RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 C1orf194Q5T5A4 169 aa17.52■□□□□ 0.39
PTPN18-202ENST00000347849 Q8N7P7 452 aa17.52■□□□□ 0.39
PTPN18-202ENST00000347849 TMEM204Q9BSN7 226 aa17.52■□□□□ 0.39
PTPN18-202ENST00000347849 PATZ1Q9HBE1 687 aaKnown RBP17.52■□□□□ 0.39
PTPN18-202ENST00000347849 ZNF705FA8MVS1 300 aaPredicted RBP17.51■□□□□ 0.39
PTPN18-202ENST00000347849 M0R143 59 aa17.51■□□□□ 0.39
PTPN18-202ENST00000347849 RAB29O14966 203 aa17.51■□□□□ 0.39
PTPN18-202ENST00000347849 RBFOX2O43251 390 aaKnown RBP eCLIP17.51■□□□□ 0.392e-6■■■□□ 16.6
PTPN18-202ENST00000347849 PROP1O75360 226 aa17.51■□□□□ 0.39
PTPN18-202ENST00000347849 ZNF705DP0CH99 300 aaPredicted RBP17.51■□□□□ 0.39
PTPN18-202ENST00000347849 ZNF705BP0CI00 300 aaPredicted RBP17.51■□□□□ 0.39
PTPN18-202ENST00000347849 FOXL1Q12952 345 aa17.51■□□□□ 0.39
PTPN18-202ENST00000347849 SDSLQ96GA7 329 aa17.51■□□□□ 0.39
PTPN18-202ENST00000347849 LINC00473A8K010 186 aa17.5■□□□□ 0.39
PTPN18-202ENST00000347849 TMPRSS2O15393 492 aa17.5■□□□□ 0.39
PTPN18-202ENST00000347849 CD99P14209 185 aa17.5■□□□□ 0.39
PTPN18-202ENST00000347849 HNF1AP20823 631 aa17.5■□□□□ 0.39
PTPN18-202ENST00000347849 CD1BP29016 333 aa17.5■□□□□ 0.39
PTPN18-202ENST00000347849 SFRP2Q96HF1 295 aa17.5■□□□□ 0.39
PTPN18-202ENST00000347849 GRIFINA4D1Z8 144 aa17.5■□□□□ 0.39
PTPN18-202ENST00000347849 RBPJQ06330 500 aa17.5■□□□□ 0.39
PTPN18-202ENST00000347849 FAM222BQ8WU58 562 aa17.5■□□□□ 0.39
PTPN18-202ENST00000347849 CCL13Q99616 98 aa17.5■□□□□ 0.39
PTPN18-202ENST00000347849 C15orf62A8K5M9 175 aa17.49■□□□□ 0.39
PTPN18-202ENST00000347849 SPINT2O43291 252 aa17.49■□□□□ 0.39
PTPN18-202ENST00000347849 ZNF134P52741 427 aa17.49■□□□□ 0.39
PTPN18-202ENST00000347849 FAM216BQ8N7L0 139 aa17.49■□□□□ 0.39
PTPN18-202ENST00000347849 LEAP2Q969E1 77 aa17.49■□□□□ 0.39
PTPN18-202ENST00000347849 VKORC1Q9BQB6 163 aa17.49■□□□□ 0.39
PTPN18-202ENST00000347849 QTRT1Q9BXR0 403 aaKnown RBP17.49■□□□□ 0.39
PTPN18-202ENST00000347849 OR10J1P30954 320 aa17.49■□□□□ 0.39
PTPN18-202ENST00000347849 ADMP35318 185 aa17.49■□□□□ 0.39
PTPN18-202ENST00000347849 STUMQ69YW2 141 aa17.49■□□□□ 0.39
PTPN18-202ENST00000347849 TBX15Q96SF7 602 aa17.49■□□□□ 0.39
PTPN18-202ENST00000347849 KCNIP2Q9NS61 270 aa17.49■□□□□ 0.39
PTPN18-202ENST00000347849 TRBV20OR9-2A0A075B6H5 130 aa17.48■□□□□ 0.39
PTPN18-202ENST00000347849 SOX15O60248 233 aa17.48■□□□□ 0.39
PTPN18-202ENST00000347849 GRNP28799 593 aaKnown RBP17.48■□□□□ 0.39
PTPN18-202ENST00000347849 LOXL3P58215 753 aa17.48■□□□□ 0.39
PTPN18-202ENST00000347849 DIRC2Q96SL1 478 aa17.48■□□□□ 0.39
PTPN18-202ENST00000347849 WDR83OSQ9Y284 106 aa17.48■□□□□ 0.39
PTPN18-202ENST00000347849 MDFIC2A0A1B0GVS7 189 aa17.48■□□□□ 0.39
PTPN18-202ENST00000347849 F6UZH7 168 aa17.48■□□□□ 0.39
PTPN18-202ENST00000347849 RPL29P47914 159 aaKnown RBP17.48■□□□□ 0.39
PTPN18-202ENST00000347849 HTD2P86397 168 aa17.48■□□□□ 0.39
PTPN18-202ENST00000347849 GAFA1Q96PS6 74 aa17.48■□□□□ 0.39
PTPN18-202ENST00000347849 IMMP2LQ96T52 175 aa17.48■□□□□ 0.39
PTPN18-202ENST00000347849 GNG12Q9UBI6 72 aa17.48■□□□□ 0.39
PTPN18-202ENST00000347849 DYSFO75923 2080 aa17.48■□□□□ 0.39
PTPN18-202ENST00000347849 MARCH11A6NNE9 402 aa17.47■□□□□ 0.39
PTPN18-202ENST00000347849 C17orf100A8MU93 164 aa17.47■□□□□ 0.39
PTPN18-202ENST00000347849 CDSNQ15517 529 aa17.47■□□□□ 0.39
PTPN18-202ENST00000347849 MORN2Q502X0 79 aa17.47■□□□□ 0.39
PTPN18-202ENST00000347849 BTF3L4Q96K17 158 aa17.47■□□□□ 0.39
PTPN18-202ENST00000347849 UCNP55089 124 aa17.47■□□□□ 0.39
PTPN18-202ENST00000347849 CR1LQ2VPA4 569 aa17.47■□□□□ 0.39
PTPN18-202ENST00000347849 ZNF705AQ6ZN79 300 aaPredicted RBP17.47■□□□□ 0.39
PTPN18-202ENST00000347849 C1orf229Q6ZS94 237 aaPredicted RBP17.47■□□□□ 0.39
PTPN18-202ENST00000347849 RAI1Q7Z5J4 1906 aaPredicted RBP17.47■□□□□ 0.39
PTPN18-202ENST00000347849 TNFSF4P23510 183 aa17.46■□□□□ 0.39
PTPN18-202ENST00000347849 THBS3P49746 956 aa17.46■□□□□ 0.39
PTPN18-202ENST00000347849 C17orf58Q2M2W7 97 aa17.46■□□□□ 0.39
PTPN18-202ENST00000347849 KIR2DL5BA0A0G2JN68 375 aa17.46■□□□□ 0.39
PTPN18-202ENST00000347849 KIR2DL5BA0A0G2JPC4 375 aa17.46■□□□□ 0.39
PTPN18-202ENST00000347849 SHISA9B4DS77 424 aa17.46■□□□□ 0.39
PTPN18-202ENST00000347849 ARL14EPLP0DKL9 152 aa17.46■□□□□ 0.39
PTPN18-202ENST00000347849 CGB3P0DN86 165 aa17.46■□□□□ 0.39
PTPN18-202ENST00000347849 CGB7P0DN87 165 aa17.46■□□□□ 0.39
PTPN18-202ENST00000347849 CYB5R2Q6BCY4 276 aa17.46■□□□□ 0.39
PTPN18-202ENST00000347849 KIR2DL5AQ8N109 375 aa17.46■□□□□ 0.39
PTPN18-202ENST00000347849 OCC1Q8TAD7 63 aa17.46■□□□□ 0.39
PTPN18-202ENST00000347849 PPP1R35Q8TAP8 253 aa17.46■□□□□ 0.39
PTPN18-202ENST00000347849 CMTM2Q8TAZ6 248 aa17.46■□□□□ 0.39
PTPN18-202ENST00000347849 LRBAP50851 2863 aa17.46■□□□□ 0.39
PTPN18-202ENST00000347849 ADH4P08319 380 aa17.45■□□□□ 0.38
PTPN18-202ENST00000347849 OR9G9P0C7N8 305 aa17.45■□□□□ 0.38
PTPN18-202ENST00000347849 RAB4AP20338 218 aa17.45■□□□□ 0.38
PTPN18-202ENST00000347849 TDRG1Q3Y452 100 aa17.45■□□□□ 0.38
PTPN18-202ENST00000347849 LINC01560Q8TB33 94 aa17.45■□□□□ 0.38
PTPN18-202ENST00000347849 Q8TCH9 128 aa17.45■□□□□ 0.38
PTPN18-202ENST00000347849 ZCCHC14Q8WYQ9 949 aaKnown RBP17.45■□□□□ 0.38
PTPN18-202ENST00000347849 RAB1CQ92928 201 aa17.45■□□□□ 0.38
PTPN18-202ENST00000347849 CALYQ9NYX4 217 aa17.45■□□□□ 0.38
PTPN18-202ENST00000347849 FAM90A27PA6NNH2 459 aa17.45■□□□□ 0.38
PTPN18-202ENST00000347849 E7EQL1 145 aa17.45■□□□□ 0.38
PTPN18-202ENST00000347849 HPRT1P00492 218 aa17.45■□□□□ 0.38
PTPN18-202ENST00000347849 RPL39P5Q59GN2 51 aa17.45■□□□□ 0.38
PTPN18-202ENST00000347849 SCO2A0A1W2PP80 73 aa17.44■□□□□ 0.38
PTPN18-202ENST00000347849 PLAUP00749 431 aa17.44■□□□□ 0.38
PTPN18-202ENST00000347849 ZNF25P17030 456 aaPredicted RBP17.44■□□□□ 0.38
PTPN18-202ENST00000347849 R3HDM4Q96D70 268 aa17.44■□□□□ 0.38
PTPN18-202ENST00000347849 ITPR1Q14643 2758 aa17.44■□□□□ 0.38
PTPN18-202ENST00000347849 FCN3O75636 299 aa17.44■□□□□ 0.38
PTPN18-202ENST00000347849 CBLN1P23435 193 aa17.44■□□□□ 0.38
PTPN18-202ENST00000347849 TRAT1Q6PIZ9 186 aa17.44■□□□□ 0.38
PTPN18-202ENST00000347849 ZNF788Q6ZQV5 615 aa17.44■□□□□ 0.38
PTPN18-202ENST00000347849 OR10G8Q8NGN5 311 aa17.44■□□□□ 0.38
PTPN18-202ENST00000347849 FAM234AQ9H0X4 552 aa17.44■□□□□ 0.38
PTPN18-202ENST00000347849 TMEM106BQ9NUM4 274 aa17.44■□□□□ 0.38
PTPN18-202ENST00000347849 MMP23AO75900 390 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms