RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 XAF1Q6GPH4 301 aa15.15■□□□□ 0.02
SMAD4-201ENST00000342988 RSPO3Q9BXY4 272 aaPredicted RBP15.15■□□□□ 0.02
SMAD4-201ENST00000342988 EPDR1Q9UM22 224 aa15.15■□□□□ 0.02
SMAD4-201ENST00000342988 INSL4Q14641 139 aa15.15■□□□□ 0.02
SMAD4-201ENST00000342988 HMGCLL1Q8TB92 370 aa15.15■□□□□ 0.02
SMAD4-201ENST00000342988 TMEM186Q96B77 213 aa15.15■□□□□ 0.02
SMAD4-201ENST00000342988 HTN3P15516 51 aa15.15■□□□□ 0.02
SMAD4-201ENST00000342988 FOXB2Q5VYV0 432 aa15.15■□□□□ 0.02
SMAD4-201ENST00000342988 RPP21Q9H633 154 aaKnown RBP15.15■□□□□ 0.02
SMAD4-201ENST00000342988 TAF1LQ8IZX4 1826 aa15.15■□□□□ 0.02
SMAD4-201ENST00000342988 SPTY2D1-AS1A0A0U1RR47 76 aa15.15■□□□□ 0.02
SMAD4-201ENST00000342988 CCL4L1Q8NHW4 92 aa15.15■□□□□ 0.02
SMAD4-201ENST00000342988 GPR146Q96CH1 333 aa15.15■□□□□ 0.02
SMAD4-201ENST00000342988 PRADC1Q9BSG0 188 aa15.15■□□□□ 0.02
SMAD4-201ENST00000342988 OCIAD2Q56VL3 154 aa15.14■□□□□ 0.01
SMAD4-201ENST00000342988 C17orf47Q8NEP4 570 aa15.14■□□□□ 0.01
SMAD4-201ENST00000342988 IDI2-AS1Q9NZ38 188 aa15.14■□□□□ 0.01
SMAD4-201ENST00000342988 TRGV3P03979 118 aa15.14■□□□□ 0.01
SMAD4-201ENST00000342988 TMEM167AQ8TBQ9 72 aa15.14■□□□□ 0.01
SMAD4-201ENST00000342988 JMJD8Q96S16 334 aa15.14■□□□□ 0.01
SMAD4-201ENST00000342988 HS3ST3B1Q9Y662 390 aa15.14■□□□□ 0.01
SMAD4-201ENST00000342988 PRRC2AP48634 2157 aaKnown RBP15.14■□□□□ 0.01
SMAD4-201ENST00000342988 ZFP36L2P47974 494 aaKnown RBP15.14■□□□□ 0.01
SMAD4-201ENST00000342988 UBR3Q6ZT12 1888 aa15.14■□□□□ 0.01
SMAD4-201ENST00000342988 ZNF784Q8NCA9 323 aaPredicted RBP15.14■□□□□ 0.01
SMAD4-201ENST00000342988 C2orf16Q68DN1 1984 aa15.14■□□□□ 0.01
SMAD4-201ENST00000342988 CD28P10747 220 aa15.14■□□□□ 0.01
SMAD4-201ENST00000342988 PLSCR4Q9NRQ2 329 aa15.14■□□□□ 0.01
SMAD4-201ENST00000342988 GFRA3O60609 400 aa15.14■□□□□ 0.01
SMAD4-201ENST00000342988 CHTOPQ9Y3Y2 248 aaKnown RBP15.14■□□□□ 0.01
SMAD4-201ENST00000342988 F12P00748 615 aaPredicted RBP15.14■□□□□ 0.01
SMAD4-201ENST00000342988 MAGEA5P43359 124 aa15.14■□□□□ 0.01
SMAD4-201ENST00000342988 HSPE1P61604 102 aaKnown RBP15.14■□□□□ 0.01
SMAD4-201ENST00000342988 MAFAQ8NHW3 353 aaPredicted RBP15.14■□□□□ 0.01
SMAD4-201ENST00000342988 PLXNA2O75051 1894 aa15.14■□□□□ 0.01
SMAD4-201ENST00000342988 DMKNQ6E0U4 476 aaPredicted RBP15.13■□□□□ 0.01
SMAD4-201ENST00000342988 GATAD1Q8WUU5 269 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 TRAV5A0A0B4J249 113 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 SP9P0CG40 484 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 SMIM8Q96KF7 97 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 DSCAML1Q8TD84 2053 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 PAX4O43316 350 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 ATP5J2P56134 94 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 RTN4RL2Q86UN3 420 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 LHX9Q9NQ69 397 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 TRGV4A0A0C4DH28 118 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 VEGFBP49765 207 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 PMVKQ15126 192 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 PDFQ9HBH1 243 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 CEACAM5P06731 702 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 C9orf153Q5TBE3 101 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 CT55Q8WUE5 264 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 FAM90A10PA6NDY2 464 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 FAM90A18PA6NE21 464 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 FAM90A16PA6NEW6 464 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 FAM90A20PA6NIJ5 464 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 FAM90A8PA6NJQ4 464 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 FAM90A7PA6NKC0 464 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 FAM90A22PA8MWA6 464 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 FAM90A12PA8MX19 464 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 FAM90A5PA8MXJ8 464 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 FAM90A23PA8MXZ1 464 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 FAM90A15PP0C7V4 464 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 FAM90A13PP0C7W8 464 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 FAM90A14PP0C7W9 464 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 FAM90A24PP0C7X0 464 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 DANCRP0C864 163 aa15.13■□□□□ 0.01
SMAD4-201ENST00000342988 LOC102723996A0A087X1L8 192 aa15.12■□□□□ 0.01
SMAD4-201ENST00000342988 HIGD1CA8MV81 97 aa15.12■□□□□ 0.01
SMAD4-201ENST00000342988 C2orf82Q6UX34 121 aa15.12■□□□□ 0.01
SMAD4-201ENST00000342988 PAQR9Q6ZVX9 377 aa15.12■□□□□ 0.01
SMAD4-201ENST00000342988 STRCP1A6NGW2 1772 aa15.12■□□□□ 0.01
SMAD4-201ENST00000342988 DRAM1Q8N682 238 aa15.12■□□□□ 0.01
SMAD4-201ENST00000342988 PRRT4C9JH25 899 aa15.12■□□□□ 0.01
SMAD4-201ENST00000342988 IGKCP01834 107 aa15.12■□□□□ 0.01
SMAD4-201ENST00000342988 CD7P09564 240 aa15.12■□□□□ 0.01
SMAD4-201ENST00000342988 REG1AP05451 166 aa15.12■□□□□ 0.01
SMAD4-201ENST00000342988 MDKP21741 143 aaPredicted RBP15.12■□□□□ 0.01
SMAD4-201ENST00000342988 LDLRAD2Q5SZI1 272 aa15.12■□□□□ 0.01
SMAD4-201ENST00000342988 F2Z2F3 143 aa15.12■□□□□ 0.01
SMAD4-201ENST00000342988 GZMBP10144 247 aa15.12■□□□□ 0.01
SMAD4-201ENST00000342988 ICAM4Q14773 271 aa15.12■□□□□ 0.01
SMAD4-201ENST00000342988 HSD52Q0P140 79 aa15.11■□□□□ 0.01
SMAD4-201ENST00000342988 MESP2Q0VG99 397 aa15.11■□□□□ 0.01
SMAD4-201ENST00000342988 FIZ1Q96SL8 496 aa15.11■□□□□ 0.01
SMAD4-201ENST00000342988 TRAV41A0A0B4J266 112 aa15.11■□□□□ 0.01
SMAD4-201ENST00000342988 CYP2G1PQ6ZSU1 146 aa15.11■□□□□ 0.01
SMAD4-201ENST00000342988 RUNX1Q01196 453 aa15.11■□□□□ 0.01
SMAD4-201ENST00000342988 ISXQ2M1V0 245 aa15.11■□□□□ 0.01
SMAD4-201ENST00000342988 C1orf210Q8IVY1 113 aa15.11■□□□□ 0.01
SMAD4-201ENST00000342988 PPIAL4CA0A0B4J2A2 164 aa15.11■□□□□ 0.01
SMAD4-201ENST00000342988 METTL12A8MUP2 240 aa15.11■□□□□ 0.01
SMAD4-201ENST00000342988 PPIAL4GP0DN37 164 aa15.11■□□□□ 0.01
SMAD4-201ENST00000342988 FGFRL1Q8N441 504 aa15.11■□□□□ 0.01
SMAD4-201ENST00000342988 SMPXQ9UHP9 88 aa15.11■□□□□ 0.01
SMAD4-201ENST00000342988 LAMTOR2Q9Y2Q5 125 aa15.11■□□□□ 0.01
SMAD4-201ENST00000342988 BCORQ6W2J9 1755 aa15.11■□□□□ 0.01
SMAD4-201ENST00000342988 IZUMO1RA6ND01 250 aa15.11■□□□□ 0.01
SMAD4-201ENST00000342988 CHCHD1Q96BP2 118 aaKnown RBP15.11■□□□□ 0.01
SMAD4-201ENST00000342988 CMC4P56277 68 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms