RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 CYTL1Q9NRR1 136 aa11.56□□□□□ -0.56
VCP-201ENST00000358901 OR4C46A6NHA9 309 aa11.56□□□□□ -0.56
VCP-201ENST00000358901 CIDEAO60543 219 aa11.56□□□□□ -0.56
VCP-201ENST00000358901 KLF7O75840 302 aaPredicted RBP11.56□□□□□ -0.56
VCP-201ENST00000358901 FOLR2P14207 255 aa11.56□□□□□ -0.56
VCP-201ENST00000358901 FOXG1P55316 489 aaPredicted RBP11.56□□□□□ -0.56
VCP-201ENST00000358901 OR4A47Q6IF82 309 aa11.56□□□□□ -0.56
VCP-201ENST00000358901 DPF1Q92782 380 aa11.56□□□□□ -0.56
VCP-201ENST00000358901 TRAV24A0A0B4J272 114 aa11.55□□□□□ -0.56
VCP-201ENST00000358901 FAM27E3Q08E93 113 aa11.55□□□□□ -0.56
VCP-201ENST00000358901 TCF20Q9UGU0 1960 aaKnown RBP11.55□□□□□ -0.56
VCP-201ENST00000358901 PPIAL4CA0A0B4J2A2 164 aa11.55□□□□□ -0.56
VCP-201ENST00000358901 K7ERU9 68 aa11.55□□□□□ -0.56
VCP-201ENST00000358901 PPIAL4GP0DN37 164 aa11.55□□□□□ -0.56
VCP-201ENST00000358901 BTF3P20290 206 aaKnown RBP11.55□□□□□ -0.56
VCP-201ENST00000358901 IGHV1-2P23083 117 aa11.55□□□□□ -0.56
VCP-201ENST00000358901 LHX2P50458 406 aa11.55□□□□□ -0.56
VCP-201ENST00000358901 TMEM78Q5T7P6 136 aa11.55□□□□□ -0.56
VCP-201ENST00000358901 HEATR5AQ86XA9 2040 aa11.55□□□□□ -0.56
VCP-201ENST00000358901 CRYGSP22914 178 aa11.55□□□□□ -0.56
VCP-201ENST00000358901 C1QTNF9BB2RNN3 333 aa11.54□□□□□ -0.56
VCP-201ENST00000358901 CD5P06127 495 aa11.54□□□□□ -0.56
VCP-201ENST00000358901 PSMB2P49721 201 aa11.54□□□□□ -0.56
VCP-201ENST00000358901 COMPP49747 757 aaPredicted RBP11.54□□□□□ -0.56
VCP-201ENST00000358901 TIMM23BQ5SRD1 257 aa11.54□□□□□ -0.56
VCP-201ENST00000358901 LINC00305Q7Z4B0 112 aa11.54□□□□□ -0.56
VCP-201ENST00000358901 WDYHV1Q96HA8 205 aa11.54□□□□□ -0.56
VCP-201ENST00000358901 MRPL32Q9BYC8 188 aaKnown RBP11.54□□□□□ -0.56
VCP-201ENST00000358901 SLC25A34Q6PIV7 304 aa11.54□□□□□ -0.56
VCP-201ENST00000358901 C12orf54Q6X4T0 127 aa11.54□□□□□ -0.56
VCP-201ENST00000358901 OR4D5Q8NGN0 318 aa11.54□□□□□ -0.56
VCP-201ENST00000358901 IFI27L2Q9H2X8 130 aa11.54□□□□□ -0.56
VCP-201ENST00000358901 TRBV9A0A0B4J1U6 114 aa11.54□□□□□ -0.56
VCP-201ENST00000358901 C5orf52A6NGY3 159 aa11.54□□□□□ -0.56
VCP-201ENST00000358901 TFF1P04155 84 aa11.54□□□□□ -0.56
VCP-201ENST00000358901 NBEAP1P0C6P0 100 aa11.54□□□□□ -0.56
VCP-201ENST00000358901 TNFSF10P50591 281 aa11.54□□□□□ -0.56
VCP-201ENST00000358901 ATP5IP56385 69 aaPredicted RBP11.54□□□□□ -0.56
VCP-201ENST00000358901 HERVK_113P61574 105 aa11.54□□□□□ -0.56
VCP-201ENST00000358901 CTAG1AP78358 180 aa11.54□□□□□ -0.56
VCP-201ENST00000358901 LYRM7Q5U5X0 104 aa11.54□□□□□ -0.56
VCP-201ENST00000358901 DPRXA6NFQ7 191 aa11.53□□□□□ -0.56
VCP-201ENST00000358901 SH2D7A6NKC9 451 aaPredicted RBP11.53□□□□□ -0.56
VCP-201ENST00000358901 HIST1H2BKO60814 126 aa11.53□□□□□ -0.56
VCP-201ENST00000358901 RAMP3O60896 148 aa11.53□□□□□ -0.56
VCP-201ENST00000358901 NAPSAO96009 420 aa11.53□□□□□ -0.56
VCP-201ENST00000358901 HIST1H2BJP06899 126 aa11.53□□□□□ -0.56
VCP-201ENST00000358901 HIST1H2BOP23527 126 aa11.53□□□□□ -0.56
VCP-201ENST00000358901 HIST1H2BBP33778 126 aa11.53□□□□□ -0.56
VCP-201ENST00000358901 GPX4P36969 197 aaPredicted RBP11.53□□□□□ -0.56
VCP-201ENST00000358901 HIST1H2BDP58876 126 aa11.53□□□□□ -0.56
VCP-201ENST00000358901 HIST1H2BCP62807 126 aa11.53□□□□□ -0.56
VCP-201ENST00000358901 HIST2H2BEQ16778 126 aa11.53□□□□□ -0.56
VCP-201ENST00000358901 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.53□□□□□ -0.56
VCP-201ENST00000358901 LRTM2Q8N967 370 aa11.53□□□□□ -0.56
VCP-201ENST00000358901 HIST1H2BHQ93079 126 aa11.53□□□□□ -0.56
VCP-201ENST00000358901 HIST1H2BNQ99877 126 aa11.53□□□□□ -0.56
VCP-201ENST00000358901 HIST1H2BMQ99879 126 aa11.53□□□□□ -0.56
VCP-201ENST00000358901 COL25A1Q9BXS0 654 aaPredicted RBP11.53□□□□□ -0.56
VCP-201ENST00000358901 IL36BQ9NZH7 164 aa11.53□□□□□ -0.56
VCP-201ENST00000358901 DOCK9Q9BZ29 2069 aa11.53□□□□□ -0.56
VCP-201ENST00000358901 COLCA2A8K830 154 aa11.53□□□□□ -0.56
VCP-201ENST00000358901 MFAP4P55083 255 aa11.53□□□□□ -0.56
VCP-201ENST00000358901 WNT10AQ9GZT5 417 aa11.53□□□□□ -0.56
VCP-201ENST00000358901 IGHV2OR16-5A0A0B4J2B6 119 aa11.53□□□□□ -0.56
VCP-201ENST00000358901 UNQ5815/PRO19632Q6UWF5 114 aa11.53□□□□□ -0.56
VCP-201ENST00000358901 OSR1Q8TAX0 266 aaPredicted RBP11.53□□□□□ -0.56
VCP-201ENST00000358901 SIP14410 1827 aa11.53□□□□□ -0.56
VCP-201ENST00000358901 C1QTNF9P0C862 333 aa11.53□□□□□ -0.56
VCP-201ENST00000358901 LOXL3P58215 753 aa11.53□□□□□ -0.56
VCP-201ENST00000358901 RBPMS2Q6ZRY4 209 aaKnown RBP11.53□□□□□ -0.56
VCP-201ENST00000358901 DNM1P46Q6ZS02 220 aa11.53□□□□□ -0.56
VCP-201ENST00000358901 GTF3AQ92664 365 aaKnown RBP11.53□□□□□ -0.56
VCP-201ENST00000358901 NABP1Q96AH0 204 aa11.53□□□□□ -0.56
VCP-201ENST00000358901 AP5S1Q9NUS5 200 aa11.53□□□□□ -0.56
VCP-201ENST00000358901 FOXD3Q9UJU5 478 aaPredicted RBP11.53□□□□□ -0.56
VCP-201ENST00000358901 IGKV1-27A0A075B6S5 117 aa11.52□□□□□ -0.56
VCP-201ENST00000358901 HERPUD1Q15011 391 aa11.52□□□□□ -0.56
VCP-201ENST00000358901 TMEM30BQ3MIR4 351 aa11.52□□□□□ -0.56
VCP-201ENST00000358901 C2orf83Q53S99 150 aa11.52□□□□□ -0.56
VCP-201ENST00000358901 ZNF502Q8TBZ5 544 aa11.52□□□□□ -0.56
VCP-201ENST00000358901 ZCCHC14Q8WYQ9 949 aaKnown RBP11.52□□□□□ -0.56
VCP-201ENST00000358901 KBTBD11-OT1A0A1B0GTJ5 212 aa11.52□□□□□ -0.57
VCP-201ENST00000358901 GAGE10A6NGK3 116 aa11.52□□□□□ -0.57
VCP-201ENST00000358901 HLA-DRB1P01911 266 aa11.52□□□□□ -0.57
VCP-201ENST00000358901 IL4P05112 153 aa11.52□□□□□ -0.57
VCP-201ENST00000358901 PET117Q6UWS5 81 aa11.52□□□□□ -0.57
VCP-201ENST00000358901 MIR17HGQ75NE6 70 aa11.52□□□□□ -0.57
VCP-201ENST00000358901 PNKDQ8N490 385 aa11.52□□□□□ -0.57
VCP-201ENST00000358901 KCNS1Q96KK3 526 aa11.52□□□□□ -0.57
VCP-201ENST00000358901 CLEC7AQ9BXN2 247 aa11.52□□□□□ -0.57
VCP-201ENST00000358901 PGPEP1LA6NFU8 196 aa11.52□□□□□ -0.57
VCP-201ENST00000358901 IQCF6A8MYZ5 107 aa11.52□□□□□ -0.57
VCP-201ENST00000358901 CLPSP04118 112 aa11.52□□□□□ -0.57
VCP-201ENST00000358901 DLX1P56177 255 aa11.52□□□□□ -0.57
VCP-201ENST00000358901 FHL1Q13642 323 aa11.52□□□□□ -0.57
VCP-201ENST00000358901 ACSF3Q4G176 576 aaPredicted RBP11.52□□□□□ -0.57
VCP-201ENST00000358901 FAM131CQ96AQ9 280 aa11.52□□□□□ -0.57
VCP-201ENST00000358901 TBL2Q9Y4P3 447 aaKnown RBP11.52□□□□□ -0.57
VCP-201ENST00000358901 C16orf92Q96LL3 132 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 486.9 ms