RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 DIRC2Q96SL1 478 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 TMEM106BQ9NUM4 274 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 NCOR2Q9Y618 2525 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 ANKRD11Q6UB99 2663 aaPredicted RBP9.23□□□□□ -0.93
SSU72-202ENST00000359060 A0A0G2JNJ9 132 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 C15orf61A6NNL5 157 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 CD81P60033 236 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 UBE2G1P62253 170 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 MSMPQ1L6U9 139 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 C11orf1Q9H5F2 150 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 Q9UFV3 132 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 CHD3Q12873 2000 aaKnown RBP9.23□□□□□ -0.93
SSU72-202ENST00000359060 FAM157AC9JC47 383 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 LYNX1G3V0Z9 82 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 C15orf65H3BRN8 121 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 RBFOX2O43251 390 aaKnown RBP eCLIP9.23□□□□□ -0.93
SSU72-202ENST00000359060 LYNX1P0DP58 116 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 SLC35B1P78383 322 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 IGFL2Q6UWQ7 119 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 SEM1Q6ZVN7 128 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 ODF3L1Q8IXM7 274 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 ZNF383Q8NA42 475 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 OR4X1Q8NH49 305 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 NABP2Q9BQ15 211 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 TMEM167BQ9NRX6 74 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 PITPNC1Q9UKF7 332 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 PLXNB1O43157 2135 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 SCO2A0A1W2PP80 73 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 HELTA6NFD8 242 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 HIST1H2BKO60814 126 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 HIST1H2BJP06899 126 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 HIST1H2BOP23527 126 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 GCHFRP30047 84 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 HIST1H2BBP33778 126 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 HIST1H2BDP58876 126 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 HIST1H2BCP62807 126 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 HIST2H2BEQ16778 126 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.23□□□□□ -0.93
SSU72-202ENST00000359060 HIST1H2BHQ93079 126 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 HIST1H2BNQ99877 126 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 HIST1H2BMQ99879 126 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 SAA1P0DJI8 122 aaPredicted RBP9.22□□□□□ -0.93
SSU72-202ENST00000359060 RELBQ01201 579 aa9.22□□□□□ -0.93
SSU72-202ENST00000359060 C5orf30Q96GV9 206 aa9.22□□□□□ -0.93
SSU72-202ENST00000359060 WFIKKN1Q96NZ8 548 aa9.22□□□□□ -0.93
SSU72-202ENST00000359060 ELOA3CA0A087WX78 387 aaPredicted RBP9.22□□□□□ -0.93
SSU72-202ENST00000359060 DPRXA6NFQ7 191 aa9.22□□□□□ -0.93
SSU72-202ENST00000359060 CGAP01215 116 aa9.22□□□□□ -0.93
SSU72-202ENST00000359060 LINC00869P0C866 280 aa9.22□□□□□ -0.93
SSU72-202ENST00000359060 LGALS4P56470 323 aa9.22□□□□□ -0.93
SSU72-202ENST00000359060 SSTP61278 116 aa9.22□□□□□ -0.93
SSU72-202ENST00000359060 GFI1BQ5VTD9 330 aa9.22□□□□□ -0.93
SSU72-202ENST00000359060 OR10W1Q8NGF6 305 aa9.22□□□□□ -0.93
SSU72-202ENST00000359060 OR1B1Q8NGR6 318 aa9.22□□□□□ -0.93
SSU72-202ENST00000359060 DAZAP1Q96EP5 407 aaKnown RBP9.22□□□□□ -0.93
SSU72-202ENST00000359060 AGMATQ9BSE5 352 aa9.22□□□□□ -0.93
SSU72-202ENST00000359060 RPUSD1Q9UJJ7 312 aaKnown RBP9.22□□□□□ -0.93
SSU72-202ENST00000359060 ZNF835Q9Y2P0 537 aa9.22□□□□□ -0.93
SSU72-202ENST00000359060 A0A1W2PN81 502 aa9.22□□□□□ -0.93
SSU72-202ENST00000359060 FCN1O00602 326 aa9.22□□□□□ -0.93
SSU72-202ENST00000359060 UBE2CO00762 179 aa9.22□□□□□ -0.93
SSU72-202ENST00000359060 GFRA3O60609 400 aa9.22□□□□□ -0.93
SSU72-202ENST00000359060 CRYBB3P26998 211 aa9.22□□□□□ -0.93
SSU72-202ENST00000359060 DERL1Q9BUN8 251 aa9.22□□□□□ -0.93
SSU72-202ENST00000359060 GGTLC1Q9BX51 225 aa9.22□□□□□ -0.93
SSU72-202ENST00000359060 LINC00312Q9Y6C7 94 aa9.22□□□□□ -0.93
SSU72-202ENST00000359060 TRBV23-1A0A0A0MS06 115 aa9.21□□□□□ -0.93
SSU72-202ENST00000359060 IGKV1-16P04430 117 aa9.21□□□□□ -0.93
SSU72-202ENST00000359060 CNN1P51911 297 aaKnown RBP9.21□□□□□ -0.93
SSU72-202ENST00000359060 PRRX1P54821 245 aa9.21□□□□□ -0.93
SSU72-202ENST00000359060 SSX2Q16385 188 aa9.21□□□□□ -0.93
SSU72-202ENST00000359060 PRR30Q53SZ7 412 aaPredicted RBP9.21□□□□□ -0.93
SSU72-202ENST00000359060 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.21□□□□□ -0.93
SSU72-202ENST00000359060 GAFA1Q96PS6 74 aa9.21□□□□□ -0.93
SSU72-202ENST00000359060 GGACTQ9BVM4 153 aa9.21□□□□□ -0.93
SSU72-202ENST00000359060 ELOVL5Q9NYP7 299 aa9.21□□□□□ -0.93
SSU72-202ENST00000359060 MMP23AO75900 390 aa9.21□□□□□ -0.93
SSU72-202ENST00000359060 RBP4P02753 201 aa9.21□□□□□ -0.93
SSU72-202ENST00000359060 C1QTNF9P0C862 333 aa9.21□□□□□ -0.93
SSU72-202ENST00000359060 MIR17HGQ75NE6 70 aa9.21□□□□□ -0.93
SSU72-202ENST00000359060 SPACA3Q8IXA5 215 aa9.21□□□□□ -0.93
SSU72-202ENST00000359060 OR4C13Q8NGP0 309 aa9.21□□□□□ -0.93
SSU72-202ENST00000359060 NPIPB3Q92617 1050 aa9.21□□□□□ -0.93
SSU72-202ENST00000359060 TMEM68Q96MH6 324 aa9.21□□□□□ -0.93
SSU72-202ENST00000359060 NAT8BQ9UHF3 227 aa9.21□□□□□ -0.93
SSU72-202ENST00000359060 IGHV1-69-2A0A0G2JMI3 117 aa9.21□□□□□ -0.94
SSU72-202ENST00000359060 TM4SF5O14894 197 aa9.21□□□□□ -0.94
SSU72-202ENST00000359060 HOXA5P20719 270 aa9.21□□□□□ -0.94
SSU72-202ENST00000359060 RND2P52198 227 aa9.21□□□□□ -0.94
SSU72-202ENST00000359060 C10orf55Q5SWW7 151 aa9.21□□□□□ -0.94
SSU72-202ENST00000359060 SPATA31B1PQ5VZV4 182 aa9.21□□□□□ -0.94
SSU72-202ENST00000359060 ZNF331Q9NQX6 463 aaPredicted RBP9.21□□□□□ -0.94
SSU72-202ENST00000359060 F2RL2O00254 374 aa9.2□□□□□ -0.94
SSU72-202ENST00000359060 CT45A6P0DMU7 189 aa9.2□□□□□ -0.94
SSU72-202ENST00000359060 CT45A5P0DMU8 189 aa9.2□□□□□ -0.94
SSU72-202ENST00000359060 CT45A7P0DMV0 189 aa9.2□□□□□ -0.94
SSU72-202ENST00000359060 ASCL5Q7RTU5 278 aa9.2□□□□□ -0.94
SSU72-202ENST00000359060 CMTM2Q8TAZ6 248 aa9.2□□□□□ -0.94
SSU72-202ENST00000359060 FAM103A1Q9BTL3 118 aaKnown RBP9.2□□□□□ -0.94
SSU72-202ENST00000359060 WASHC3Q9Y3C0 194 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms