RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 GAGE10A6NGK3 116 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 NBR2O15453 112 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 CDKN1AP38936 164 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 CA7P43166 264 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 FOXL2P58012 376 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 UNC119Q13432 240 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 C1QL4Q86Z23 238 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 CBLN2Q8IUK8 224 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 KIR3DL3Q8N743 410 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 AQP3Q92482 292 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 SMIM8Q96KF7 97 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 TOMM7Q9P0U1 55 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 LINC00587B1AMM8 73 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 PSCAO43653 123 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 ZG16O60844 167 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 RPL39P5Q59GN2 51 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 PEAR1Q5VY43 1037 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-202ENST00000356435 CYB5R2Q6BCY4 276 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 CIARTQ8N365 385 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-202ENST00000356435 JKAMPQ9P055 326 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 SAP30O75446 220 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 ERGP11308 486 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 EGR1P18146 543 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 RCC1P18754 421 aaPredicted RBP4.69□□□□□ -1.66
PTPRD-202ENST00000356435 Q96M66 194 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 SLC50A1Q9BRV3 221 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 FAM206AQ9NX38 181 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 F11RQ9Y624 299 aaKnown RBP4.69□□□□□ -1.66
PTPRD-202ENST00000356435 ZNF124Q15973 351 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 C20orf204Q6ZNR8 217 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 RRHO14718 337 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 CECR9P0C854 216 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 CD33P20138 364 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 VKORC1L1Q8N0U8 176 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 MRPL18Q9H0U6 180 aaKnown RBP4.69□□□□□ -1.66
PTPRD-202ENST00000356435 SPANXA1Q9NS26 97 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 SIRT4Q9Y6E7 314 aaPredicted RBP4.69□□□□□ -1.66
PTPRD-202ENST00000356435 IGLV1-36A0A0B4J1U3 117 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 TRGV4A0A0C4DH28 118 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 F8VVB4 439 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 F8VWA3 439 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 F8WEM9 126 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 NPBWR2P48146 333 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 SNAI3Q3KNW1 292 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 OR10J3Q5JRS4 329 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 Q6AWC8 147 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 LRTM2Q8N967 370 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 OR9G4Q8NGQ1 327 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 ISOC2Q96AB3 205 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 NABP2Q9BQ15 211 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 PRDM6Q9NQX0 595 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 ADAMTSL1Q8N6G6 1762 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 IGLV3-21P80748 117 aaPredicted RBP4.69□□□□□ -1.66
PTPRD-202ENST00000356435 ZNF415Q09FC8 603 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 RARRES2Q99969 163 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 HSPB9Q9BQS6 159 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 IFI27L2Q9H2X8 130 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 PARLQ9H300 379 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 MRPL16Q9NX20 251 aaKnown RBP4.69□□□□□ -1.66
PTPRD-202ENST00000356435 BRWD1Q9NSI6 2320 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 KBTBD11-OT1A0A1B0GTJ5 212 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 A0A1W2PP11 408 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 FAM27E3Q08E93 113 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 TTC32Q5I0X7 151 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 FAM166AQ6J272 317 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 GATAD1Q8WUU5 269 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 GPR146Q96CH1 333 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 ZNF414Q96IQ9 312 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 GGACTQ9BVM4 153 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 IGHV3-11P01762 117 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 UCP3P55916 312 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 PLP1P60201 277 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 ZNF818PQ6ZRF7 136 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 NPIPB3Q92617 1050 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 SCGB3A1Q96QR1 104 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 SOX21Q9Y651 276 aaPredicted RBP4.69□□□□□ -1.66
PTPRD-202ENST00000356435 NANOS3P60323 173 aaKnown RBP4.69□□□□□ -1.66
PTPRD-202ENST00000356435 FBXL15Q9H469 300 aa4.69□□□□□ -1.66
PTPRD-202ENST00000356435 GCHFRP30047 84 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 DEFB121Q5J5C9 76 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 ATP5LO75964 103 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 CD5P06127 495 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 ATRAIDQ6UW56 229 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 DRAM1Q8N682 238 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 TMEM252Q8N6L7 170 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 IGKV1-8A0A0C4DH67 115 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 WDR82Q6UXN9 313 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 SRIP30626 198 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 C1orf100Q5SVJ3 147 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 RNF114Q9Y508 228 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 IGHV3-49A0A0A0MS15 119 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 SPACA3Q8IXA5 215 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 FAM216BQ8N7L0 139 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 MRPL20Q9BYC9 149 aaKnown RBP4.68□□□□□ -1.66
PTPRD-202ENST00000356435 UQCR10Q9UDW1 63 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 ANKRD31Q8N7Z5 1873 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 WNT2P09544 360 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 SMIM13P0DJ93 91 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 CRYBB3P26998 211 aa4.68□□□□□ -1.66
PTPRD-202ENST00000356435 IFI27P40305 119 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms