RNA–Protein interactions for RNA: ENST00000360982.2

NCKAP1-201, Transcript of NCK associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene NCKAP1, Length 4,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-201ENST00000360982 REG1AP05451 166 aa17.35■□□□□ 0.37
NCKAP1-201ENST00000360982 ZNF506Q5JVG8 444 aa17.35■□□□□ 0.37
NCKAP1-201ENST00000360982 FBXL15Q9H469 300 aa17.35■□□□□ 0.37
NCKAP1-201ENST00000360982 PHLDA3Q9Y5J5 127 aa17.35■□□□□ 0.37
NCKAP1-201ENST00000360982 A0A087WWC5 75 aa17.35■□□□□ 0.37
NCKAP1-201ENST00000360982 IL4P05112 153 aa17.35■□□□□ 0.37
NCKAP1-201ENST00000360982 DSCR9P59020 149 aa17.35■□□□□ 0.37
NCKAP1-201ENST00000360982 ZNF837Q96EG3 531 aaPredicted RBP17.35■□□□□ 0.37
NCKAP1-201ENST00000360982 AP5S1Q9NUS5 200 aa17.35■□□□□ 0.37
NCKAP1-201ENST00000360982 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.34■□□□□ 0.37
NCKAP1-201ENST00000360982 TWIST1Q15672 202 aa17.34■□□□□ 0.37
NCKAP1-201ENST00000360982 GPHA2Q96T91 129 aa17.34■□□□□ 0.37
NCKAP1-201ENST00000360982 HIST1H2BKO60814 126 aa17.34■□□□□ 0.37
NCKAP1-201ENST00000360982 IGKV1D-33P01593 117 aa17.34■□□□□ 0.37
NCKAP1-201ENST00000360982 IGKV1-33P01594 117 aa17.34■□□□□ 0.37
NCKAP1-201ENST00000360982 HIST1H2BJP06899 126 aa17.34■□□□□ 0.37
NCKAP1-201ENST00000360982 GPX1P07203 203 aa17.34■□□□□ 0.37
NCKAP1-201ENST00000360982 HIST1H2BOP23527 126 aa17.34■□□□□ 0.37
NCKAP1-201ENST00000360982 HIST1H2BBP33778 126 aa17.34■□□□□ 0.37
NCKAP1-201ENST00000360982 HIST1H2BDP58876 126 aa17.34■□□□□ 0.37
NCKAP1-201ENST00000360982 HIST1H2BCP62807 126 aa17.34■□□□□ 0.37
NCKAP1-201ENST00000360982 HIST2H2BEQ16778 126 aa17.34■□□□□ 0.37
NCKAP1-201ENST00000360982 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.34■□□□□ 0.37
NCKAP1-201ENST00000360982 BIVMQ86UB2 503 aa17.34■□□□□ 0.37
NCKAP1-201ENST00000360982 HIST1H2BHQ93079 126 aa17.34■□□□□ 0.37
NCKAP1-201ENST00000360982 HIST1H2BNQ99877 126 aa17.34■□□□□ 0.37
NCKAP1-201ENST00000360982 HIST1H2BMQ99879 126 aa17.34■□□□□ 0.37
NCKAP1-201ENST00000360982 CDC42EP3Q9UKI2 254 aa17.34■□□□□ 0.37
NCKAP1-201ENST00000360982 THBDP07204 575 aa17.33■□□□□ 0.37
NCKAP1-201ENST00000360982 RPL39P5Q59GN2 51 aa17.33■□□□□ 0.37
NCKAP1-201ENST00000360982 C19orf54Q5BKX5 351 aa17.33■□□□□ 0.37
NCKAP1-201ENST00000360982 LY6G6FQ5SQ64 297 aa17.33■□□□□ 0.37
NCKAP1-201ENST00000360982 CGB1A6NKQ9 187 aa17.33■□□□□ 0.37
NCKAP1-201ENST00000360982 NPIPB7O75200 414 aa17.33■□□□□ 0.36
NCKAP1-201ENST00000360982 MOSP00540 346 aa17.33■□□□□ 0.36
NCKAP1-201ENST00000360982 NEUROG3Q9Y4Z2 214 aa17.33■□□□□ 0.36
NCKAP1-201ENST00000360982 CELA3BP08861 270 aa17.33■□□□□ 0.36
NCKAP1-201ENST00000360982 SRP19P09132 144 aaKnown RBP17.33■□□□□ 0.36
NCKAP1-201ENST00000360982 DLX6P56179 175 aa17.33■□□□□ 0.36
NCKAP1-201ENST00000360982 TMEM187Q14656 261 aa17.33■□□□□ 0.36
NCKAP1-201ENST00000360982 VKORC1L1Q8N0U8 176 aa17.33■□□□□ 0.36
NCKAP1-201ENST00000360982 UQCRFS1P47985 274 aa17.32■□□□□ 0.36
NCKAP1-201ENST00000360982 IBA57Q5T440 356 aaKnown RBP17.32■□□□□ 0.36
NCKAP1-201ENST00000360982 PPP1R27Q86WC6 154 aa17.32■□□□□ 0.36
NCKAP1-201ENST00000360982 OR13A1Q8NGR1 328 aa17.32■□□□□ 0.36
NCKAP1-201ENST00000360982 WBP1Q96G27 269 aa17.32■□□□□ 0.36
NCKAP1-201ENST00000360982 A0A1B0GTI1 187 aa17.32■□□□□ 0.36
NCKAP1-201ENST00000360982 RALGAPA2Q2PPJ7 1873 aa17.32■□□□□ 0.36
NCKAP1-201ENST00000360982 THADAQ6YHU6 1953 aa17.32■□□□□ 0.36
NCKAP1-201ENST00000360982 CREBBPQ92793 2442 aa17.32■□□□□ 0.36
NCKAP1-201ENST00000360982 JOSD1Q15040 202 aaPredicted RBP17.32■□□□□ 0.36
NCKAP1-201ENST00000360982 HEATR5BQ9P2D3 2071 aa17.32■□□□□ 0.36
NCKAP1-201ENST00000360982 IGKV3D-15A0A087WSY6 115 aa17.32■□□□□ 0.36
NCKAP1-201ENST00000360982 UBE2L6O14933 153 aa17.32■□□□□ 0.36
NCKAP1-201ENST00000360982 NABP2Q9BQ15 211 aa17.32■□□□□ 0.36
NCKAP1-201ENST00000360982 LTBP1Q14766 1721 aa17.32■□□□□ 0.36
NCKAP1-201ENST00000360982 CX3CL1P78423 397 aa17.31■□□□□ 0.36
NCKAP1-201ENST00000360982 SLC25A34Q6PIV7 304 aa17.31■□□□□ 0.36
NCKAP1-201ENST00000360982 C1QL2Q7Z5L3 287 aa17.31■□□□□ 0.36
NCKAP1-201ENST00000360982 MIEN1Q9BRT3 115 aa17.31■□□□□ 0.36
NCKAP1-201ENST00000360982 ALKBH7Q9BT30 221 aaPredicted RBP17.31■□□□□ 0.36
NCKAP1-201ENST00000360982 SPRR3Q9UBC9 169 aa17.31■□□□□ 0.36
NCKAP1-201ENST00000360982 METRNQ9UJH8 293 aa17.31■□□□□ 0.36
NCKAP1-201ENST00000360982 FBXL7Q9UJT9 491 aa17.31■□□□□ 0.36
NCKAP1-201ENST00000360982 PATJQ8NI35 1801 aa17.31■□□□□ 0.36
NCKAP1-201ENST00000360982 CA2P00918 260 aa17.31■□□□□ 0.36
NCKAP1-201ENST00000360982 PLSCR2Q9NRY7 297 aa17.31■□□□□ 0.36
NCKAP1-201ENST00000360982 C21orf62Q9NYP8 219 aa17.31■□□□□ 0.36
NCKAP1-201ENST00000360982 MYO7BQ6PIF6 2116 aa17.31■□□□□ 0.36
NCKAP1-201ENST00000360982 FAM53AQ6NSI3 398 aaPredicted RBP17.3■□□□□ 0.36
NCKAP1-201ENST00000360982 IGHV3-35A0A0C4DH35 117 aa17.3■□□□□ 0.36
NCKAP1-201ENST00000360982 ATOH7Q8N100 152 aa17.3■□□□□ 0.36
NCKAP1-201ENST00000360982 MSRB2Q9Y3D2 182 aa17.3■□□□□ 0.36
NCKAP1-201ENST00000360982 PSME4Q14997 1843 aa17.3■□□□□ 0.36
NCKAP1-201ENST00000360982 FABP2P12104 132 aa17.3■□□□□ 0.36
NCKAP1-201ENST00000360982 ARPC1AQ92747 370 aa17.3■□□□□ 0.36
NCKAP1-201ENST00000360982 SPSB4Q96A44 273 aa17.3■□□□□ 0.36
NCKAP1-201ENST00000360982 PRSS22Q9GZN4 317 aa17.3■□□□□ 0.36
NCKAP1-201ENST00000360982 CA7P43166 264 aa17.3■□□□□ 0.36
NCKAP1-201ENST00000360982 CLDND2Q8NHS1 167 aa17.3■□□□□ 0.36
NCKAP1-201ENST00000360982 F8VVB4 439 aa17.29■□□□□ 0.36
NCKAP1-201ENST00000360982 F8VWA3 439 aa17.29■□□□□ 0.36
NCKAP1-201ENST00000360982 ANOS1P23352 680 aa17.29■□□□□ 0.36
NCKAP1-201ENST00000360982 PYY3Q5JQD4 70 aa17.29■□□□□ 0.36
NCKAP1-201ENST00000360982 TTC28Q96AY4 2481 aa17.29■□□□□ 0.36
NCKAP1-201ENST00000360982 HEPN1Q6WQI6 88 aa17.29■□□□□ 0.36
NCKAP1-201ENST00000360982 PI4KAP42356 2102 aa17.29■□□□□ 0.36
NCKAP1-201ENST00000360982 STAG3L2P0CL84 134 aa17.29■□□□□ 0.36
NCKAP1-201ENST00000360982 CRXO43186 299 aaPredicted RBP17.29■□□□□ 0.36
NCKAP1-201ENST00000360982 SRSF9Q13242 221 aaKnown RBP eCLIP17.29■□□□□ 0.36
NCKAP1-201ENST00000360982 A0A0G2JMZ2 1700 aa17.29■□□□□ 0.36
NCKAP1-201ENST00000360982 LRRC37A2A6NM11 1700 aa17.29■□□□□ 0.36
NCKAP1-201ENST00000360982 HLA-DQA1P01909 254 aa17.28■□□□□ 0.36
NCKAP1-201ENST00000360982 CKS2P33552 79 aa17.28■□□□□ 0.36
NCKAP1-201ENST00000360982 SAMD13Q5VXD3 122 aa17.28■□□□□ 0.36
NCKAP1-201ENST00000360982 PEAR1Q5VY43 1037 aaPredicted RBP17.28■□□□□ 0.36
NCKAP1-201ENST00000360982 C20orf204Q6ZNR8 217 aa17.28■□□□□ 0.36
NCKAP1-201ENST00000360982 GTF3AQ92664 365 aaKnown RBP17.28■□□□□ 0.36
NCKAP1-201ENST00000360982 RTN4RQ9BZR6 473 aa17.28■□□□□ 0.36
NCKAP1-201ENST00000360982 IFI27L2Q9H2X8 130 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms