RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 MNX1P50219 401 aaPredicted RBP3.48□□□□□ -1.85
SYNE2-204ENST00000358025 PSG2P11465 335 aa3.48□□□□□ -1.85
SYNE2-204ENST00000358025 IGHV1-24A0A0C4DH33 117 aa3.48□□□□□ -1.85
SYNE2-204ENST00000358025 PEX7O00628 323 aa3.48□□□□□ -1.85
SYNE2-204ENST00000358025 CASP6P55212 293 aa3.48□□□□□ -1.85
SYNE2-204ENST00000358025 TTC32Q5I0X7 151 aa3.48□□□□□ -1.85
SYNE2-204ENST00000358025 RNASEKQ6P5S7 137 aaKnown RBP3.48□□□□□ -1.85
SYNE2-204ENST00000358025 C6orf15Q6UXA7 325 aaPredicted RBP3.48□□□□□ -1.85
SYNE2-204ENST00000358025 GGTLC1Q9BX51 225 aa3.48□□□□□ -1.85
SYNE2-204ENST00000358025 LOC102723996A0A087X1L8 192 aa3.48□□□□□ -1.85
SYNE2-204ENST00000358025 CRYGSP22914 178 aa3.48□□□□□ -1.85
SYNE2-204ENST00000358025 SRSF9Q13242 221 aaKnown RBP eCLIP3.48□□□□□ -1.85
SYNE2-204ENST00000358025 C1QL2Q7Z5L3 287 aa3.48□□□□□ -1.85
SYNE2-204ENST00000358025 POLR3KQ9Y2Y1 108 aaPredicted RBP3.48□□□□□ -1.85
SYNE2-204ENST00000358025 NBEAP1P0C6P0 100 aa3.48□□□□□ -1.85
SYNE2-204ENST00000358025 YRDCQ86U90 279 aaKnown RBP3.48□□□□□ -1.85
SYNE2-204ENST00000358025 FLYWCH2Q96CP2 140 aaKnown RBP3.48□□□□□ -1.85
SYNE2-204ENST00000358025 GRPP07492 148 aa3.48□□□□□ -1.85
SYNE2-204ENST00000358025 MLF1P58340 268 aa3.48□□□□□ -1.85
SYNE2-204ENST00000358025 WNT16Q9UBV4 365 aa3.48□□□□□ -1.85
SYNE2-204ENST00000358025 OR2H2O95918 312 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 FTH1P19P0C7X4 201 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 LDLRAD2Q5SZI1 272 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 Q6ZS92 163 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 AGRNO00468 2067 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 SYS1-DBNDD2H3BUS1 97 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-204ENST00000358025 WIPI1Q5MNZ9 446 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-204ENST00000358025 CCDC144NLQ6NUI1 221 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 SARAFQ96BY9 339 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 FAM103A1Q9BTL3 118 aaKnown RBP3.47□□□□□ -1.85
SYNE2-204ENST00000358025 HIF1ANQ9NWT6 349 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 MEF2CQ06413 473 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-204ENST00000358025 SPEM2Q0P670 501 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 PCSK4Q6UW60 755 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 ZPLD1Q8TCW7 415 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 HES4Q9HCC6 221 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 EML5Q05BV3 1969 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 IL4P05112 153 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 TDGF1P13385 188 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 ID4P47928 161 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 PRSS41Q7RTY9 318 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 C1orf147Q96MC9 270 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-204ENST00000358025 A0A1W2PNR3 127 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 CRXO43186 299 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-204ENST00000358025 RPS27P42677 84 aaKnown RBP3.47□□□□□ -1.85
SYNE2-204ENST00000358025 UBALD2Q8IYN6 164 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 ZADH2Q8N4Q0 377 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 OCC1Q8TAD7 63 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 BADQ92934 168 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 DMRTA2Q96SC8 542 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 WDR87Q6ZQQ6 2873 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 PSG4Q00888 419 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 SPRED2Q7Z698 418 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 CIARTQ8N365 385 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-204ENST00000358025 LPAR2Q9HBW0 351 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 EDDM3BP56851 147 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 TMEM131Q92545 1883 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 XIRP1Q702N8 1843 aaKnown RBP3.47□□□□□ -1.85
SYNE2-204ENST00000358025 A0A1W2PPE3 182 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 CXCL1P09341 107 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 KLK2P20151 261 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 AESQ08117 197 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 RFLNBQ8N5W9 214 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 TMEM14BQ9NUH8 114 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 SRIP30626 198 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 PSG9Q00887 426 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 ZNF816Q0VGE8 651 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-204ENST00000358025 GAB4Q2WGN9 574 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 TRGV9Q99603 122 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 SPINT1O43278 529 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 HINT1P49773 126 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-204ENST00000358025 CITED2Q99967 270 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-204ENST00000358025 MAP1LC3AQ9H492 121 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 KIF26AQ9ULI4 1882 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-204ENST00000358025 FAM181BA6NEQ2 426 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 ZFAND6Q6FIF0 208 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 ZNF441Q8N8Z8 693 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 RPP21Q9H633 154 aaKnown RBP3.47□□□□□ -1.85
SYNE2-204ENST00000358025 PRR14LQ5THK1 2151 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 RNFT1Q5M7Z0 435 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 OR10W1Q8NGF6 305 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 SSC4DQ8WTU2 575 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 CITED1Q99966 193 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 CKS2P33552 79 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 IZUMO4Q1ZYL8 232 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 VHLLQ6RSH7 139 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 MUC15Q8N387 334 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 TMEM116Q8NCL8 245 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 OTOGLQ3ZCN5 2332 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 FOXI3A8MTJ6 420 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-204ENST00000358025 OR2J3O76001 311 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 DPM2O94777 84 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 NXPH3O95157 252 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 FGF8P55075 233 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-204ENST00000358025 PDE6HQ13956 83 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 AMMECR1LQ6DCA0 310 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 KBTBD11-OT1A0A1B0GTJ5 212 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 PRR32B1ATL7 298 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 EFNB3Q15768 340 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms