RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 G6PC2Q9NQR9 355 aa8.66□□□□□ -1.02
CLIP1-202ENST00000358808 KLHDC2Q9Y2U9 406 aa8.66□□□□□ -1.02
CLIP1-202ENST00000358808 SVILO95425 2214 aa8.66□□□□□ -1.02
CLIP1-202ENST00000358808 SNAI2O43623 268 aa8.65□□□□□ -1.02
CLIP1-202ENST00000358808 APOHP02749 345 aaPredicted RBP8.65□□□□□ -1.02
CLIP1-202ENST00000358808 AGAP20933 346 aa8.65□□□□□ -1.02
CLIP1-202ENST00000358808 ERVK11-1P61568 191 aa8.65□□□□□ -1.02
CLIP1-202ENST00000358808 SNAI3Q3KNW1 292 aa8.65□□□□□ -1.02
CLIP1-202ENST00000358808 TMEM54Q969K7 222 aa8.65□□□□□ -1.02
CLIP1-202ENST00000358808 GPHA2Q96T91 129 aa8.65□□□□□ -1.02
CLIP1-202ENST00000358808 A0A1W2PPV9 198 aa8.65□□□□□ -1.02
CLIP1-202ENST00000358808 CSRP2Q16527 193 aa8.65□□□□□ -1.02
CLIP1-202ENST00000358808 GFI1BQ5VTD9 330 aa8.65□□□□□ -1.02
CLIP1-202ENST00000358808 ZPLD1Q8TCW7 415 aa8.65□□□□□ -1.02
CLIP1-202ENST00000358808 ST20Q9HBF5 79 aa8.65□□□□□ -1.02
CLIP1-202ENST00000358808 SPTA1P02549 2419 aa8.65□□□□□ -1.02
CLIP1-202ENST00000358808 DOCK5Q9H7D0 1870 aa8.65□□□□□ -1.02
CLIP1-202ENST00000358808 TRAV8-2A0A0B4J237 113 aa8.65□□□□□ -1.02
CLIP1-202ENST00000358808 ZNF98A6NK75 572 aa8.65□□□□□ -1.02
CLIP1-202ENST00000358808 GGTLC3B5MD39 225 aa8.65□□□□□ -1.02
CLIP1-202ENST00000358808 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.65□□□□□ -1.02
CLIP1-202ENST00000358808 RTN4RL2Q86UN3 420 aa8.65□□□□□ -1.02
CLIP1-202ENST00000358808 WFIKKN1Q96NZ8 548 aa8.65□□□□□ -1.02
CLIP1-202ENST00000358808 ZNFX1Q9P2E3 1918 aaKnown RBP8.65□□□□□ -1.02
CLIP1-202ENST00000358808 RPL39P5Q59GN2 51 aa8.65□□□□□ -1.02
CLIP1-202ENST00000358808 A0A087WX48 190 aa8.65□□□□□ -1.03
CLIP1-202ENST00000358808 FOXS1O43638 330 aa8.65□□□□□ -1.03
CLIP1-202ENST00000358808 CD33P20138 364 aa8.65□□□□□ -1.03
CLIP1-202ENST00000358808 FOXA3P55318 350 aaPredicted RBP8.65□□□□□ -1.03
CLIP1-202ENST00000358808 CENPWQ5EE01 88 aa8.65□□□□□ -1.03
CLIP1-202ENST00000358808 ZNF818PQ6ZRF7 136 aa8.65□□□□□ -1.03
CLIP1-202ENST00000358808 RNF182Q8N6D2 247 aa8.65□□□□□ -1.03
CLIP1-202ENST00000358808 SLC25A2Q9BXI2 301 aa8.65□□□□□ -1.03
CLIP1-202ENST00000358808 TMEM50AO95807 157 aa8.64□□□□□ -1.03
CLIP1-202ENST00000358808 NAPSAO96009 420 aa8.64□□□□□ -1.03
CLIP1-202ENST00000358808 CD28P10747 220 aa8.64□□□□□ -1.03
CLIP1-202ENST00000358808 PTGDSP41222 190 aa8.64□□□□□ -1.03
CLIP1-202ENST00000358808 SLC25A45Q8N413 288 aa8.64□□□□□ -1.03
CLIP1-202ENST00000358808 PRADC1Q9BSG0 188 aa8.64□□□□□ -1.03
CLIP1-202ENST00000358808 NPCDR1Q9BY65 106 aa8.64□□□□□ -1.03
CLIP1-202ENST00000358808 A0A0U1RRA0 63 aa8.64□□□□□ -1.03
CLIP1-202ENST00000358808 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.64□□□□□ -1.03
CLIP1-202ENST00000358808 SIGLEC5O15389 551 aa8.64□□□□□ -1.03
CLIP1-202ENST00000358808 GCHFRP30047 84 aa8.64□□□□□ -1.03
CLIP1-202ENST00000358808 GP6Q9HCN6 339 aa8.64□□□□□ -1.03
CLIP1-202ENST00000358808 GPR132Q9UNW8 380 aa8.64□□□□□ -1.03
CLIP1-202ENST00000358808 DUSP14O95147 198 aaKnown RBP8.64□□□□□ -1.03
CLIP1-202ENST00000358808 SMDT1Q9H4I9 107 aa8.64□□□□□ -1.03
CLIP1-202ENST00000358808 LOC102723996A0A087X1L8 192 aa8.64□□□□□ -1.03
CLIP1-202ENST00000358808 TRBV9A0A0B4J1U6 114 aa8.64□□□□□ -1.03
CLIP1-202ENST00000358808 HBDP02042 147 aa8.64□□□□□ -1.03
CLIP1-202ENST00000358808 CEACAM8P31997 349 aaPredicted RBP8.64□□□□□ -1.03
CLIP1-202ENST00000358808 FHITP49789 147 aa8.64□□□□□ -1.03
CLIP1-202ENST00000358808 FAM27E3Q08E93 113 aa8.64□□□□□ -1.03
CLIP1-202ENST00000358808 ZNRF1Q8ND25 227 aa8.64□□□□□ -1.03
CLIP1-202ENST00000358808 PEF1Q9UBV8 284 aaKnown RBP8.64□□□□□ -1.03
CLIP1-202ENST00000358808 FAM90A26D6RGX4 464 aa8.64□□□□□ -1.03
CLIP1-202ENST00000358808 BSPH1Q075Z2 132 aa8.64□□□□□ -1.03
CLIP1-202ENST00000358808 ZNF345Q14585 488 aa8.64□□□□□ -1.03
CLIP1-202ENST00000358808 SDHCQ99643 169 aaPredicted RBP8.64□□□□□ -1.03
CLIP1-202ENST00000358808 FAM90A10PA6NDY2 464 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 FAM90A18PA6NE21 464 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 FAM90A16PA6NEW6 464 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 FAM90A20PA6NIJ5 464 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 FAM90A8PA6NJQ4 464 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 FAM90A7PA6NKC0 464 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 FAM90A22PA8MWA6 464 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 FAM90A12PA8MX19 464 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 FAM90A5PA8MXJ8 464 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 FAM90A23PA8MXZ1 464 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 INS-IGF2F8WCM5 200 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 CA1P00915 261 aaPredicted RBP8.63□□□□□ -1.03
CLIP1-202ENST00000358808 INSP01308 110 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 FAM90A15PP0C7V4 464 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 FAM90A13PP0C7W8 464 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 FAM90A14PP0C7W9 464 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 FAM90A24PP0C7X0 464 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 SRSF7Q16629 238 aaKnown RBP eCLIP8.63□□□□□ -1.03
CLIP1-202ENST00000358808 GATD1Q8NB37 220 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 TMEM52Q8NDY8 209 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 WFDC12Q8WWY7 111 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 HIST1H2BAQ96A08 127 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 SMCHD1A6NHR9 2005 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 TRAV2A0A0B4J234 112 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 TOMM40O96008 361 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 SRSF6Q13247 344 aaKnown RBP8.63□□□□□ -1.03
CLIP1-202ENST00000358808 ZIC4Q8N9L1 334 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 FER1L6-AS1Q8NA97 138 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 SRXN1Q9BYN0 137 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 ALX4Q9H161 411 aaPredicted RBP8.63□□□□□ -1.03
CLIP1-202ENST00000358808 LINC00614P0C842 121 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 LAMTOR3Q9UHA4 124 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 IGKV1D-16P01601 117 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 FOXJ2Q9P0K8 574 aa8.63□□□□□ -1.03
CLIP1-202ENST00000358808 LOC101059948A0A1B0GTJ6 334 aa8.62□□□□□ -1.03
CLIP1-202ENST00000358808 C1QL1O75973 258 aa8.62□□□□□ -1.03
CLIP1-202ENST00000358808 TMEM91Q6ZNR0 172 aa8.62□□□□□ -1.03
CLIP1-202ENST00000358808 ST6GALNAC3Q8NDV1 305 aa8.62□□□□□ -1.03
CLIP1-202ENST00000358808 VAX1Q5SQQ9 334 aa8.62□□□□□ -1.03
CLIP1-202ENST00000358808 A0A0G2JMZ2 1700 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms