RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 PEAR1Q5VY43 1037 aaPredicted RBP11.29□□□□□ -0.6
LDB3-202ENST00000361373 NUP37Q8NFH4 326 aa11.29□□□□□ -0.6
LDB3-202ENST00000361373 TRAV24A0A0B4J272 114 aa11.28□□□□□ -0.6
LDB3-202ENST00000361373 NAT1P18440 290 aa11.28□□□□□ -0.6
LDB3-202ENST00000361373 PACRGQ96M98 296 aaPredicted RBP11.28□□□□□ -0.6
LDB3-202ENST00000361373 VENTXO95231 258 aa11.28□□□□□ -0.6
LDB3-202ENST00000361373 CCL3L1P16619 93 aa11.28□□□□□ -0.6
LDB3-202ENST00000361373 YAE1D1Q9NRH1 226 aa11.28□□□□□ -0.6
LDB3-202ENST00000361373 ESPL1Q14674 2120 aa11.28□□□□□ -0.6
LDB3-202ENST00000361373 OOSP1A8MZH6 123 aa11.28□□□□□ -0.6
LDB3-202ENST00000361373 CRYBB3P26998 211 aa11.28□□□□□ -0.6
LDB3-202ENST00000361373 PET117Q6UWS5 81 aa11.28□□□□□ -0.6
LDB3-202ENST00000361373 ZNF319Q9P2F9 582 aa11.28□□□□□ -0.6
LDB3-202ENST00000361373 NBEAP1P0C6P0 100 aa11.28□□□□□ -0.6
LDB3-202ENST00000361373 MYOD1P15172 320 aa11.28□□□□□ -0.6
LDB3-202ENST00000361373 BET1LQ9NYM9 111 aa11.28□□□□□ -0.6
LDB3-202ENST00000361373 SPTBN1Q01082 2364 aaKnown RBP11.27□□□□□ -0.6
LDB3-202ENST00000361373 PLXNA3P51805 1871 aa11.27□□□□□ -0.6
LDB3-202ENST00000361373 SAA2-SAA4A0A096LPE2 208 aa11.27□□□□□ -0.6
LDB3-202ENST00000361373 SAA2P0DJI9 122 aaPredicted RBP11.27□□□□□ -0.6
LDB3-202ENST00000361373 FAM53AQ6NSI3 398 aaPredicted RBP11.27□□□□□ -0.6
LDB3-202ENST00000361373 TCF24Q7RTU0 167 aa11.27□□□□□ -0.61
LDB3-202ENST00000361373 TMEM144Q7Z5S9 345 aa11.27□□□□□ -0.61
LDB3-202ENST00000361373 FGFBP3Q8TAT2 258 aa11.27□□□□□ -0.61
LDB3-202ENST00000361373 ZNF672Q499Z4 452 aaPredicted RBP11.27□□□□□ -0.61
LDB3-202ENST00000361373 GPR82Q96P67 336 aa11.27□□□□□ -0.61
LDB3-202ENST00000361373 SNRPCP09234 159 aaKnown RBP11.27□□□□□ -0.61
LDB3-202ENST00000361373 RPRMQ9NS64 109 aa11.27□□□□□ -0.61
LDB3-202ENST00000361373 TRBV9A0A0B4J1U6 114 aa11.26□□□□□ -0.61
LDB3-202ENST00000361373 PRR32B1ATL7 298 aa11.26□□□□□ -0.61
LDB3-202ENST00000361373 FAM159AQ6UWV7 190 aa11.26□□□□□ -0.61
LDB3-202ENST00000361373 OR11H4Q8NGC9 324 aa11.26□□□□□ -0.61
LDB3-202ENST00000361373 WFIKKN1Q96NZ8 548 aa11.26□□□□□ -0.61
LDB3-202ENST00000361373 PEMTQ9UBM1 199 aa11.26□□□□□ -0.61
LDB3-202ENST00000361373 ZFP30Q9Y2G7 519 aa11.26□□□□□ -0.61
LDB3-202ENST00000361373 MGAMO43451 1857 aa11.26□□□□□ -0.61
LDB3-202ENST00000361373 B3GALT5-AS1P59052 145 aa11.26□□□□□ -0.61
LDB3-202ENST00000361373 AMMECR1LQ6DCA0 310 aa11.26□□□□□ -0.61
LDB3-202ENST00000361373 RPUSD1Q9UJJ7 312 aaKnown RBP11.26□□□□□ -0.61
LDB3-202ENST00000361373 SAA1P0DJI8 122 aaPredicted RBP11.26□□□□□ -0.61
LDB3-202ENST00000361373 ZP1P60852 638 aa11.26□□□□□ -0.61
LDB3-202ENST00000361373 CACNA1DQ01668 2161 aa11.26□□□□□ -0.61
LDB3-202ENST00000361373 GOLT1AQ6ZVE7 132 aa11.26□□□□□ -0.61
LDB3-202ENST00000361373 SRSF12Q8WXF0 261 aaKnown RBP11.26□□□□□ -0.61
LDB3-202ENST00000361373 RCC1LQ96I51 464 aaKnown RBP11.26□□□□□ -0.61
LDB3-202ENST00000361373 MSGN1A6NI15 193 aa11.26□□□□□ -0.61
LDB3-202ENST00000361373 CGB1A6NKQ9 187 aa11.26□□□□□ -0.61
LDB3-202ENST00000361373 SMIM6P0DI80 62 aa11.26□□□□□ -0.61
LDB3-202ENST00000361373 AGAP20933 346 aa11.26□□□□□ -0.61
LDB3-202ENST00000361373 ZNF506Q5JVG8 444 aa11.26□□□□□ -0.61
LDB3-202ENST00000361373 GTF2H5Q6ZYL4 71 aa11.26□□□□□ -0.61
LDB3-202ENST00000361373 AP5S1Q9NUS5 200 aa11.26□□□□□ -0.61
LDB3-202ENST00000361373 PI4KAP42356 2102 aa11.26□□□□□ -0.61
LDB3-202ENST00000361373 C15orf61A6NNL5 157 aa11.25□□□□□ -0.61
LDB3-202ENST00000361373 K7ENP7 123 aa11.25□□□□□ -0.61
LDB3-202ENST00000361373 TMEM190Q8WZ59 177 aa11.25□□□□□ -0.61
LDB3-202ENST00000361373 MAP1LC3AQ9H492 121 aa11.25□□□□□ -0.61
LDB3-202ENST00000361373 METRNQ9UJH8 293 aa11.25□□□□□ -0.61
LDB3-202ENST00000361373 SH3BGRL3Q9H299 93 aa11.25□□□□□ -0.61
LDB3-202ENST00000361373 FOXA2Q9Y261 457 aaPredicted RBP11.25□□□□□ -0.61
LDB3-202ENST00000361373 AKAP6Q13023 2319 aa11.25□□□□□ -0.61
LDB3-202ENST00000361373 RPL29P47914 159 aaKnown RBP11.25□□□□□ -0.61
LDB3-202ENST00000361373 PAPPA-AS1Q5QFB9 102 aa11.25□□□□□ -0.61
LDB3-202ENST00000361373 PLA2G2CQ5R387 149 aa11.25□□□□□ -0.61
LDB3-202ENST00000361373 PVRIGQ6DKI7 326 aa11.25□□□□□ -0.61
LDB3-202ENST00000361373 HEPN1Q6WQI6 88 aa11.25□□□□□ -0.61
LDB3-202ENST00000361373 WNT10AQ9GZT5 417 aa11.25□□□□□ -0.61
LDB3-202ENST00000361373 HIST1H1AQ02539 215 aaPredicted RBP11.25□□□□□ -0.61
LDB3-202ENST00000361373 OR8A1Q8NGG7 326 aa11.25□□□□□ -0.61
LDB3-202ENST00000361373 RNF5Q99942 180 aa11.25□□□□□ -0.61
LDB3-202ENST00000361373 PARLQ9H300 379 aa11.25□□□□□ -0.61
LDB3-202ENST00000361373 UBE2L6O14933 153 aa11.24□□□□□ -0.61
LDB3-202ENST00000361373 AMY1AP04745 511 aa11.24□□□□□ -0.61
LDB3-202ENST00000361373 COLCA1Q6ZS62 124 aa11.24□□□□□ -0.61
LDB3-202ENST00000361373 PAQR4Q8N4S7 273 aaPredicted RBP11.24□□□□□ -0.61
LDB3-202ENST00000361373 KIF26BQ2KJY2 2108 aa11.24□□□□□ -0.61
LDB3-202ENST00000361373 FOXG1P55316 489 aaPredicted RBP11.24□□□□□ -0.61
LDB3-202ENST00000361373 FOXL2NBQ6ZUU3 175 aa11.24□□□□□ -0.61
LDB3-202ENST00000361373 IFT22Q9H7X7 185 aa11.24□□□□□ -0.61
LDB3-202ENST00000361373 A0A0G2JNJ9 132 aa11.24□□□□□ -0.61
LDB3-202ENST00000361373 PPP1R17O96001 155 aa11.24□□□□□ -0.61
LDB3-202ENST00000361373 GPR183P32249 361 aa11.24□□□□□ -0.61
LDB3-202ENST00000361373 HERPUD1Q15011 391 aa11.24□□□□□ -0.61
LDB3-202ENST00000361373 C19orf54Q5BKX5 351 aa11.24□□□□□ -0.61
LDB3-202ENST00000361373 NCMAPQ5T1S8 102 aa11.24□□□□□ -0.61
LDB3-202ENST00000361373 MINOS1Q5TGZ0 78 aa11.24□□□□□ -0.61
LDB3-202ENST00000361373 FAM166AQ6J272 317 aa11.24□□□□□ -0.61
LDB3-202ENST00000361373 NR2C2APQ86WQ0 139 aa11.24□□□□□ -0.61
LDB3-202ENST00000361373 Q9UFV3 132 aa11.24□□□□□ -0.61
LDB3-202ENST00000361373 MINOS1-NBL1R4GNA1 71 aa11.24□□□□□ -0.61
LDB3-202ENST00000361373 RRHO14718 337 aa11.24□□□□□ -0.61
LDB3-202ENST00000361373 IGFL3Q6UXB1 125 aa11.24□□□□□ -0.61
LDB3-202ENST00000361373 IGHV3OR16-12A0A075B7B8 117 aa11.23□□□□□ -0.61
LDB3-202ENST00000361373 ICAM4Q14773 271 aa11.23□□□□□ -0.61
LDB3-202ENST00000361373 C18orf12Q96KH6 178 aa11.23□□□□□ -0.61
LDB3-202ENST00000361373 HEATR5BQ9P2D3 2071 aa11.23□□□□□ -0.61
LDB3-202ENST00000361373 IGHV3-48P01763 117 aa11.23□□□□□ -0.61
LDB3-202ENST00000361373 DUTP33316 252 aaKnown RBP11.23□□□□□ -0.61
LDB3-202ENST00000361373 SRSF9Q13242 221 aaKnown RBP eCLIP11.23□□□□□ -0.61
LDB3-202ENST00000361373 PUSL1Q8N0Z8 303 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms