RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 ODAMA1E959 279 aa13.4□□□□□ -0.26
IFT140-201ENST00000361339 CRYABP02511 175 aaKnown RBP13.4□□□□□ -0.26
IFT140-201ENST00000361339 COMPP49747 757 aaPredicted RBP13.4□□□□□ -0.26
IFT140-201ENST00000361339 ZNF83P51522 516 aa13.4□□□□□ -0.26
IFT140-201ENST00000361339 TMEM144Q7Z5S9 345 aa13.4□□□□□ -0.26
IFT140-201ENST00000361339 LYG1Q8N1E2 194 aa13.4□□□□□ -0.26
IFT140-201ENST00000361339 LRRC29Q8WV35 223 aa13.4□□□□□ -0.26
IFT140-201ENST00000361339 LSM10Q969L4 123 aaKnown RBP13.4□□□□□ -0.26
IFT140-201ENST00000361339 NPCDR1Q9BY65 106 aa13.4□□□□□ -0.26
IFT140-201ENST00000361339 KCNIP1Q9NZI2 227 aa13.4□□□□□ -0.26
IFT140-201ENST00000361339 C22orf34Q6ZV56 151 aa13.39□□□□□ -0.27
IFT140-201ENST00000361339 LEAP2Q969E1 77 aa13.39□□□□□ -0.27
IFT140-201ENST00000361339 UHRF2Q96PU4 802 aa13.39□□□□□ -0.27
IFT140-201ENST00000361339 RANP62826 216 aaKnown RBP13.39□□□□□ -0.27
IFT140-201ENST00000361339 PAFAH1B2P68402 229 aa13.39□□□□□ -0.27
IFT140-201ENST00000361339 DUX4L9Q6RFH8 374 aaPredicted RBP13.39□□□□□ -0.27
IFT140-201ENST00000361339 VKORC1L1Q8N0U8 176 aa13.39□□□□□ -0.27
IFT140-201ENST00000361339 ZNF645Q8N7E2 425 aa13.39□□□□□ -0.27
IFT140-201ENST00000361339 PTPRZ1P23471 2315 aaPredicted RBP13.39□□□□□ -0.27
IFT140-201ENST00000361339 PROP1O75360 226 aa13.38□□□□□ -0.27
IFT140-201ENST00000361339 OR8I2Q8N0Y5 310 aa13.38□□□□□ -0.27
IFT140-201ENST00000361339 RCHY1Q96PM5 261 aa13.38□□□□□ -0.27
IFT140-201ENST00000361339 GNB4Q9HAV0 340 aa13.38□□□□□ -0.27
IFT140-201ENST00000361339 ZNF586Q9NXT0 402 aa13.38□□□□□ -0.27
IFT140-201ENST00000361339 NAT8BQ9UHF3 227 aa13.38□□□□□ -0.27
IFT140-201ENST00000361339 HYPMO75409 117 aa13.38□□□□□ -0.27
IFT140-201ENST00000361339 VENTXO95231 258 aa13.38□□□□□ -0.27
IFT140-201ENST00000361339 ZNRF1Q8ND25 227 aa13.38□□□□□ -0.27
IFT140-201ENST00000361339 ALKBH7Q9BT30 221 aaPredicted RBP13.38□□□□□ -0.27
IFT140-201ENST00000361339 CXXC4Q9H2H0 198 aa13.38□□□□□ -0.27
IFT140-201ENST00000361339 NRN1Q9NPD7 142 aa13.38□□□□□ -0.27
IFT140-201ENST00000361339 ZNF318Q5VUA4 2279 aa13.38□□□□□ -0.27
IFT140-201ENST00000361339 HTD2P86397 168 aa13.38□□□□□ -0.27
IFT140-201ENST00000361339 ST6GALNAC6Q969X2 333 aa13.38□□□□□ -0.27
IFT140-201ENST00000361339 TMEM147Q9BVK8 224 aa13.38□□□□□ -0.27
IFT140-201ENST00000361339 ZNF71Q9NQZ8 489 aaPredicted RBP13.38□□□□□ -0.27
IFT140-201ENST00000361339 EIF4EBP1Q13541 118 aaPredicted RBP13.37□□□□□ -0.27
IFT140-201ENST00000361339 FXYD3Q14802 87 aa13.37□□□□□ -0.27
IFT140-201ENST00000361339 SAPCD1Q5SSQ6 148 aa13.37□□□□□ -0.27
IFT140-201ENST00000361339 OR4C5Q8NGB2 326 aa13.37□□□□□ -0.27
IFT140-201ENST00000361339 ACACAQ13085 2346 aa13.37□□□□□ -0.27
IFT140-201ENST00000361339 TRAV17A0A0B4J275 112 aa13.37□□□□□ -0.27
IFT140-201ENST00000361339 PRR33A8MZF0 331 aa13.37□□□□□ -0.27
IFT140-201ENST00000361339 CLDN14O95500 239 aa13.37□□□□□ -0.27
IFT140-201ENST00000361339 VPS25Q9BRG1 176 aa13.37□□□□□ -0.27
IFT140-201ENST00000361339 ARL14EPLP0DKL9 152 aa13.36□□□□□ -0.27
IFT140-201ENST00000361339 IGKV1D-17A0A075B6S4 117 aa13.36□□□□□ -0.27
IFT140-201ENST00000361339 OOEPA6NGQ2 149 aa13.36□□□□□ -0.27
IFT140-201ENST00000361339 FOXL1Q12952 345 aa13.36□□□□□ -0.27
IFT140-201ENST00000361339 VAMP3Q15836 100 aa13.36□□□□□ -0.27
IFT140-201ENST00000361339 TMEM14EPQ6UXP3 125 aa13.36□□□□□ -0.27
IFT140-201ENST00000361339 C1orf229Q6ZS94 237 aaPredicted RBP13.36□□□□□ -0.27
IFT140-201ENST00000361339 J3QW42 95 aa13.35□□□□□ -0.27
IFT140-201ENST00000361339 M0R1B8 84 aa13.35□□□□□ -0.27
IFT140-201ENST00000361339 ZNF253O75346 499 aa13.35□□□□□ -0.27
IFT140-201ENST00000361339 CGAP01215 116 aa13.35□□□□□ -0.27
IFT140-201ENST00000361339 SELENOTP62341 195 aa13.35□□□□□ -0.27
IFT140-201ENST00000361339 RPL39P5Q59GN2 51 aa13.35□□□□□ -0.27
IFT140-201ENST00000361339 SLC35E4Q6ICL7 350 aa13.35□□□□□ -0.27
IFT140-201ENST00000361339 MRPL54Q6P161 138 aaKnown RBP13.35□□□□□ -0.27
IFT140-201ENST00000361339 IGFL2Q6UWQ7 119 aa13.35□□□□□ -0.27
IFT140-201ENST00000361339 SSMEM1Q8WWF3 244 aa13.35□□□□□ -0.27
IFT140-201ENST00000361339 NINJ1Q92982 152 aa13.35□□□□□ -0.27
IFT140-201ENST00000361339 NKX6-3A6NJ46 265 aa13.35□□□□□ -0.27
IFT140-201ENST00000361339 TM4SF5O14894 197 aa13.35□□□□□ -0.27
IFT140-201ENST00000361339 GPX1P07203 203 aa13.35□□□□□ -0.27
IFT140-201ENST00000361339 TIMP3P35625 211 aa13.35□□□□□ -0.27
IFT140-201ENST00000361339 ZNF474Q6S9Z5 364 aaPredicted RBP13.35□□□□□ -0.27
IFT140-201ENST00000361339 SARAFQ96BY9 339 aa13.35□□□□□ -0.27
IFT140-201ENST00000361339 QTRT1Q9BXR0 403 aaKnown RBP13.35□□□□□ -0.27
IFT140-201ENST00000361339 PLSCR4Q9NRQ2 329 aa13.35□□□□□ -0.27
IFT140-201ENST00000361339 UQCR10Q9UDW1 63 aa13.35□□□□□ -0.27
IFT140-201ENST00000361339 PKDREJQ9NTG1 2253 aa13.35□□□□□ -0.27
IFT140-201ENST00000361339 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.35□□□□□ -0.27
IFT140-201ENST00000361339 SPRY3O43610 288 aa13.35□□□□□ -0.27
IFT140-201ENST00000361339 P0C879 139 aa13.35□□□□□ -0.27
IFT140-201ENST00000361339 PRDX2P32119 198 aa13.35□□□□□ -0.27
IFT140-201ENST00000361339 ATP6V1FQ16864 119 aa13.35□□□□□ -0.27
IFT140-201ENST00000361339 ZNF718Q3SXZ3 478 aa13.35□□□□□ -0.27
IFT140-201ENST00000361339 BHLHA15Q7RTS1 189 aaPredicted RBP13.35□□□□□ -0.27
IFT140-201ENST00000361339 C1orf174Q8IYL3 243 aa13.35□□□□□ -0.27
IFT140-201ENST00000361339 OR4B1Q8NGF8 309 aa13.35□□□□□ -0.27
IFT140-201ENST00000361339 PROCRQ9UNN8 238 aa13.35□□□□□ -0.27
IFT140-201ENST00000361339 LRRC30A6NM36 301 aa13.34□□□□□ -0.27
IFT140-201ENST00000361339 IGLV1-44P01699 117 aa13.34□□□□□ -0.27
IFT140-201ENST00000361339 IGLC2P0DOY2 106 aa13.34□□□□□ -0.27
IFT140-201ENST00000361339 IGLC3P0DOY3 106 aa13.34□□□□□ -0.27
IFT140-201ENST00000361339 ZNF134P52741 427 aa13.34□□□□□ -0.27
IFT140-201ENST00000361339 Q8TCH9 128 aa13.34□□□□□ -0.27
IFT140-201ENST00000361339 PARD6GQ9BYG4 376 aaPredicted RBP13.34□□□□□ -0.27
IFT140-201ENST00000361339 C15orf65H3BRN8 121 aa13.34□□□□□ -0.27
IFT140-201ENST00000361339 OR9G9P0C7N8 305 aa13.34□□□□□ -0.27
IFT140-201ENST00000361339 RELBQ01201 579 aa13.34□□□□□ -0.27
IFT140-201ENST00000361339 MOGAT3Q86VF5 341 aa13.34□□□□□ -0.27
IFT140-201ENST00000361339 RNF2Q99496 336 aa13.34□□□□□ -0.27
IFT140-201ENST00000361339 HSPB7Q9UBY9 170 aa13.34□□□□□ -0.27
IFT140-201ENST00000361339 DSCAMO60469 2012 aa13.34□□□□□ -0.27
IFT140-201ENST00000361339 K7EN84 100 aa13.33□□□□□ -0.28
IFT140-201ENST00000361339 PTPRBP23467 1997 aa13.33□□□□□ -0.28
IFT140-201ENST00000361339 MIC13Q5XKP0 118 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms