RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 TSPOP30536 169 aa15.58■□□□□ 0.09
CLIP2-202ENST00000361545 TXNDC17Q9BRA2 123 aa15.58■□□□□ 0.09
CLIP2-202ENST00000361545 SAA2-SAA4A0A096LPE2 208 aa15.58■□□□□ 0.08
CLIP2-202ENST00000361545 SAA2P0DJI9 122 aaPredicted RBP15.58■□□□□ 0.08
CLIP2-202ENST00000361545 ANK1P16157 1881 aa15.58■□□□□ 0.08
CLIP2-202ENST00000361545 CYP2G1PQ6ZSU1 146 aa15.58■□□□□ 0.08
CLIP2-202ENST00000361545 PLSCR4Q9NRQ2 329 aa15.58■□□□□ 0.08
CLIP2-202ENST00000361545 C19orf67A6NJJ6 358 aa15.58■□□□□ 0.08
CLIP2-202ENST00000361545 FAM53AQ6NSI3 398 aaPredicted RBP15.58■□□□□ 0.08
CLIP2-202ENST00000361545 NMBP08949 121 aa15.58■□□□□ 0.08
CLIP2-202ENST00000361545 NEUROG3Q9Y4Z2 214 aa15.58■□□□□ 0.08
CLIP2-202ENST00000361545 OR10S1Q8NGN2 331 aa15.58■□□□□ 0.08
CLIP2-202ENST00000361545 ERVH48-1M5A8F1 160 aa15.57■□□□□ 0.08
CLIP2-202ENST00000361545 HSPB8Q9UJY1 196 aa15.57■□□□□ 0.08
CLIP2-202ENST00000361545 GATAD1Q8WUU5 269 aa15.57■□□□□ 0.08
CLIP2-202ENST00000361545 ELOVL1Q9BW60 279 aa15.57■□□□□ 0.08
CLIP2-202ENST00000361545 SMDT1Q9H4I9 107 aa15.57■□□□□ 0.08
CLIP2-202ENST00000361545 BET1LQ9NYM9 111 aa15.57■□□□□ 0.08
CLIP2-202ENST00000361545 IL6RP08887 468 aaPredicted RBP15.57■□□□□ 0.08
CLIP2-202ENST00000361545 FAM209BQ5JX69 171 aa15.57■□□□□ 0.08
CLIP2-202ENST00000361545 TMEM133Q9H2Q1 129 aa15.57■□□□□ 0.08
CLIP2-202ENST00000361545 ZNF343Q6P1L6 599 aa15.57■□□□□ 0.08
CLIP2-202ENST00000361545 ITLN2Q8WWU7 325 aaPredicted RBP15.57■□□□□ 0.08
CLIP2-202ENST00000361545 SRSF9Q13242 221 aaKnown RBP eCLIP15.56■□□□□ 0.08
CLIP2-202ENST00000361545 ICAM4Q14773 271 aa15.56■□□□□ 0.08
CLIP2-202ENST00000361545 OR11H4Q8NGC9 324 aa15.56■□□□□ 0.08
CLIP2-202ENST00000361545 PSMB2P49721 201 aa15.56■□□□□ 0.08
CLIP2-202ENST00000361545 PAQR4Q8N4S7 273 aaPredicted RBP15.56■□□□□ 0.08
CLIP2-202ENST00000361545 SPSB4Q96A44 273 aa15.56■□□□□ 0.08
CLIP2-202ENST00000361545 DMRTA2Q96SC8 542 aa15.56■□□□□ 0.08
CLIP2-202ENST00000361545 A0A0G2JNJ9 132 aa15.56■□□□□ 0.08
CLIP2-202ENST00000361545 NPIPB6E9PJ23 425 aa15.56■□□□□ 0.08
CLIP2-202ENST00000361545 CD99P14209 185 aa15.56■□□□□ 0.08
CLIP2-202ENST00000361545 IGFBP2P18065 325 aa15.56■□□□□ 0.08
CLIP2-202ENST00000361545 ZNF672Q499Z4 452 aaPredicted RBP15.56■□□□□ 0.08
CLIP2-202ENST00000361545 C2orf83Q53S99 150 aa15.56■□□□□ 0.08
CLIP2-202ENST00000361545 MDS2Q8NDY4 140 aa15.56■□□□□ 0.08
CLIP2-202ENST00000361545 TBX15Q96SF7 602 aa15.56■□□□□ 0.08
CLIP2-202ENST00000361545 Q9UFV3 132 aa15.56■□□□□ 0.08
CLIP2-202ENST00000361545 TRAV40A0A0B4J280 105 aa15.56■□□□□ 0.08
CLIP2-202ENST00000361545 AREGP15514 252 aa15.56■□□□□ 0.08
CLIP2-202ENST00000361545 C11orf44Q8N8P7 122 aa15.56■□□□□ 0.08
CLIP2-202ENST00000361545 MRPL32Q9BYC8 188 aaKnown RBP15.56■□□□□ 0.08
CLIP2-202ENST00000361545 NPFFR1Q9GZQ6 430 aa15.56■□□□□ 0.08
CLIP2-202ENST00000361545 MSRB2Q9Y3D2 182 aa15.56■□□□□ 0.08
CLIP2-202ENST00000361545 SAA1P0DJI8 122 aaPredicted RBP15.55■□□□□ 0.08
CLIP2-202ENST00000361545 UCP1P25874 307 aa15.55■□□□□ 0.08
CLIP2-202ENST00000361545 WNT10AQ9GZT5 417 aa15.55■□□□□ 0.08
CLIP2-202ENST00000361545 RND3P61587 244 aa15.55■□□□□ 0.08
CLIP2-202ENST00000361545 RELBQ01201 579 aa15.55■□□□□ 0.08
CLIP2-202ENST00000361545 NEU1Q99519 415 aa15.55■□□□□ 0.08
CLIP2-202ENST00000361545 C19orf24Q9BVV8 132 aa15.55■□□□□ 0.08
CLIP2-202ENST00000361545 NBR2O15453 112 aa15.55■□□□□ 0.08
CLIP2-202ENST00000361545 CLPSP04118 112 aa15.55■□□□□ 0.08
CLIP2-202ENST00000361545 EGR1P18146 543 aa15.55■□□□□ 0.08
CLIP2-202ENST00000361545 ATP5IP56385 69 aaPredicted RBP15.55■□□□□ 0.08
CLIP2-202ENST00000361545 ZNF502Q8TBZ5 544 aa15.55■□□□□ 0.08
CLIP2-202ENST00000361545 IFITM2Q01629 132 aa15.55■□□□□ 0.08
CLIP2-202ENST00000361545 TRAV24A0A0B4J272 114 aa15.54■□□□□ 0.08
CLIP2-202ENST00000361545 GCHFRP30047 84 aa15.54■□□□□ 0.08
CLIP2-202ENST00000361545 C19orf54Q5BKX5 351 aa15.54■□□□□ 0.08
CLIP2-202ENST00000361545 FAM159AQ6UWV7 190 aa15.54■□□□□ 0.08
CLIP2-202ENST00000361545 RTBDNQ9BSG5 229 aaPredicted RBP15.54■□□□□ 0.08
CLIP2-202ENST00000361545 PLSCR2Q9NRY7 297 aa15.54■□□□□ 0.08
CLIP2-202ENST00000361545 IL18BPO95998 194 aa15.54■□□□□ 0.08
CLIP2-202ENST00000361545 METRNQ9UJH8 293 aa15.54■□□□□ 0.08
CLIP2-202ENST00000361545 KIF26BQ2KJY2 2108 aa15.54■□□□□ 0.08
CLIP2-202ENST00000361545 ABCA4P78363 2273 aa15.54■□□□□ 0.08
CLIP2-202ENST00000361545 ACAA1P09110 424 aaPredicted RBP15.54■□□□□ 0.08
CLIP2-202ENST00000361545 PKIAP61925 76 aa15.54■□□□□ 0.08
CLIP2-202ENST00000361545 PLAURQ03405 335 aa15.54■□□□□ 0.08
CLIP2-202ENST00000361545 CLDND2Q8NHS1 167 aa15.54■□□□□ 0.08
CLIP2-202ENST00000361545 CD69Q07108 199 aa15.54■□□□□ 0.08
CLIP2-202ENST00000361545 DHRS11Q6UWP2 260 aa15.54■□□□□ 0.08
CLIP2-202ENST00000361545 IGKV1D-13A0A0B4J2D9 117 aa15.54■□□□□ 0.08
CLIP2-202ENST00000361545 C9JCJ5 164 aa15.54■□□□□ 0.08
CLIP2-202ENST00000361545 IGKV1-13P0DP09 117 aa15.54■□□□□ 0.08
CLIP2-202ENST00000361545 SMAGPQ0VAQ4 97 aa15.54■□□□□ 0.08
CLIP2-202ENST00000361545 NPCDR1Q9BY65 106 aa15.54■□□□□ 0.08
CLIP2-202ENST00000361545 TRBV6-7A0A0A0MS04 114 aa15.53■□□□□ 0.08
CLIP2-202ENST00000361545 CRYGSP22914 178 aa15.53■□□□□ 0.08
CLIP2-202ENST00000361545 GALNT14Q96FL9 552 aa15.53■□□□□ 0.08
CLIP2-202ENST00000361545 VWA8A3KMH1 1905 aa15.53■□□□□ 0.08
CLIP2-202ENST00000361545 M0R3E3 92 aa15.53■□□□□ 0.08
CLIP2-202ENST00000361545 TFF3Q07654 80 aa15.53■□□□□ 0.08
CLIP2-202ENST00000361545 MORN2Q502X0 79 aa15.53■□□□□ 0.08
CLIP2-202ENST00000361545 SELLP14151 372 aa15.53■□□□□ 0.08
CLIP2-202ENST00000361545 ZNF56Q15929 161 aa15.53■□□□□ 0.08
CLIP2-202ENST00000361545 OR1N2Q8NGR9 330 aa15.53■□□□□ 0.08
CLIP2-202ENST00000361545 FAM131CQ96AQ9 280 aa15.53■□□□□ 0.08
CLIP2-202ENST00000361545 IGKV3OR2-268A0A0C4DH90 116 aa15.53■□□□□ 0.08
CLIP2-202ENST00000361545 CCL1P22362 96 aa15.53■□□□□ 0.08
CLIP2-202ENST00000361545 GATA2P23769 480 aaPredicted RBP15.53■□□□□ 0.08
CLIP2-202ENST00000361545 OR4C46A6NHA9 309 aa15.52■□□□□ 0.08
CLIP2-202ENST00000361545 NUTF2P61970 127 aaKnown RBP15.52■□□□□ 0.08
CLIP2-202ENST00000361545 NR2C2APQ86WQ0 139 aa15.52■□□□□ 0.08
CLIP2-202ENST00000361545 M0QZK8 103 aa15.52■□□□□ 0.08
CLIP2-202ENST00000361545 YPEL1O60688 119 aa15.52■□□□□ 0.08
CLIP2-202ENST00000361545 GGCTO75223 188 aaKnown RBP15.52■□□□□ 0.08
CLIP2-202ENST00000361545 MBNL2Q5VZF2 373 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms