa1.01□□□□□ -2.25
ECHDC1-201ENST00000368287 NNATQ16517 81 aa1.01□□□□□ -2.25
ECHDC1-201ENST00000368287 HIST2H3PS2Q5TEC6 136 aa1.01□□□□□ -2.25
ECHDC1-201ENST00000368287 C1orf158Q8N1D5 194 aa1.01□□□□□ -2.25
ECHDC1-201ENST00000368287 ZNF439Q8NDP4 499 aa1.01□□□□□ -2.25
ECHDC1-201ENST00000368287 ARL5BQ96KC2 179 aa1.01□□□□□ -2.25
ECHDC1-201ENST00000368287 PPP1R2P1Q96PQ5 205 aa1.01□□□□□ -2.25
ECHDC1-201ENST00000368287 CST9LQ9H4G1 147 aa1.01□□□□□ -2.25
ECHDC1-201ENST00000368287 RSL24D1Q9UHA3 163 aaKnown RBP1.01□□□□□ -2.25
ECHDC1-201ENST00000368287 SMARCA4P51532 1647 aa1□□□□□ -2.25
ECHDC1-201ENST00000368287 AHSA1O95433 338 aa1□□□□□ -2.25
ECHDC1-201ENST00000368287 CLPSP04118 112 aa1□□□□□ -2.25
ECHDC1-201ENST00000368287 PRM2P04554 102 aa1□□□□□ -2.25
ECHDC1-201ENST00000368287 MYL6P60660 151 aa1□□□□□ -2.25
ECHDC1-201ENST00000368287 LPCAT4Q643R3 524 aa1□□□□□ -2.25
ECHDC1-201ENST00000368287 GLT8D1Q68CQ7 371 aa1□□□□□ -2.25
ECHDC1-201ENST00000368287 PTRHD1Q6GMV3 140 aaKnown RBP1□□□□□ -2.25
ECHDC1-201ENST00000368287 MRPS26Q9BYN8 205 aaKnown RBP1□□□□□ -2.25
ECHDC1-201ENST00000368287 WDR61Q9GZS3 305 aaKnown RBP1□□□□□ -2.25
ECHDC1-201ENST00000368287 FAM96AQ9H5X1 160 aa1□□□□□ -2.25
ECHDC1-201ENST00000368287 BAIAP2Q9UQB8 552 aa1□□□□□ -2.25
ECHDC1-201ENST00000368287 LSM5Q9Y4Y9 91 aaKnown RBP1□□□□□ -2.25
ECHDC1-201ENST00000368287 V9GYY5 206 aaPredicted RBP1□□□□□ -2.25
ECHDC1-201ENST00000368287 KIF13BQ9NQT8 1826 aa1□□□□□ -2.25
ECHDC1-201ENST00000368287 ARFGEF3Q5TH69 2177 aa1□□□□□ -2.25
ECHDC1-201ENST00000368287 WRNQ14191 1432 aaPredicted RBP eCLIP0.99□□□□□ -2.25
ECHDC1-201ENST00000368287 TENM1Q9UKZ4 2725 aa0.99□□□□□ -2.25
ECHDC1-201ENST00000368287 KMT2BQ9UMN6 2715 aaPredicted RBP0.99□□□□□ -2.25
ECHDC1-201ENST00000368287 TRBV10-2A0A0K0K1G8 114 aa0.99□□□□□ -2.25
ECHDC1-201ENST00000368287 SLC22A1O15245 554 aa0.99□□□□□ -2.25
ECHDC1-201ENST00000368287 LYPLA2O95372 231 aa0.99□□□□□ -2.25
ECHDC1-201ENST00000368287 IGKV1-5P01602 117 aa0.99□□□□□ -2.25
ECHDC1-201ENST00000368287 SHBGP04278 402 aa0.99□□□□□ -2.25
ECHDC1-201ENST00000368287 OR5G3P0C626 314 aa0.99□□□□□ -2.25
ECHDC1-201ENST00000368287 AKR1C3P42330 323 aa0.99□□□□□ -2.25
ECHDC1-201ENST00000368287 EIF2B2P49770 351 aaKnown RBP0.99□□□□□ -2.25
ECHDC1-201ENST00000368287 SPCS3P61009 180 aa0.99□□□□□ -2.25
ECHDC1-201ENST00000368287 MAGOHP61326 146 aaKnown RBP0.99□□□□□ -2.25
ECHDC1-201ENST00000368287 CCL20P78556 96 aa0.99□□□□□ -2.25
ECHDC1-201ENST00000368287 CAV1Q03135 178 aa0.99□□□□□ -2.25
ECHDC1-201ENST00000368287 ITGB3BPQ13352 177 aaPredicted RBP0.99□□□□□ -2.25
ECHDC1-201ENST00000368287 GRK1Q15835 563 aa0.99□□□□□ -2.25
ECHDC1-201ENST00000368287 IMPG1Q17R60 797 aa0.99□□□□□ -2.25
ECHDC1-201ENST00000368287 AADACL3Q5VUY0 350 aa0.99□□□□□ -2.25
ECHDC1-201ENST00000368287 SYPL2Q5VXT5 272 aa0.99□□□□□ -2.25
ECHDC1-201ENST00000368287 KRTAP5-10Q6L8G5 202 aa0.99□□□□□ -2.25
ECHDC1-201ENST00000368287 Q6ZS49 121 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms