RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 APOHP02749 345 aaPredicted RBP16.59■□□□□ 0.25
HDAC4-201ENST00000345617 SCTP09683 121 aa16.59■□□□□ 0.25
HDAC4-201ENST00000345617 MAGEA5P43359 124 aa16.59■□□□□ 0.25
HDAC4-201ENST00000345617 NABP2Q9BQ15 211 aa16.59■□□□□ 0.25
HDAC4-201ENST00000345617 ORMDL2Q53FV1 153 aa16.59■□□□□ 0.25
HDAC4-201ENST00000345617 KLK15Q9H2R5 256 aa16.59■□□□□ 0.25
HDAC4-201ENST00000345617 IGKV3-7A0A075B6H7 116 aa16.59■□□□□ 0.25
HDAC4-201ENST00000345617 HIGD1CA8MV81 97 aa16.59■□□□□ 0.25
HDAC4-201ENST00000345617 ERVK11-1P61568 191 aa16.59■□□□□ 0.25
HDAC4-201ENST00000345617 OR11H4Q8NGC9 324 aa16.59■□□□□ 0.25
HDAC4-201ENST00000345617 PEX7O00628 323 aa16.58■□□□□ 0.25
HDAC4-201ENST00000345617 RND2P52198 227 aa16.58■□□□□ 0.25
HDAC4-201ENST00000345617 TMEM95Q3KNT9 176 aa16.58■□□□□ 0.25
HDAC4-201ENST00000345617 TMEM170AQ8WVE7 144 aa16.58■□□□□ 0.25
HDAC4-201ENST00000345617 ARRDC1-AS1Q9H2J1 176 aa16.58■□□□□ 0.25
HDAC4-201ENST00000345617 TMEM106BQ9NUM4 274 aa16.58■□□□□ 0.25
HDAC4-201ENST00000345617 FRMPD3Q5JV73 1810 aa16.58■□□□□ 0.25
HDAC4-201ENST00000345617 ATP5G2Q06055 141 aa16.58■□□□□ 0.24
HDAC4-201ENST00000345617 HSD52Q0P140 79 aa16.58■□□□□ 0.24
HDAC4-201ENST00000345617 HOXB3P14651 431 aaPredicted RBP16.58■□□□□ 0.24
HDAC4-201ENST00000345617 GAGE13Q4V321 117 aa16.58■□□□□ 0.24
HDAC4-201ENST00000345617 C1QL3Q5VWW1 255 aa16.58■□□□□ 0.24
HDAC4-201ENST00000345617 ZNF721Q8TF20 911 aa16.58■□□□□ 0.24
HDAC4-201ENST00000345617 SLC25A38Q96DW6 304 aa16.58■□□□□ 0.24
HDAC4-201ENST00000345617 SDF2L1Q9HCN8 221 aa16.58■□□□□ 0.24
HDAC4-201ENST00000345617 KLHDC2Q9Y2U9 406 aa16.58■□□□□ 0.24
HDAC4-201ENST00000345617 UNC119Q13432 240 aa16.58■□□□□ 0.24
HDAC4-201ENST00000345617 SNAI3Q3KNW1 292 aa16.58■□□□□ 0.24
HDAC4-201ENST00000345617 RNASEH2CQ8TDP1 164 aaKnown RBP16.58■□□□□ 0.24
HDAC4-201ENST00000345617 FOXQ1Q9C009 403 aa16.58■□□□□ 0.24
HDAC4-201ENST00000345617 UCP2P55851 309 aa16.57■□□□□ 0.24
HDAC4-201ENST00000345617 TSPAN7P41732 249 aa16.57■□□□□ 0.24
HDAC4-201ENST00000345617 UNQ9370/PRO34162Q6UXP9 181 aa16.57■□□□□ 0.24
HDAC4-201ENST00000345617 DENND4CQ5VZ89 1909 aa16.57■□□□□ 0.24
HDAC4-201ENST00000345617 TM4SF5O14894 197 aa16.57■□□□□ 0.24
HDAC4-201ENST00000345617 SOX8P57073 446 aa16.57■□□□□ 0.24
HDAC4-201ENST00000345617 CT55Q8WUE5 264 aa16.57■□□□□ 0.24
HDAC4-201ENST00000345617 SPG11Q96JI7 2443 aa16.57■□□□□ 0.24
HDAC4-201ENST00000345617 GGTLC3B5MD39 225 aa16.57■□□□□ 0.24
HDAC4-201ENST00000345617 LDLRAD2Q5SZI1 272 aa16.57■□□□□ 0.24
HDAC4-201ENST00000345617 CALYQ9NYX4 217 aa16.57■□□□□ 0.24
HDAC4-201ENST00000345617 TCF19Q9Y242 345 aa16.57■□□□□ 0.24
HDAC4-201ENST00000345617 ZNF585BQ52M93 769 aa16.57■□□□□ 0.24
HDAC4-201ENST00000345617 ZNF708P17019 499 aa16.56■□□□□ 0.24
HDAC4-201ENST00000345617 KCNK17Q96T54 332 aa16.56■□□□□ 0.24
HDAC4-201ENST00000345617 IGHV3OR15-7A0A075B7D8 119 aa16.56■□□□□ 0.24
HDAC4-201ENST00000345617 PAX2Q02962 417 aa16.56■□□□□ 0.24
HDAC4-201ENST00000345617 ATXN8Q156A1 80 aa16.56■□□□□ 0.24
HDAC4-201ENST00000345617 FAM74A4Q5TZK3 123 aa16.56■□□□□ 0.24
HDAC4-201ENST00000345617 PRR14LQ5THK1 2151 aa16.56■□□□□ 0.24
HDAC4-201ENST00000345617 DPM2O94777 84 aa16.56■□□□□ 0.24
HDAC4-201ENST00000345617 DTX1Q86Y01 620 aa16.56■□□□□ 0.24
HDAC4-201ENST00000345617 NPPCP23582 126 aa16.55■□□□□ 0.24
HDAC4-201ENST00000345617 FOXC2Q99958 501 aa16.55■□□□□ 0.24
HDAC4-201ENST00000345617 MEGF9Q9H1U4 602 aa16.55■□□□□ 0.24
HDAC4-201ENST00000345617 ZNF818PQ6ZRF7 136 aa16.55■□□□□ 0.24
HDAC4-201ENST00000345617 SORL1Q92673 2214 aa16.55■□□□□ 0.24
HDAC4-201ENST00000345617 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.55■□□□□ 0.24
HDAC4-201ENST00000345617 TMEM238C9JI98 176 aa16.55■□□□□ 0.24
HDAC4-201ENST00000345617 REG1BP48304 166 aa16.55■□□□□ 0.24
HDAC4-201ENST00000345617 NXPH1P58417 271 aa16.55■□□□□ 0.24
HDAC4-201ENST00000345617 OR5AN1Q8NGI8 311 aa16.55■□□□□ 0.24
HDAC4-201ENST00000345617 NRN1Q9NPD7 142 aa16.55■□□□□ 0.24
HDAC4-201ENST00000345617 GPR6P46095 362 aaPredicted RBP16.55■□□□□ 0.24
HDAC4-201ENST00000345617 Q5PR19 223 aa16.55■□□□□ 0.24
HDAC4-201ENST00000345617 ORAOV1Q8WV07 137 aa16.55■□□□□ 0.24
HDAC4-201ENST00000345617 HIST1H2BKO60814 126 aa16.55■□□□□ 0.24
HDAC4-201ENST00000345617 HIST1H2BJP06899 126 aa16.55■□□□□ 0.24
HDAC4-201ENST00000345617 HIST1H2BOP23527 126 aa16.55■□□□□ 0.24
HDAC4-201ENST00000345617 HIST1H2BBP33778 126 aa16.55■□□□□ 0.24
HDAC4-201ENST00000345617 HIST1H2BDP58876 126 aa16.55■□□□□ 0.24
HDAC4-201ENST00000345617 HIST1H2BCP62807 126 aa16.55■□□□□ 0.24
HDAC4-201ENST00000345617 HIST2H2BEQ16778 126 aa16.55■□□□□ 0.24
HDAC4-201ENST00000345617 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.55■□□□□ 0.24
HDAC4-201ENST00000345617 TMEM86BQ8N661 226 aa16.55■□□□□ 0.24
HDAC4-201ENST00000345617 HIST1H2BHQ93079 126 aa16.55■□□□□ 0.24
HDAC4-201ENST00000345617 HIST1H2BNQ99877 126 aa16.55■□□□□ 0.24
HDAC4-201ENST00000345617 HIST1H2BMQ99879 126 aa16.55■□□□□ 0.24
HDAC4-201ENST00000345617 AGRNO00468 2067 aa16.54■□□□□ 0.24
HDAC4-201ENST00000345617 KIAA1644Q3SXP7 199 aa16.54■□□□□ 0.24
HDAC4-201ENST00000345617 ASCL2Q99929 193 aa16.54■□□□□ 0.24
HDAC4-201ENST00000345617 H3BUT2 72 aa16.54■□□□□ 0.24
HDAC4-201ENST00000345617 RNFT1Q5M7Z0 435 aa16.54■□□□□ 0.24
HDAC4-201ENST00000345617 KIAA1549Q9HCM3 1950 aa16.54■□□□□ 0.24
HDAC4-201ENST00000345617 WISP3O95389 354 aaPredicted RBP16.54■□□□□ 0.24
HDAC4-201ENST00000345617 IDI2-AS1Q9NZ38 188 aa16.54■□□□□ 0.24
HDAC4-201ENST00000345617 HOXA3O43365 443 aaPredicted RBP16.54■□□□□ 0.24
HDAC4-201ENST00000345617 UPK3AO75631 287 aa16.54■□□□□ 0.24
HDAC4-201ENST00000345617 UCN2Q96RP3 112 aa16.54■□□□□ 0.24
HDAC4-201ENST00000345617 HBDP02042 147 aa16.54■□□□□ 0.24
HDAC4-201ENST00000345617 CRPP02741 224 aa16.54■□□□□ 0.24
HDAC4-201ENST00000345617 SAMD5Q5TGI4 173 aa16.54■□□□□ 0.24
HDAC4-201ENST00000345617 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.53■□□□□ 0.24
HDAC4-201ENST00000345617 A0A1W2PRS3 328 aa16.53■□□□□ 0.24
HDAC4-201ENST00000345617 NPIPB11E5RHQ5 1161 aa16.53■□□□□ 0.24
HDAC4-201ENST00000345617 HCP5Q6MZN7 132 aa16.53■□□□□ 0.24
HDAC4-201ENST00000345617 CLEC7AQ9BXN2 247 aa16.53■□□□□ 0.24
HDAC4-201ENST00000345617 OSR1Q8TAX0 266 aaPredicted RBP16.53■□□□□ 0.24
HDAC4-201ENST00000345617 LHX8Q68G74 356 aa16.53■□□□□ 0.24
HDAC4-201ENST00000345617 DRD3P35462 400 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms