RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 CCL3L1P16619 93 aa18.49■□□□□ 0.55
LDB1-201ENST00000361198 GALR1P47211 349 aa18.49■□□□□ 0.55
LDB1-201ENST00000361198 OR4A47Q6IF82 309 aa18.49■□□□□ 0.55
LDB1-201ENST00000361198 PRDM13Q9H4Q3 707 aa18.49■□□□□ 0.55
LDB1-201ENST00000361198 HEYLQ9NQ87 328 aaPredicted RBP18.49■□□□□ 0.55
LDB1-201ENST00000361198 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.49■□□□□ 0.55
LDB1-201ENST00000361198 MEF2CQ06413 473 aaPredicted RBP18.49■□□□□ 0.55
LDB1-201ENST00000361198 ADTRPQ96IZ2 230 aa18.49■□□□□ 0.55
LDB1-201ENST00000361198 OR5B12Q96R08 314 aa18.49■□□□□ 0.55
LDB1-201ENST00000361198 GAL3ST2Q9H3Q3 398 aa18.49■□□□□ 0.55
LDB1-201ENST00000361198 TRBV23-1A0A0A0MS06 115 aa18.48■□□□□ 0.55
LDB1-201ENST00000361198 RRHO14718 337 aa18.48■□□□□ 0.55
LDB1-201ENST00000361198 TNFRSF13BO14836 293 aaPredicted RBP18.48■□□□□ 0.55
LDB1-201ENST00000361198 FABP4P15090 132 aa18.48■□□□□ 0.55
LDB1-201ENST00000361198 TMEM200BQ69YZ2 307 aa18.48■□□□□ 0.55
LDB1-201ENST00000361198 LINC01560Q8TB33 94 aa18.48■□□□□ 0.55
LDB1-201ENST00000361198 TCF19Q9Y242 345 aa18.48■□□□□ 0.55
LDB1-201ENST00000361198 TNCP24821 2201 aa18.48■□□□□ 0.55
LDB1-201ENST00000361198 C15orf61A6NNL5 157 aa18.48■□□□□ 0.55
LDB1-201ENST00000361198 HRASP01112 189 aa18.48■□□□□ 0.55
LDB1-201ENST00000361198 CT45A6P0DMU7 189 aa18.48■□□□□ 0.55
LDB1-201ENST00000361198 CT45A5P0DMU8 189 aa18.48■□□□□ 0.55
LDB1-201ENST00000361198 CT45A7P0DMV0 189 aa18.48■□□□□ 0.55
LDB1-201ENST00000361198 NPPCP23582 126 aa18.48■□□□□ 0.55
LDB1-201ENST00000361198 CA7P43166 264 aa18.48■□□□□ 0.55
LDB1-201ENST00000361198 CASP6P55212 293 aa18.48■□□□□ 0.55
LDB1-201ENST00000361198 COA6Q5JTJ3 125 aaKnown RBP18.48■□□□□ 0.55
LDB1-201ENST00000361198 HIST1H2BLQ99880 126 aa18.48■□□□□ 0.55
LDB1-201ENST00000361198 MS4A5Q9H3V2 200 aa18.48■□□□□ 0.55
LDB1-201ENST00000361198 ANKHD1Q8IWZ3 2542 aaKnown RBP18.47■□□□□ 0.55
LDB1-201ENST00000361198 C11orf94C9JXX5 98 aa18.47■□□□□ 0.55
LDB1-201ENST00000361198 MPDU1O75352 247 aa18.47■□□□□ 0.55
LDB1-201ENST00000361198 PLAUP00749 431 aa18.47■□□□□ 0.55
LDB1-201ENST00000361198 DEFA4P12838 97 aa18.47■□□□□ 0.55
LDB1-201ENST00000361198 TMEM183AQ8IXX5 376 aa18.47■□□□□ 0.55
LDB1-201ENST00000361198 ABHD12Q8N2K0 398 aa18.47■□□□□ 0.55
LDB1-201ENST00000361198 ZNF714Q96N38 554 aa18.47■□□□□ 0.55
LDB1-201ENST00000361198 PFDN5Q99471 154 aa18.47■□□□□ 0.55
LDB1-201ENST00000361198 FAM90A27PA6NNH2 459 aa18.47■□□□□ 0.55
LDB1-201ENST00000361198 GRNP28799 593 aaKnown RBP18.47■□□□□ 0.55
LDB1-201ENST00000361198 APOBEC3AP31941 199 aaPredicted RBP18.47■□□□□ 0.55
LDB1-201ENST00000361198 RPP30P78346 268 aaKnown RBP18.47■□□□□ 0.55
LDB1-201ENST00000361198 TMEM170AQ8WVE7 144 aa18.47■□□□□ 0.55
LDB1-201ENST00000361198 H1FXQ92522 213 aaKnown RBP18.47■□□□□ 0.55
LDB1-201ENST00000361198 ZMAT5Q9UDW3 170 aaKnown RBP18.47■□□□□ 0.55
LDB1-201ENST00000361198 TPRP12270 2363 aaKnown RBP18.46■□□□□ 0.55
LDB1-201ENST00000361198 PPP5D1E7EU14 171 aa18.46■□□□□ 0.55
LDB1-201ENST00000361198 GATCO43716 136 aaKnown RBP18.46■□□□□ 0.55
LDB1-201ENST00000361198 IGKV1-16P04430 117 aa18.46■□□□□ 0.55
LDB1-201ENST00000361198 CD3EP07766 207 aa18.46■□□□□ 0.55
LDB1-201ENST00000361198 NECAP1Q8NC96 275 aa18.46■□□□□ 0.55
LDB1-201ENST00000361198 CTSZQ9UBR2 303 aa18.46■□□□□ 0.55
LDB1-201ENST00000361198 GGCTO75223 188 aaKnown RBP18.46■□□□□ 0.54
LDB1-201ENST00000361198 FAM3BP58499 235 aaPredicted RBP18.46■□□□□ 0.54
LDB1-201ENST00000361198 PACRGQ96M98 296 aaPredicted RBP18.46■□□□□ 0.54
LDB1-201ENST00000361198 TMEM14BQ9NUH8 114 aa18.46■□□□□ 0.54
LDB1-201ENST00000361198 ABCA4P78363 2273 aa18.45■□□□□ 0.54
LDB1-201ENST00000361198 PRSS46E5RG02 174 aa18.45■□□□□ 0.54
LDB1-201ENST00000361198 PDE6DO43924 150 aa18.45■□□□□ 0.54
LDB1-201ENST00000361198 ELOVL1Q9BW60 279 aa18.45■□□□□ 0.54
LDB1-201ENST00000361198 FOXA2Q9Y261 457 aaPredicted RBP18.45■□□□□ 0.54
LDB1-201ENST00000361198 CCL21O00585 134 aa18.44■□□□□ 0.54
LDB1-201ENST00000361198 NDUFB3O43676 98 aa18.44■□□□□ 0.54
LDB1-201ENST00000361198 TYMSP04818 313 aa18.44■□□□□ 0.54
LDB1-201ENST00000361198 SRP14P37108 136 aaKnown RBP18.44■□□□□ 0.54
LDB1-201ENST00000361198 OPRK1P41145 380 aa18.44■□□□□ 0.54
LDB1-201ENST00000361198 KLRB1Q12918 225 aa18.44■□□□□ 0.54
LDB1-201ENST00000361198 POU2AF1Q16633 256 aa18.44■□□□□ 0.54
LDB1-201ENST00000361198 SLC35D1Q9NTN3 355 aa18.44■□□□□ 0.54
LDB1-201ENST00000361198 RD3LP0DJH9 198 aa18.44■□□□□ 0.54
LDB1-201ENST00000361198 MYOD1P15172 320 aa18.44■□□□□ 0.54
LDB1-201ENST00000361198 EFNB3Q15768 340 aa18.44■□□□□ 0.54
LDB1-201ENST00000361198 LRRC10Q5BKY1 277 aa18.44■□□□□ 0.54
LDB1-201ENST00000361198 GCSAMLQ5JQS6 135 aa18.44■□□□□ 0.54
LDB1-201ENST00000361198 TREML4Q6UXN2 200 aa18.44■□□□□ 0.54
LDB1-201ENST00000361198 PCGF1Q9BSM1 259 aa18.44■□□□□ 0.54
LDB1-201ENST00000361198 SRRM4A7MD48 611 aaKnown RBP18.43■□□□□ 0.54
LDB1-201ENST00000361198 DVL1O14640 695 aa18.43■□□□□ 0.54
LDB1-201ENST00000361198 HSPE1P61604 102 aaKnown RBP18.43■□□□□ 0.54
LDB1-201ENST00000361198 RNASEH2CQ8TDP1 164 aaKnown RBP18.43■□□□□ 0.54
LDB1-201ENST00000361198 B9A039 149 aa18.43■□□□□ 0.54
LDB1-201ENST00000361198 C9orf152Q5JTZ5 239 aa18.43■□□□□ 0.54
LDB1-201ENST00000361198 ZNF833PQ6ZTB9 187 aa18.43■□□□□ 0.54
LDB1-201ENST00000361198 OR2T10Q8NGZ9 312 aa18.43■□□□□ 0.54
LDB1-201ENST00000361198 KCNIP2Q9NS61 270 aa18.43■□□□□ 0.54
LDB1-201ENST00000361198 IGHV1-69-2A0A0G2JMI3 117 aa18.42■□□□□ 0.54
LDB1-201ENST00000361198 CD99P14209 185 aa18.42■□□□□ 0.54
LDB1-201ENST00000361198 CHRNB4P30926 498 aa18.42■□□□□ 0.54
LDB1-201ENST00000361198 GNB1P62873 340 aa18.42■□□□□ 0.54
LDB1-201ENST00000361198 RTL8BQ17RB0 113 aa18.42■□□□□ 0.54
LDB1-201ENST00000361198 FBXL19-AS1Q494R0 122 aa18.42■□□□□ 0.54
LDB1-201ENST00000361198 LINC01551Q86U37 167 aa18.42■□□□□ 0.54
LDB1-201ENST00000361198 ST6GALNAC3Q8NDV1 305 aa18.42■□□□□ 0.54
LDB1-201ENST00000361198 OR1P1Q8NH06 330 aa18.42■□□□□ 0.54
LDB1-201ENST00000361198 A0A1W2PPV4 95 aa18.42■□□□□ 0.54
LDB1-201ENST00000361198 SIAH2O43255 324 aa18.42■□□□□ 0.54
LDB1-201ENST00000361198 IL6RP08887 468 aaPredicted RBP18.42■□□□□ 0.54
LDB1-201ENST00000361198 PDLIM4P50479 330 aa18.42■□□□□ 0.54
LDB1-201ENST00000361198 ACY3Q96HD9 319 aa18.42■□□□□ 0.54
LDB1-201ENST00000361198 A0A1W2PPQ1 181 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms