RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 CALYQ9NYX4 217 aa10.24□□□□□ -0.77
COL12A1-202ENST00000345356 REG1AP05451 166 aa10.23□□□□□ -0.77
COL12A1-202ENST00000345356 CX3CL1P78423 397 aa10.23□□□□□ -0.77
COL12A1-202ENST00000345356 GAGE1Q13065 139 aa10.23□□□□□ -0.77
COL12A1-202ENST00000345356 PRSS8Q16651 343 aa10.23□□□□□ -0.77
COL12A1-202ENST00000345356 hDV102S1A0JD36 115 aa10.23□□□□□ -0.77
COL12A1-202ENST00000345356 IGHV4-34P06331 123 aa10.23□□□□□ -0.77
COL12A1-202ENST00000345356 DEPPQ9NTK1 212 aa10.23□□□□□ -0.77
COL12A1-202ENST00000345356 A0A1W2PRE2 83 aa10.23□□□□□ -0.77
COL12A1-202ENST00000345356 TMEM262E9PQX1 116 aa10.23□□□□□ -0.77
COL12A1-202ENST00000345356 SRFP11831 508 aa10.23□□□□□ -0.77
COL12A1-202ENST00000345356 FAM89BQ8N5H3 189 aa10.23□□□□□ -0.77
COL12A1-202ENST00000345356 CHODLQ9H9P2 273 aa10.23□□□□□ -0.77
COL12A1-202ENST00000345356 JPT1Q9UK76 154 aa10.23□□□□□ -0.77
COL12A1-202ENST00000345356 KLF2Q9Y5W3 355 aaPredicted RBP10.23□□□□□ -0.77
COL12A1-202ENST00000345356 UCP2P55851 309 aa10.23□□□□□ -0.77
COL12A1-202ENST00000345356 CACNG7P62955 275 aa10.23□□□□□ -0.77
COL12A1-202ENST00000345356 PAX2Q02962 417 aa10.23□□□□□ -0.77
COL12A1-202ENST00000345356 ORMDL3Q8N138 153 aa10.23□□□□□ -0.77
COL12A1-202ENST00000345356 OR4C13Q8NGP0 309 aa10.23□□□□□ -0.77
COL12A1-202ENST00000345356 CHCHD1Q96BP2 118 aaKnown RBP10.23□□□□□ -0.77
COL12A1-202ENST00000345356 ZNF638Q14966 1978 aaKnown RBP10.23□□□□□ -0.77
COL12A1-202ENST00000345356 NDUFA3O95167 84 aa10.23□□□□□ -0.77
COL12A1-202ENST00000345356 DEFB109BQ30KR1 87 aa10.23□□□□□ -0.77
COL12A1-202ENST00000345356 C10orf91Q5T1B1 145 aa10.23□□□□□ -0.77
COL12A1-202ENST00000345356 C10orf128Q5T292 105 aa10.23□□□□□ -0.77
COL12A1-202ENST00000345356 OR4A5Q8NH83 315 aa10.23□□□□□ -0.77
COL12A1-202ENST00000345356 SLC25A10Q9UBX3 287 aaPredicted RBP10.23□□□□□ -0.77
COL12A1-202ENST00000345356 STRCQ7RTU9 1775 aa10.22□□□□□ -0.77
COL12A1-202ENST00000345356 TRIP12Q14669 1992 aaPredicted RBP10.22□□□□□ -0.77
COL12A1-202ENST00000345356 IGHV1OR15-9A0A0B4J2B8 117 aa10.22□□□□□ -0.77
COL12A1-202ENST00000345356 SELLP14151 372 aa10.22□□□□□ -0.77
COL12A1-202ENST00000345356 GATA2P23769 480 aaPredicted RBP10.22□□□□□ -0.77
COL12A1-202ENST00000345356 CCL13Q99616 98 aa10.22□□□□□ -0.77
COL12A1-202ENST00000345356 IGKV1-9A0A0C4DH69 117 aa10.22□□□□□ -0.77
COL12A1-202ENST00000345356 TMEM170BQ5T4T1 132 aa10.22□□□□□ -0.77
COL12A1-202ENST00000345356 ZFAND6Q6FIF0 208 aa10.22□□□□□ -0.77
COL12A1-202ENST00000345356 FAM53AQ6NSI3 398 aaPredicted RBP10.22□□□□□ -0.77
COL12A1-202ENST00000345356 GLI3P10071 1580 aa10.22□□□□□ -0.77
COL12A1-202ENST00000345356 LYL1P12980 280 aa10.22□□□□□ -0.77
COL12A1-202ENST00000345356 RPL39P5Q59GN2 51 aa10.22□□□□□ -0.77
COL12A1-202ENST00000345356 AGMATQ9BSE5 352 aa10.22□□□□□ -0.77
COL12A1-202ENST00000345356 KBTBD11-OT1A0A1B0GTJ5 212 aa10.22□□□□□ -0.77
COL12A1-202ENST00000345356 IGLV3-21P80748 117 aaPredicted RBP10.22□□□□□ -0.77
COL12A1-202ENST00000345356 TMEM95Q3KNT9 176 aa10.22□□□□□ -0.77
COL12A1-202ENST00000345356 FMC1Q96HJ9 113 aa10.22□□□□□ -0.77
COL12A1-202ENST00000345356 MRPS16Q9Y3D3 137 aaKnown RBP10.22□□□□□ -0.77
COL12A1-202ENST00000345356 TRAV17A0A0B4J275 112 aa10.21□□□□□ -0.77
COL12A1-202ENST00000345356 hCG_38984A0A1B0GV85 526 aa10.21□□□□□ -0.77
COL12A1-202ENST00000345356 C2CD4DB7Z1M9 353 aa10.21□□□□□ -0.77
COL12A1-202ENST00000345356 PSG9Q00887 426 aa10.21□□□□□ -0.77
COL12A1-202ENST00000345356 ZNF585BQ52M93 769 aa10.21□□□□□ -0.77
COL12A1-202ENST00000345356 TMEM54Q969K7 222 aa10.21□□□□□ -0.77
COL12A1-202ENST00000345356 PHLDA3Q9Y5J5 127 aa10.21□□□□□ -0.77
COL12A1-202ENST00000345356 CACNA1DQ01668 2161 aa10.21□□□□□ -0.77
COL12A1-202ENST00000345356 A0A1B0GW15 77 aa10.21□□□□□ -0.77
COL12A1-202ENST00000345356 PPIHO43447 177 aaKnown RBP10.21□□□□□ -0.77
COL12A1-202ENST00000345356 HGFACQ04756 655 aa10.21□□□□□ -0.77
COL12A1-202ENST00000345356 IFI27L2Q9H2X8 130 aa10.21□□□□□ -0.77
COL12A1-202ENST00000345356 SCN8AQ9UQD0 1980 aa10.21□□□□□ -0.77
COL12A1-202ENST00000345356 KIAA0100Q14667 2235 aaKnown RBP10.21□□□□□ -0.78
COL12A1-202ENST00000345356 GPX1P07203 203 aa10.21□□□□□ -0.78
COL12A1-202ENST00000345356 FAM90A2PQ658T7 463 aa10.21□□□□□ -0.78
COL12A1-202ENST00000345356 OR5P3Q8WZ94 311 aa10.21□□□□□ -0.78
COL12A1-202ENST00000345356 GPR82Q96P67 336 aa10.21□□□□□ -0.78
COL12A1-202ENST00000345356 C12orf77C9JDV5 145 aa10.21□□□□□ -0.78
COL12A1-202ENST00000345356 CDKN1AP38936 164 aa10.21□□□□□ -0.78
COL12A1-202ENST00000345356 GAGE2BQ13066 116 aa10.21□□□□□ -0.78
COL12A1-202ENST00000345356 GAGE2EQ4V326 116 aa10.21□□□□□ -0.78
COL12A1-202ENST00000345356 PEAR1Q5VY43 1037 aaPredicted RBP10.21□□□□□ -0.78
COL12A1-202ENST00000345356 BMPERQ8N8U9 685 aa10.21□□□□□ -0.78
COL12A1-202ENST00000345356 GAGE2DQ9UEU5 116 aa10.21□□□□□ -0.78
COL12A1-202ENST00000345356 MYO16Q9Y6X6 1858 aa10.21□□□□□ -0.78
COL12A1-202ENST00000345356 MC5RP33032 325 aa10.2□□□□□ -0.78
COL12A1-202ENST00000345356 PTGDSP41222 190 aa10.2□□□□□ -0.78
COL12A1-202ENST00000345356 ATP5IP56385 69 aaPredicted RBP10.2□□□□□ -0.78
COL12A1-202ENST00000345356 OR9G4Q8NGQ1 327 aa10.2□□□□□ -0.78
COL12A1-202ENST00000345356 AHDC1Q5TGY3 1603 aaPredicted RBP10.2□□□□□ -0.78
COL12A1-202ENST00000345356 CELA2AP08217 269 aa10.2□□□□□ -0.78
COL12A1-202ENST00000345356 TDGF1P13385 188 aa10.2□□□□□ -0.78
COL12A1-202ENST00000345356 LEPP41159 167 aa10.2□□□□□ -0.78
COL12A1-202ENST00000345356 RPP25LQ8N5L8 163 aaKnown RBP10.2□□□□□ -0.78
COL12A1-202ENST00000345356 HOXA3O43365 443 aaPredicted RBP10.2□□□□□ -0.78
COL12A1-202ENST00000345356 CD5LO43866 347 aa10.2□□□□□ -0.78
COL12A1-202ENST00000345356 HBDP02042 147 aa10.2□□□□□ -0.78
COL12A1-202ENST00000345356 MESP1Q9BRJ9 268 aa10.2□□□□□ -0.78
COL12A1-202ENST00000345356 PHF7Q9BWX1 381 aaPredicted RBP10.2□□□□□ -0.78
COL12A1-202ENST00000345356 SCN2AQ99250 2005 aa10.2□□□□□ -0.78
COL12A1-202ENST00000345356 LOXL3P58215 753 aa10.2□□□□□ -0.78
COL12A1-202ENST00000345356 GNG5P63218 68 aa10.2□□□□□ -0.78
COL12A1-202ENST00000345356 TMEM171Q8WVE6 324 aa10.2□□□□□ -0.78
COL12A1-202ENST00000345356 SCGB3A1Q96QR1 104 aa10.2□□□□□ -0.78
COL12A1-202ENST00000345356 GP6Q9HCN6 339 aa10.2□□□□□ -0.78
COL12A1-202ENST00000345356 TFF2Q03403 129 aa10.2□□□□□ -0.78
COL12A1-202ENST00000345356 ZNF441Q8N8Z8 693 aa10.2□□□□□ -0.78
COL12A1-202ENST00000345356 ZNF576Q9H609 170 aa10.2□□□□□ -0.78
COL12A1-202ENST00000345356 A0A1B0GUS0 222 aa10.19□□□□□ -0.78
COL12A1-202ENST00000345356 SRXN1Q9BYN0 137 aa10.19□□□□□ -0.78
COL12A1-202ENST00000345356 IDI2-AS1Q9NZ38 188 aa10.19□□□□□ -0.78
COL12A1-202ENST00000345356 GBF1Q92538 1859 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms