RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 GAGE2EQ4V326 116 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 BIVMQ86UB2 503 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 NUDT10Q8NFP7 164 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 GAGE2DQ9UEU5 116 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 STAB2Q8WWQ8 2551 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 MEX3AA1L020 520 aaKnown RBP5.62□□□□□ -1.51
VPS13B-202ENST00000357162 NUDT8Q8WV74 236 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 OR2J3O76001 311 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 WNT2BQ93097 391 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 MRPS18CQ9Y3D5 142 aaKnown RBP5.62□□□□□ -1.51
VPS13B-202ENST00000357162 INAFM2P0DMQ5 153 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 NXPH1P58417 271 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 ZNF788Q6ZQV5 615 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 A0A1B0GWB2 263 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 HIGD1CA8MV81 97 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 CBLN1P23435 193 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 ZNF488Q96MN9 340 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 SIRT4Q9Y6E7 314 aaPredicted RBP5.62□□□□□ -1.51
VPS13B-202ENST00000357162 ESDP10768 282 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 TIMP3P35625 211 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 SOX8P57073 446 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 C2orf83Q53S99 150 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 C11orf68Q9H3H3 251 aaKnown RBP5.62□□□□□ -1.51
VPS13B-202ENST00000357162 AHRRA9YTQ3 701 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 M0R1B8 84 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 FAM157BP0CG42 384 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 CD40P25942 277 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 GFERP55789 205 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 DCAF10Q5QP82 559 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 SELENOHQ8IZQ5 122 aaKnown RBP5.62□□□□□ -1.51
VPS13B-202ENST00000357162 ZNF502Q8TBZ5 544 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 TSKUQ8WUA8 353 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 APOMO95445 188 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 OR10J6PQ8NGY7 276 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 SLC50A1Q9BRV3 221 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 SP9P0CG40 484 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 ACTL10Q5JWF8 245 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 C1QL3Q5VWW1 255 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 PVRIGQ6DKI7 326 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 REG4Q9BYZ8 158 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 TINAGQ9UJW2 476 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 KLF2Q9Y5W3 355 aaPredicted RBP5.61□□□□□ -1.51
VPS13B-202ENST00000357162 J3QRE1 110 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 AMBPP02760 352 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 EFNB2P52799 333 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 ID3Q02535 119 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 OR13C6PQ8NH95 151 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 C1QTNF5Q9BXJ0 243 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 A8MWV9 139 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 H3BVH4 76 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 HBDP02042 147 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 MFAP4P55083 255 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 MLF1P58340 268 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 TEX38Q6PEX7 206 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 BCL6BQ8N143 479 aaPredicted RBP5.61□□□□□ -1.51
VPS13B-202ENST00000357162 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.61□□□□□ -1.51
VPS13B-202ENST00000357162 GDF9O60383 454 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 TSPAN13O95857 204 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 PDE6HQ13956 83 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 LY6G6FQ5SQ64 297 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 C10orf91Q5T1B1 145 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 C8orf44Q96CB5 159 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 A8MWP6 167 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 IQCF6A8MYZ5 107 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 F8W1H4 67 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 OR9G1Q8NH87 305 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 GNG10P50151 68 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 GLRX5Q86SX6 157 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 GEMIN7Q9H840 131 aaKnown RBP5.61□□□□□ -1.51
VPS13B-202ENST00000357162 FAM181BA6NEQ2 426 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 Q0VG73 95 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 SRSF2Q01130 221 aaKnown RBP5.61□□□□□ -1.51
VPS13B-202ENST00000357162 VHLLQ6RSH7 139 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 LYPD1Q8N2G4 141 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 OR52M1Q8NGK5 317 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 PIN1P1O15428 100 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 RPL27AP46776 148 aaKnown RBP5.61□□□□□ -1.51
VPS13B-202ENST00000357162 A0A1W2PPV9 198 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 DLX6P56179 175 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 ZP1P60852 638 aa5.61□□□□□ -1.51
VPS13B-202ENST00000357162 NUP210Q8TEM1 1887 aaPredicted RBP5.61□□□□□ -1.51
VPS13B-202ENST00000357162 VKORC1L1Q8N0U8 176 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 SRSF8Q9BRL6 282 aaKnown RBP5.6□□□□□ -1.51
VPS13B-202ENST00000357162 A0A0G2JLM5 398 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 F2RL2O00254 374 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 F12P00748 615 aaPredicted RBP5.6□□□□□ -1.51
VPS13B-202ENST00000357162 GAGE13Q4V321 117 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 OTPQ5XKR4 325 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 C18orf12Q96KH6 178 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 RNF5Q99942 180 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 C6orf106Q9H6K1 298 aaPredicted RBP5.6□□□□□ -1.51
VPS13B-202ENST00000357162 DPM2O94777 84 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 FAM222BQ8WU58 562 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 TMEM208Q9BTX3 173 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 PTPRBP23467 1997 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 Q5BKY6 102 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 OTORQ9NRC9 128 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.6□□□□□ -1.51
VPS13B-202ENST00000357162 C5orf67F2Z3F1 127 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 FAM53AQ6NSI3 398 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms