RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 BRS3P32247 399 aa0.15□□□□□ -2.39
RNU4-28P-201ENST00000364739 HADHBP55084 474 aaKnown RBP0.15□□□□□ -2.39
RNU4-28P-201ENST00000364739 KISS1Q15726 138 aa0.15□□□□□ -2.39
RNU4-28P-201ENST00000364739 LCN15Q6UWW0 184 aa0.15□□□□□ -2.39
RNU4-28P-201ENST00000364739 HIST2H3AQ71DI3 136 aa0.15□□□□□ -2.39
RNU4-28P-201ENST00000364739 PACRGQ96M98 296 aaPredicted RBP0.15□□□□□ -2.39
RNU4-28P-201ENST00000364739 WDR54Q9H977 334 aa0.15□□□□□ -2.39
RNU4-28P-201ENST00000364739 SYNE2Q8WXH0 6885 aaKnown RBP0.15□□□□□ -2.39
RNU4-28P-201ENST00000364739 TRPC5OSA6NMA1 111 aa0.14□□□□□ -2.39
RNU4-28P-201ENST00000364739 BIRC5O15392 142 aa0.14□□□□□ -2.39
RNU4-28P-201ENST00000364739 OR2T1O43869 369 aa0.14□□□□□ -2.39
RNU4-28P-201ENST00000364739 KRT7P08729 469 aa0.14□□□□□ -2.39
RNU4-28P-201ENST00000364739 NFYAP23511 347 aaPredicted RBP0.14□□□□□ -2.39
RNU4-28P-201ENST00000364739 FKBP2P26885 142 aaKnown RBP0.14□□□□□ -2.39
RNU4-28P-201ENST00000364739 PPP1R1AQ13522 171 aa0.14□□□□□ -2.39
RNU4-28P-201ENST00000364739 FAM78BQ5VT40 261 aa0.14□□□□□ -2.39
RNU4-28P-201ENST00000364739 FUNDC1Q8IVP5 155 aa0.14□□□□□ -2.39
RNU4-28P-201ENST00000364739 C1orf158Q8N1D5 194 aa0.14□□□□□ -2.39
RNU4-28P-201ENST00000364739 LINC00526Q96FQ7 95 aa0.14□□□□□ -2.39
RNU4-28P-201ENST00000364739 DHRS9Q9BPW9 319 aa0.14□□□□□ -2.39
RNU4-28P-201ENST00000364739 OR52A5Q9H2C5 316 aa0.14□□□□□ -2.39
RNU4-28P-201ENST00000364739 SPACA1Q9HBV2 294 aa0.14□□□□□ -2.39
RNU4-28P-201ENST00000364739 AK3Q9UIJ7 227 aa0.14□□□□□ -2.39
RNU4-28P-201ENST00000364739 KLK9Q9UKQ9 250 aa0.14□□□□□ -2.39
RNU4-28P-201ENST00000364739 CACNA1EQ15878 2313 aa0.14□□□□□ -2.39
RNU4-28P-201ENST00000364739 CASP8AP2Q9UKL3 1982 aa0.14□□□□□ -2.39
RNU4-28P-201ENST00000364739 MACF1Q9UPN3 7388 aaKnown RBP0.13□□□□□ -2.39
RNU4-28P-201ENST00000364739 FSIP2Q5CZC0 6907 aa0.13□□□□□ -2.39
RNU4-28P-201ENST00000364739 IGHV1-69-2A0A0G2JMI3 117 aa0.13□□□□□ -2.39
RNU4-28P-201ENST00000364739 OR4C45A6NMZ5 311 aa0.13□□□□□ -2.39
RNU4-28P-201ENST00000364739 YKT6O15498 198 aa0.13□□□□□ -2.39
RNU4-28P-201ENST00000364739 HLA-DRAP01903 254 aa0.13□□□□□ -2.39
RNU4-28P-201ENST00000364739 DDTP30046 118 aa0.13□□□□□ -2.39
RNU4-28P-201ENST00000364739 ZNF80P51504 273 aaPredicted RBP0.13□□□□□ -2.39
RNU4-28P-201ENST00000364739 RPL18Q07020 188 aaKnown RBP0.13□□□□□ -2.39
RNU4-28P-201ENST00000364739 ZNF550Q7Z398 422 aa0.13□□□□□ -2.39
RNU4-28P-201ENST00000364739 Q8N814 137 aa0.13□□□□□ -2.39
RNU4-28P-201ENST00000364739 SLC50A1Q9BRV3 221 aa0.13□□□□□ -2.39
RNU4-28P-201ENST00000364739 IL36BQ9NZH7 164 aa0.13□□□□□ -2.39
RNU4-28P-201ENST00000364739 RSL24D1Q9UHA3 163 aaKnown RBP0.13□□□□□ -2.39
RNU4-28P-201ENST00000364739 MED12Q93074 2177 aa0.13□□□□□ -2.39
RNU4-28P-201ENST00000364739 C1orf232A0A0U1RR37 186 aa0.12□□□□□ -2.39
RNU4-28P-201ENST00000364739 HPGDSO60760 199 aa0.12□□□□□ -2.39
RNU4-28P-201ENST00000364739 OR5F1O95221 314 aa0.12□□□□□ -2.39
RNU4-28P-201ENST00000364739 SRP19P09132 144 aaKnown RBP0.12□□□□□ -2.39
RNU4-28P-201ENST00000364739 ASAH2BP0C7U1 165 aa0.12□□□□□ -2.39
RNU4-28P-201ENST00000364739 FAM228BP0C875 321 aa0.12□□□□□ -2.39
RNU4-28P-201ENST00000364739 MAP2K4P45985 399 aa0.12□□□□□ -2.39
RNU4-28P-201ENST00000364739 POLR2GP62487 172 aaKnown RBP eCLIP0.12□□□□□ -2.39
RNU4-28P-201ENST00000364739 SDHAF4Q5VUM1 108 aa0.12□□□□□ -2.39
RNU4-28P-201ENST00000364739 TMEM161BQ8NDZ6 487 aa0.12□□□□□ -2.39
RNU4-28P-201ENST00000364739 SMIM19Q96E16 107 aa0.12□□□□□ -2.39
RNU4-28P-201ENST00000364739 SMR3AQ99954 134 aa0.12□□□□□ -2.39
RNU4-28P-201ENST00000364739 DKKL1Q9UK85 242 aa0.12□□□□□ -2.39
RNU4-28P-201ENST00000364739 TMEM213A2RRL7 107 aa0.11□□□□□ -2.39
RNU4-28P-201ENST00000364739 FUOMA2VDF0 154 aa0.11□□□□□ -2.39
RNU4-28P-201ENST00000364739 C2orf70A6NJV1 201 aa0.11□□□□□ -2.39
RNU4-28P-201ENST00000364739 NOS1APO75052 506 aaPredicted RBP0.11□□□□□ -2.39
RNU4-28P-201ENST00000364739 YEATS4O95619 227 aa0.11□□□□□ -2.39
RNU4-28P-201ENST00000364739 CDC34P49427 236 aaPredicted RBP0.11□□□□□ -2.39
RNU4-28P-201ENST00000364739 SYPL2Q5VXT5 272 aa0.11□□□□□ -2.39
RNU4-28P-201ENST00000364739 DNAJB3Q8WWF6 145 aa0.11□□□□□ -2.39
RNU4-28P-201ENST00000364739 C11orf40Q8WZ69 217 aa0.11□□□□□ -2.39
RNU4-28P-201ENST00000364739 AMELYQ99218 206 aa0.11□□□□□ -2.39
RNU4-28P-201ENST00000364739 CISHQ9NSE2 258 aa0.11□□□□□ -2.39
RNU4-28P-201ENST00000364739 IQCF5A8MTL0 148 aa0.1□□□□□ -2.39
RNU4-28P-201ENST00000364739 F5H768 121 aa0.1□□□□□ -2.39
RNU4-28P-201ENST00000364739 C1QAP02745 245 aa0.1□□□□□ -2.39
RNU4-28P-201ENST00000364739 FGF6P10767 208 aa0.1□□□□□ -2.39
RNU4-28P-201ENST00000364739 DMTNQ08495 405 aa0.1□□□□□ -2.39
RNU4-28P-201ENST00000364739 FABP9Q0Z7S8 132 aa0.1□□□□□ -2.39
RNU4-28P-201ENST00000364739 ZNF826PQ6ZT77 177 aa0.1□□□□□ -2.39
RNU4-28P-201ENST00000364739 SLC51BQ86UW2 128 aa0.1□□□□□ -2.39
RNU4-28P-201ENST00000364739 LINC00471Q8N535 108 aa0.1□□□□□ -2.39
RNU4-28P-201ENST00000364739 LINC00311Q8N616 119 aa0.1□□□□□ -2.39
RNU4-28P-201ENST00000364739 JOSD2Q8TAC2 188 aa0.1□□□□□ -2.39
RNU4-28P-201ENST00000364739 ZNF418Q8TF45 676 aaPredicted RBP0.1□□□□□ -2.39
RNU4-28P-201ENST00000364739 TMEM106AQ96A25 262 aa0.1□□□□□ -2.39
RNU4-28P-201ENST00000364739 DCUN1D5Q9BTE7 237 aa0.1□□□□□ -2.39
RNU4-28P-201ENST00000364739 FABP5P3A8MUU1 101 aa0.09□□□□□ -2.4
RNU4-28P-201ENST00000364739 GOLGA8MH3BSY2 632 aa0.09□□□□□ -2.4
RNU4-28P-201ENST00000364739 HYPMO75409 117 aa0.09□□□□□ -2.4
RNU4-28P-201ENST00000364739 KRT75O95678 551 aa0.09□□□□□ -2.4
RNU4-28P-201ENST00000364739 IL3P08700 152 aa0.09□□□□□ -2.4
RNU4-28P-201ENST00000364739 CRYGAP11844 174 aa0.09□□□□□ -2.4
RNU4-28P-201ENST00000364739 SPI1P17947 270 aa0.09□□□□□ -2.4
RNU4-28P-201ENST00000364739 MAP3K7CLP57077 242 aa0.09□□□□□ -2.4
RNU4-28P-201ENST00000364739 RSU1Q15404 277 aa0.09□□□□□ -2.4
RNU4-28P-201ENST00000364739 GDF5OSQ5U4N7 250 aa0.09□□□□□ -2.4
RNU4-28P-201ENST00000364739 SYCE1Q8N0S2 351 aa0.09□□□□□ -2.4
RNU4-28P-201ENST00000364739 NDEL1Q9GZM8 345 aa0.09□□□□□ -2.4
RNU4-28P-201ENST00000364739 C10orf95Q9H7T3 257 aa0.09□□□□□ -2.4
RNU4-28P-201ENST00000364739 EFCAB1Q9HAE3 211 aa0.09□□□□□ -2.4
RNU4-28P-201ENST00000364739 FKBP14Q9NWM8 211 aa0.09□□□□□ -2.4
RNU4-28P-201ENST00000364739 POLR1DQ9Y2S0 133 aa0.09□□□□□ -2.4
RNU4-28P-201ENST00000364739 DOCK3Q8IZD9 2030 aa0.09□□□□□ -2.4
RNU4-28P-201ENST00000364739 KIF13BQ9NQT8 1826 aa0.08□□□□□ -2.4
RNU4-28P-201ENST00000364739 SSPOA2VEC9 5147 aa0.08□□□□□ -2.4
RNU4-28P-201ENST00000364739 CTSDP07339 412 aaPredicted RBP0.08□□□□□ -2.4
RNU4-28P-201ENST00000364739 Q6ZQT0 140 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms