RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 PLEKHA2Q9HB19 425 aa12.65□□□□□ -0.38
RAB5C-201ENST00000346213 NSG2Q9Y328 171 aa12.65□□□□□ -0.38
RAB5C-201ENST00000346213 FGF16O43320 207 aa12.64□□□□□ -0.39
RAB5C-201ENST00000346213 IGHG2P01859 326 aa12.64□□□□□ -0.39
RAB5C-201ENST00000346213 OPN1MWP04001 364 aa12.64□□□□□ -0.39
RAB5C-201ENST00000346213 OPN1MW2P0DN77 364 aa12.64□□□□□ -0.39
RAB5C-201ENST00000346213 OPN1MW3P0DN78 364 aa12.64□□□□□ -0.39
RAB5C-201ENST00000346213 RAB14P61106 215 aa12.64□□□□□ -0.39
RAB5C-201ENST00000346213 ZNF585BQ52M93 769 aa12.64□□□□□ -0.39
RAB5C-201ENST00000346213 NDUFA11Q86Y39 141 aa12.64□□□□□ -0.39
RAB5C-201ENST00000346213 FAM219AQ8IW50 185 aa12.64□□□□□ -0.39
RAB5C-201ENST00000346213 ZNF471Q9BX82 626 aaPredicted RBP12.64□□□□□ -0.39
RAB5C-201ENST00000346213 FAM212BQ9NTI7 297 aaPredicted RBP12.64□□□□□ -0.39
RAB5C-201ENST00000346213 LINC00862A6NCI5 91 aa12.64□□□□□ -0.39
RAB5C-201ENST00000346213 SPDEFO95238 335 aa12.64□□□□□ -0.39
RAB5C-201ENST00000346213 IGKV1-39P01597 117 aa12.64□□□□□ -0.39
RAB5C-201ENST00000346213 IGKV1D-39P04432 117 aa12.64□□□□□ -0.39
RAB5C-201ENST00000346213 RPL12P30050 165 aaKnown RBP12.64□□□□□ -0.39
RAB5C-201ENST00000346213 CATR1Q13166 79 aa12.64□□□□□ -0.39
RAB5C-201ENST00000346213 ZNF66Q6ZN08 573 aa12.64□□□□□ -0.39
RAB5C-201ENST00000346213 ETV3LQ6ZN32 361 aa12.64□□□□□ -0.39
RAB5C-201ENST00000346213 STOML3Q8TAV4 291 aa12.64□□□□□ -0.39
RAB5C-201ENST00000346213 S1PR3Q99500 378 aa12.64□□□□□ -0.39
RAB5C-201ENST00000346213 A0A1B0GU03 582 aa12.63□□□□□ -0.39
RAB5C-201ENST00000346213 MOSP00540 346 aa12.63□□□□□ -0.39
RAB5C-201ENST00000346213 CT45A6P0DMU7 189 aa12.63□□□□□ -0.39
RAB5C-201ENST00000346213 CT45A5P0DMU8 189 aa12.63□□□□□ -0.39
RAB5C-201ENST00000346213 CT45A7P0DMV0 189 aa12.63□□□□□ -0.39
RAB5C-201ENST00000346213 NKX2-1P43699 371 aaPredicted RBP12.63□□□□□ -0.39
RAB5C-201ENST00000346213 GPR12P47775 334 aa12.63□□□□□ -0.39
RAB5C-201ENST00000346213 P2RY1P47900 373 aa12.63□□□□□ -0.39
RAB5C-201ENST00000346213 ALKAL2Q6UX46 152 aa12.63□□□□□ -0.39
RAB5C-201ENST00000346213 OR2T10Q8NGZ9 312 aa12.63□□□□□ -0.39
RAB5C-201ENST00000346213 GPR146Q96CH1 333 aa12.63□□□□□ -0.39
RAB5C-201ENST00000346213 PHYHIPLQ96FC7 376 aa12.63□□□□□ -0.39
RAB5C-201ENST00000346213 CYTL1Q9NRR1 136 aa12.63□□□□□ -0.39
RAB5C-201ENST00000346213 SDHAF2Q9NX18 166 aa12.63□□□□□ -0.39
RAB5C-201ENST00000346213 NCBP2LA6PVI3 153 aaKnown RBP12.62□□□□□ -0.39
RAB5C-201ENST00000346213 TAAR5O14804 337 aa12.62□□□□□ -0.39
RAB5C-201ENST00000346213 PITX3O75364 302 aa12.62□□□□□ -0.39
RAB5C-201ENST00000346213 PRB2P02812 416 aaPredicted RBP12.62□□□□□ -0.39
RAB5C-201ENST00000346213 IL3RAP26951 378 aa12.62□□□□□ -0.39
RAB5C-201ENST00000346213 RPL30P62888 115 aaKnown RBP12.62□□□□□ -0.39
RAB5C-201ENST00000346213 NDPQ00604 133 aa12.62□□□□□ -0.39
RAB5C-201ENST00000346213 ID3Q02535 119 aa12.62□□□□□ -0.39
RAB5C-201ENST00000346213 SAMD5Q5TGI4 173 aa12.62□□□□□ -0.39
RAB5C-201ENST00000346213 CENPVQ7Z7K6 275 aaPredicted RBP12.62□□□□□ -0.39
RAB5C-201ENST00000346213 DMBX1Q8NFW5 382 aa12.62□□□□□ -0.39
RAB5C-201ENST00000346213 R3HDM4Q96D70 268 aa12.62□□□□□ -0.39
RAB5C-201ENST00000346213 HSD17B10Q99714 261 aaKnown RBP12.62□□□□□ -0.39
RAB5C-201ENST00000346213 C11orf1Q9H5F2 150 aa12.62□□□□□ -0.39
RAB5C-201ENST00000346213 GAB2Q9UQC2 676 aa12.62□□□□□ -0.39
RAB5C-201ENST00000346213 RCL1Q9Y2P8 373 aaKnown RBP12.62□□□□□ -0.39
RAB5C-201ENST00000346213 A0A0G2JRQ6 117 aa12.61□□□□□ -0.39
RAB5C-201ENST00000346213 M0QZK8 103 aa12.61□□□□□ -0.39
RAB5C-201ENST00000346213 CFHR3Q02985 330 aa12.61□□□□□ -0.39
RAB5C-201ENST00000346213 TGP01266 2768 aa12.61□□□□□ -0.39
RAB5C-201ENST00000346213 IGKV1-5P01602 117 aa12.61□□□□□ -0.39
RAB5C-201ENST00000346213 LPAR6P43657 344 aa12.61□□□□□ -0.39
RAB5C-201ENST00000346213 BEAN1Q3B7T3 259 aa12.61□□□□□ -0.39
RAB5C-201ENST00000346213 OXLD1Q5BKU9 147 aa12.61□□□□□ -0.39
RAB5C-201ENST00000346213 SLC35E3Q7Z769 313 aa12.61□□□□□ -0.39
RAB5C-201ENST00000346213 STPG2Q8N412 459 aa12.61□□□□□ -0.39
RAB5C-201ENST00000346213 LRRC20Q8TCA0 184 aa12.61□□□□□ -0.39
RAB5C-201ENST00000346213 ZC4H2Q9NQZ6 224 aa12.61□□□□□ -0.39
RAB5C-201ENST00000346213 FBXO7Q9Y3I1 522 aa12.61□□□□□ -0.39
RAB5C-201ENST00000346213 TCRBV4S1A1TA0A5B7 111 aa12.6□□□□□ -0.39
RAB5C-201ENST00000346213 PSMB11A5LHX3 300 aa12.6□□□□□ -0.39
RAB5C-201ENST00000346213 H0YJW9 148 aa12.6□□□□□ -0.39
RAB5C-201ENST00000346213 TPT1P13693 172 aaKnown RBP12.6□□□□□ -0.39
RAB5C-201ENST00000346213 PVALBP20472 110 aaPredicted RBP12.6□□□□□ -0.39
RAB5C-201ENST00000346213 CXorf66Q5JRM2 361 aaPredicted RBP12.6□□□□□ -0.39
RAB5C-201ENST00000346213 RNASE11Q8TAA1 199 aaKnown RBP12.6□□□□□ -0.39
RAB5C-201ENST00000346213 TCTEX1D2Q8WW35 142 aa12.6□□□□□ -0.39
RAB5C-201ENST00000346213 TXNL1O43396 289 aa12.59□□□□□ -0.39
RAB5C-201ENST00000346213 ATG12O94817 140 aa12.59□□□□□ -0.39
RAB5C-201ENST00000346213 AKR1C2P52895 323 aa12.59□□□□□ -0.39
RAB5C-201ENST00000346213 BRWD1-AS2P59051 145 aa12.59□□□□□ -0.39
RAB5C-201ENST00000346213 POLR2GP62487 172 aaKnown RBP eCLIP12.59□□□□□ -0.39
RAB5C-201ENST00000346213 BAP18Q8IXM2 172 aa12.59□□□□□ -0.39
RAB5C-201ENST00000346213 SPAG16Q8N0X2 631 aa12.59□□□□□ -0.39
RAB5C-201ENST00000346213 ZNF383Q8NA42 475 aa12.59□□□□□ -0.39
RAB5C-201ENST00000346213 CITED4Q96RK1 184 aa12.59□□□□□ -0.39
RAB5C-201ENST00000346213 SLC25A32Q9H2D1 315 aa12.59□□□□□ -0.39
RAB5C-201ENST00000346213 LINC00473A8K010 186 aa12.58□□□□□ -0.4
RAB5C-201ENST00000346213 NMBP08949 121 aa12.58□□□□□ -0.4
RAB5C-201ENST00000346213 DUTP33316 252 aaKnown RBP12.58□□□□□ -0.4
RAB5C-201ENST00000346213 EIF5AP63241 154 aaKnown RBP12.58□□□□□ -0.4
RAB5C-201ENST00000346213 MMDQ15546 238 aa12.58□□□□□ -0.4
RAB5C-201ENST00000346213 Q6ZRM9 215 aa12.58□□□□□ -0.4
RAB5C-201ENST00000346213 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.58□□□□□ -0.4
RAB5C-201ENST00000346213 CD300LFQ8TDQ1 290 aa12.58□□□□□ -0.4
RAB5C-201ENST00000346213 DUX3Q96PT4 197 aa12.58□□□□□ -0.4
RAB5C-201ENST00000346213 TPSG1Q9NRR2 321 aa12.58□□□□□ -0.4
RAB5C-201ENST00000346213 COA4Q9NYJ1 87 aa12.58□□□□□ -0.4
RAB5C-201ENST00000346213 PLXNB1O43157 2135 aa12.58□□□□□ -0.4
RAB5C-201ENST00000346213 IGHV7-81A0A0B4J1V7 117 aa12.57□□□□□ -0.4
RAB5C-201ENST00000346213 FCN1O00602 326 aa12.57□□□□□ -0.4
RAB5C-201ENST00000346213 RAMP3O60896 148 aa12.57□□□□□ -0.4
RAB5C-201ENST00000346213 NDUFA3O95167 84 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms