RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 NCOR1O75376 2440 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 GBF1Q92538 1859 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 RAMP1O60894 148 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 TRGC1P0CF51 173 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 DDTP30046 118 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 GLRXP35754 106 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 HIST1H1AQ02539 215 aaPredicted RBP7.63□□□□□ -1.19
SYNE1-205ENST00000367251 FAM159AQ6UWV7 190 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 BIVMQ86UB2 503 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 PMCHL2Q9BQD1 86 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 IGHV3-35A0A0C4DH35 117 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 OR51G1Q8NGK1 321 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 FAM131CQ96AQ9 280 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 DUX3Q96PT4 197 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 LOC389332A0A1B0GUA5 103 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 ZNF415Q09FC8 603 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 CYB5R2Q6BCY4 276 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 C19orf67A6NJJ6 358 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 C2orf83Q53S99 150 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 CLDND2Q8NHS1 167 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 EEF1AKMT3Q96AZ1 226 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 LINC01587Q99440 93 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 CACNA1BQ00975 2339 aa7.63□□□□□ -1.19
SYNE1-205ENST00000367251 A0A1B0GW64 132 aa7.62□□□□□ -1.19
SYNE1-205ENST00000367251 LDLRAD4O15165 306 aa7.62□□□□□ -1.19
SYNE1-205ENST00000367251 RELQ04864 619 aaPredicted RBP7.62□□□□□ -1.19
SYNE1-205ENST00000367251 C17orf82Q86X59 251 aaPredicted RBP7.62□□□□□ -1.19
SYNE1-205ENST00000367251 NABP2Q9BQ15 211 aa7.62□□□□□ -1.19
SYNE1-205ENST00000367251 RPRMQ9NS64 109 aa7.62□□□□□ -1.19
SYNE1-205ENST00000367251 PEMTQ9UBM1 199 aa7.62□□□□□ -1.19
SYNE1-205ENST00000367251 DOCK4Q8N1I0 1966 aa7.62□□□□□ -1.19
SYNE1-205ENST00000367251 FAM186AA6NE01 2351 aa7.62□□□□□ -1.19
SYNE1-205ENST00000367251 LIPFP07098 398 aa7.62□□□□□ -1.19
SYNE1-205ENST00000367251 ZNF25P17030 456 aaPredicted RBP7.62□□□□□ -1.19
SYNE1-205ENST00000367251 CFPP27918 469 aa7.62□□□□□ -1.19
SYNE1-205ENST00000367251 MEF2CQ06413 473 aaPredicted RBP7.62□□□□□ -1.19
SYNE1-205ENST00000367251 SRSF4Q08170 494 aaKnown RBP7.62□□□□□ -1.19
SYNE1-205ENST00000367251 ZNF385CQ66K41 422 aaPredicted RBP7.62□□□□□ -1.19
SYNE1-205ENST00000367251 PAM16Q9Y3D7 125 aa7.62□□□□□ -1.19
SYNE1-205ENST00000367251 DOCK3Q8IZD9 2030 aa7.62□□□□□ -1.19
SYNE1-205ENST00000367251 CCDC88CQ9P219 2028 aa7.62□□□□□ -1.19
SYNE1-205ENST00000367251 OR13A1Q8NGR1 328 aa7.62□□□□□ -1.19
SYNE1-205ENST00000367251 SNRNP200O75643 2136 aaKnown RBP7.62□□□□□ -1.19
SYNE1-205ENST00000367251 TCRBV4S1A1TA0A5B7 111 aa7.62□□□□□ -1.19
SYNE1-205ENST00000367251 C12orf77C9JDV5 145 aa7.62□□□□□ -1.19
SYNE1-205ENST00000367251 IGHV3OR16-13A0A075B7E8 117 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 IGHV3-74A0A0B4J1X5 117 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 LNP1A1A4G5 178 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 RFPL3SP0C7P2 107 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 FCGR2BP31994 310 aaPredicted RBP7.61□□□□□ -1.19
SYNE1-205ENST00000367251 TCTAP57738 103 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 DTX2Q86UW9 622 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 PAQR4Q8N4S7 273 aaPredicted RBP7.61□□□□□ -1.19
SYNE1-205ENST00000367251 GPR82Q96P67 336 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 AURKAIP1Q9NWT8 199 aaPredicted RBP7.61□□□□□ -1.19
SYNE1-205ENST00000367251 TNFRSF18Q9Y5U5 241 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 IGHV1-69-2A0A0G2JMI3 117 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 C17orf51A8MQB3 221 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 IL6RP08887 468 aaPredicted RBP7.61□□□□□ -1.19
SYNE1-205ENST00000367251 LGALS3P17931 250 aaKnown RBP7.61□□□□□ -1.19
SYNE1-205ENST00000367251 RND2P52198 227 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 DLX6P56179 175 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 CX3CL1P78423 397 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 CFHR1Q03591 330 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 LY6DQ14210 128 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 SPATA45Q537H7 98 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 DNM1P46Q6ZS02 220 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 ZNF525Q8N782 197 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 CACNG8Q8WXS5 425 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 PRELID3AQ96N28 172 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 SDF2L1Q9HCN8 221 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 HSPB7Q9UBY9 170 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 PROB1E7EW31 1015 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 RBFOX2O43251 390 aaKnown RBP eCLIP7.61□□□□□ -1.19
SYNE1-205ENST00000367251 FOLR2P14207 255 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 FHITP49789 147 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 RTN4RL2Q86UN3 420 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 STHQ8IWL8 128 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 LYZL4Q96KX0 146 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 A0A0G2JLM5 398 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 B9A039 149 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 GPX4P36969 197 aaPredicted RBP7.61□□□□□ -1.19
SYNE1-205ENST00000367251 VDAC2P45880 294 aaPredicted RBP7.61□□□□□ -1.19
SYNE1-205ENST00000367251 CSRP2Q16527 193 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 PSMG4Q5JS54 123 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 PNKDQ8N490 385 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 IL36BQ9NZH7 164 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 SIGLEC5O15389 551 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 UMODP07911 640 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 WDYHV1Q96HA8 205 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 CLEC7AQ9BXN2 247 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 GPR61Q9BZJ8 451 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 PRDM6Q9NQX0 595 aa7.61□□□□□ -1.19
SYNE1-205ENST00000367251 A0A1B0GW15 77 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 EREGO14944 169 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 FAM166AQ6J272 317 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 LHFPL1Q86WI0 220 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 ABHD12Q8N2K0 398 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 DMRTA2Q96SC8 542 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 ALKBH7Q9BT30 221 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms