RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 FBLL1A6NHQ2 334 aaKnown RBP11.67□□□□□ -0.54
COL6A1-201ENST00000361866 B4E171 279 aa11.67□□□□□ -0.54
COL6A1-201ENST00000361866 TSPAN7P41732 249 aa11.67□□□□□ -0.54
COL6A1-201ENST00000361866 RBPJQ06330 500 aa11.67□□□□□ -0.54
COL6A1-201ENST00000361866 PRB4P10163 310 aaPredicted RBP11.66□□□□□ -0.54
COL6A1-201ENST00000361866 FAM53AQ6NSI3 398 aaPredicted RBP11.66□□□□□ -0.54
COL6A1-201ENST00000361866 S100A7AQ86SG5 101 aa11.66□□□□□ -0.54
COL6A1-201ENST00000361866 GAL3ST2Q9H3Q3 398 aa11.66□□□□□ -0.54
COL6A1-201ENST00000361866 ANAPC10Q9UM13 185 aa11.66□□□□□ -0.54
COL6A1-201ENST00000361866 LOC389332A0A1B0GUA5 103 aa11.66□□□□□ -0.54
COL6A1-201ENST00000361866 EREGO14944 169 aa11.66□□□□□ -0.54
COL6A1-201ENST00000361866 GPR6P46095 362 aaPredicted RBP11.66□□□□□ -0.54
COL6A1-201ENST00000361866 RPL11P62913 178 aaKnown RBP11.66□□□□□ -0.54
COL6A1-201ENST00000361866 TMEM242Q9NWH2 141 aa11.66□□□□□ -0.54
COL6A1-201ENST00000361866 IL36BQ9NZH7 164 aa11.66□□□□□ -0.54
COL6A1-201ENST00000361866 NKX2-8O15522 239 aa11.66□□□□□ -0.54
COL6A1-201ENST00000361866 RND2P52198 227 aa11.66□□□□□ -0.54
COL6A1-201ENST00000361866 HOXA4Q00056 320 aaPredicted RBP11.66□□□□□ -0.54
COL6A1-201ENST00000361866 TMEM42Q69YG0 159 aa11.66□□□□□ -0.54
COL6A1-201ENST00000361866 OR8B2Q96RD0 313 aa11.66□□□□□ -0.54
COL6A1-201ENST00000361866 TRAV1-1A0A0B4J248 108 aa11.65□□□□□ -0.54
COL6A1-201ENST00000361866 ISLRO14498 428 aa11.65□□□□□ -0.54
COL6A1-201ENST00000361866 OR2J3O76001 311 aa11.65□□□□□ -0.54
COL6A1-201ENST00000361866 UQCRFS1P47985 274 aa11.65□□□□□ -0.54
COL6A1-201ENST00000361866 GNB2P62879 340 aa11.65□□□□□ -0.54
COL6A1-201ENST00000361866 LINC01551Q86U37 167 aa11.65□□□□□ -0.54
COL6A1-201ENST00000361866 FAM222BQ8WU58 562 aa11.65□□□□□ -0.54
COL6A1-201ENST00000361866 NPIPB3Q92617 1050 aa11.65□□□□□ -0.54
COL6A1-201ENST00000361866 PGLYRP4Q96LB8 373 aa11.65□□□□□ -0.54
COL6A1-201ENST00000361866 LINC00470Q9BZP3 86 aa11.65□□□□□ -0.54
COL6A1-201ENST00000361866 SAP30LQ9HAJ7 183 aa11.65□□□□□ -0.54
COL6A1-201ENST00000361866 C8orf88P0DMB2 117 aa11.65□□□□□ -0.54
COL6A1-201ENST00000361866 PCSK4Q6UW60 755 aa11.65□□□□□ -0.54
COL6A1-201ENST00000361866 PCDH15Q96QU1 1955 aa11.65□□□□□ -0.54
COL6A1-201ENST00000361866 LOC102723996A0A087X1L8 192 aa11.65□□□□□ -0.54
COL6A1-201ENST00000361866 SNAI2O43623 268 aa11.65□□□□□ -0.54
COL6A1-201ENST00000361866 PAX9P55771 341 aa11.65□□□□□ -0.54
COL6A1-201ENST00000361866 PRNTQ86SH4 94 aa11.65□□□□□ -0.54
COL6A1-201ENST00000361866 MAP1LC3CQ9BXW4 147 aa11.65□□□□□ -0.54
COL6A1-201ENST00000361866 C21orf140B9A014 251 aa11.65□□□□□ -0.55
COL6A1-201ENST00000361866 J3QR89 54 aa11.65□□□□□ -0.55
COL6A1-201ENST00000361866 FAM87AP0C7U9 286 aa11.65□□□□□ -0.55
COL6A1-201ENST00000361866 SLC35E4Q6ICL7 350 aa11.65□□□□□ -0.55
COL6A1-201ENST00000361866 RPEQ96AT9 228 aa11.65□□□□□ -0.55
COL6A1-201ENST00000361866 NEU1Q99519 415 aa11.65□□□□□ -0.55
COL6A1-201ENST00000361866 NRN1Q9NPD7 142 aa11.65□□□□□ -0.55
COL6A1-201ENST00000361866 ASCL3Q9NQ33 180 aa11.65□□□□□ -0.55
COL6A1-201ENST00000361866 CLEC3BP05452 202 aa11.64□□□□□ -0.55
COL6A1-201ENST00000361866 NTF4P34130 210 aa11.64□□□□□ -0.55
COL6A1-201ENST00000361866 LYPD6Q86Y78 171 aa11.64□□□□□ -0.55
COL6A1-201ENST00000361866 OR4F17Q8NGA8 305 aa11.64□□□□□ -0.55
COL6A1-201ENST00000361866 TMEM45BQ96B21 275 aa11.64□□□□□ -0.55
COL6A1-201ENST00000361866 GTF3C1Q12789 2109 aa11.64□□□□□ -0.55
COL6A1-201ENST00000361866 MKI67P46013 3256 aaKnown RBP11.64□□□□□ -0.55
COL6A1-201ENST00000361866 LEPROTL1O95214 131 aa11.64□□□□□ -0.55
COL6A1-201ENST00000361866 OR9G9P0C7N8 305 aa11.64□□□□□ -0.55
COL6A1-201ENST00000361866 MAS1LP35410 378 aa11.64□□□□□ -0.55
COL6A1-201ENST00000361866 LHX2P50458 406 aa11.64□□□□□ -0.55
COL6A1-201ENST00000361866 MMDQ15546 238 aa11.64□□□□□ -0.55
COL6A1-201ENST00000361866 OR4A47Q6IF82 309 aa11.64□□□□□ -0.55
COL6A1-201ENST00000361866 ACP7Q6ZNF0 438 aa11.64□□□□□ -0.55
COL6A1-201ENST00000361866 ZNF497Q6ZNH5 498 aa11.64□□□□□ -0.55
COL6A1-201ENST00000361866 VSTM2AQ8TAG5 236 aa11.64□□□□□ -0.55
COL6A1-201ENST00000361866 IFITM10A6NMD0 228 aa11.64□□□□□ -0.55
COL6A1-201ENST00000361866 NCBP2LA6PVI3 153 aaKnown RBP11.64□□□□□ -0.55
COL6A1-201ENST00000361866 MKRN2OSH3BPM6 223 aa11.64□□□□□ -0.55
COL6A1-201ENST00000361866 K7ESF4 209 aa11.64□□□□□ -0.55
COL6A1-201ENST00000361866 RELBQ01201 579 aa11.64□□□□□ -0.55
COL6A1-201ENST00000361866 PEAR1Q5VY43 1037 aaPredicted RBP11.64□□□□□ -0.55
COL6A1-201ENST00000361866 SLC25A17O43808 307 aa11.63□□□□□ -0.55
COL6A1-201ENST00000361866 NUTF2P61970 127 aaKnown RBP11.63□□□□□ -0.55
COL6A1-201ENST00000361866 VWA1Q6PCB0 445 aa11.63□□□□□ -0.55
COL6A1-201ENST00000361866 TEX38Q6PEX7 206 aa11.63□□□□□ -0.55
COL6A1-201ENST00000361866 SSBP4Q9BWG4 385 aaPredicted RBP11.63□□□□□ -0.55
COL6A1-201ENST00000361866 HSPB7Q9UBY9 170 aa11.63□□□□□ -0.55
COL6A1-201ENST00000361866 SELENOKQ9Y6D0 94 aa11.63□□□□□ -0.55
COL6A1-201ENST00000361866 CLDN18P56856 261 aa11.63□□□□□ -0.55
COL6A1-201ENST00000361866 GBGT1Q8N5D6 347 aa11.63□□□□□ -0.55
COL6A1-201ENST00000361866 OR8B3Q8NGG8 313 aa11.63□□□□□ -0.55
COL6A1-201ENST00000361866 MOSP00540 346 aa11.63□□□□□ -0.55
COL6A1-201ENST00000361866 TIMP3P35625 211 aa11.63□□□□□ -0.55
COL6A1-201ENST00000361866 RPL8P62917 257 aaKnown RBP11.63□□□□□ -0.55
COL6A1-201ENST00000361866 SPATA31B1PQ5VZV4 182 aa11.63□□□□□ -0.55
COL6A1-201ENST00000361866 MIEN1Q9BRT3 115 aa11.63□□□□□ -0.55
COL6A1-201ENST00000361866 AAMDCQ9H7C9 122 aa11.63□□□□□ -0.55
COL6A1-201ENST00000361866 TEX50A0A1B0GTY4 177 aa11.62□□□□□ -0.55
COL6A1-201ENST00000361866 LNP1A1A4G5 178 aa11.62□□□□□ -0.55
COL6A1-201ENST00000361866 A8MWL6 223 aa11.62□□□□□ -0.55
COL6A1-201ENST00000361866 AMY1AP04745 511 aa11.62□□□□□ -0.55
COL6A1-201ENST00000361866 TMEM177Q53S58 311 aa11.62□□□□□ -0.55
COL6A1-201ENST00000361866 WDR83OSQ9Y284 106 aa11.62□□□□□ -0.55
COL6A1-201ENST00000361866 YLPM1P49750 1951 aaKnown RBP11.62□□□□□ -0.55
COL6A1-201ENST00000361866 SFTPCP11686 197 aa11.62□□□□□ -0.55
COL6A1-201ENST00000361866 ZNF726P1Q15940 193 aa11.62□□□□□ -0.55
COL6A1-201ENST00000361866 CRIM1Q9NZV1 1036 aa11.62□□□□□ -0.55
COL6A1-201ENST00000361866 SPG11Q96JI7 2443 aa11.62□□□□□ -0.55
COL6A1-201ENST00000361866 CECR9P0C854 216 aa11.62□□□□□ -0.55
COL6A1-201ENST00000361866 TMEM108Q6UXF1 575 aa11.62□□□□□ -0.55
COL6A1-201ENST00000361866 PERPQ96FX8 193 aa11.62□□□□□ -0.55
COL6A1-201ENST00000361866 PMCHL2Q9BQD1 86 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms