RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 MOSP00540 346 aa12.45□□□□□ -0.42
RRP1B-201ENST00000340648 HLA-DRB1P01911 266 aa12.45□□□□□ -0.42
RRP1B-201ENST00000340648 FOXG1P55316 489 aaPredicted RBP12.45□□□□□ -0.42
RRP1B-201ENST00000340648 MMDQ15546 238 aa12.45□□□□□ -0.42
RRP1B-201ENST00000340648 GTF3AQ92664 365 aaKnown RBP12.45□□□□□ -0.42
RRP1B-201ENST00000340648 C19orf24Q9BVV8 132 aa12.45□□□□□ -0.42
RRP1B-201ENST00000340648 HSPB7Q9UBY9 170 aa12.45□□□□□ -0.42
RRP1B-201ENST00000340648 A0A0G2JRQ6 117 aa12.45□□□□□ -0.42
RRP1B-201ENST00000340648 ZNF207O43670 478 aaKnown RBP12.45□□□□□ -0.42
RRP1B-201ENST00000340648 CLDN18P56856 261 aa12.45□□□□□ -0.42
RRP1B-201ENST00000340648 NUTF2P61970 127 aaKnown RBP12.45□□□□□ -0.42
RRP1B-201ENST00000340648 TMEM256Q8N2U0 113 aa12.45□□□□□ -0.42
RRP1B-201ENST00000340648 SRSF12Q8WXF0 261 aaKnown RBP12.45□□□□□ -0.42
RRP1B-201ENST00000340648 DERL1Q9BUN8 251 aa12.45□□□□□ -0.42
RRP1B-201ENST00000340648 LAMTOR2Q9Y2Q5 125 aa12.45□□□□□ -0.42
RRP1B-201ENST00000340648 ZNF664Q8N3J9 261 aa12.45□□□□□ -0.42
RRP1B-201ENST00000340648 MRPL32Q9BYC8 188 aaKnown RBP12.45□□□□□ -0.42
RRP1B-201ENST00000340648 IGHV2-70P01814 119 aa12.45□□□□□ -0.42
RRP1B-201ENST00000340648 J3QW42 95 aa12.44□□□□□ -0.42
RRP1B-201ENST00000340648 RBFOX2O43251 390 aaKnown RBP eCLIP12.44□□□□□ -0.422e-13■■□□□ 14.1
RRP1B-201ENST00000340648 HBBP68871 147 aa12.44□□□□□ -0.42
RRP1B-201ENST00000340648 TEX38Q6PEX7 206 aa12.44□□□□□ -0.42
RRP1B-201ENST00000340648 J3KRW8 73 aa12.44□□□□□ -0.42
RRP1B-201ENST00000340648 TWIST1Q15672 202 aa12.44□□□□□ -0.42
RRP1B-201ENST00000340648 FAM201AQ5SY85 155 aa12.44□□□□□ -0.42
RRP1B-201ENST00000340648 TRAV9-1A0A075B6T8 112 aa12.44□□□□□ -0.42
RRP1B-201ENST00000340648 PRR33A8MZF0 331 aa12.44□□□□□ -0.42
RRP1B-201ENST00000340648 IFNL4K9M1U5 179 aa12.44□□□□□ -0.42
RRP1B-201ENST00000340648 PEAR1Q5VY43 1037 aaPredicted RBP12.44□□□□□ -0.42
RRP1B-201ENST00000340648 C1orf174Q8IYL3 243 aa12.44□□□□□ -0.42
RRP1B-201ENST00000340648 GRAMD2BQ96HH9 432 aa12.44□□□□□ -0.42
RRP1B-201ENST00000340648 PLXNA2O75051 1894 aa12.44□□□□□ -0.42
RRP1B-201ENST00000340648 TMEM189A5PLL7 270 aa12.44□□□□□ -0.42
RRP1B-201ENST00000340648 CEACAM3P40198 252 aa12.44□□□□□ -0.42
RRP1B-201ENST00000340648 HOXA4Q00056 320 aaPredicted RBP12.44□□□□□ -0.42
RRP1B-201ENST00000340648 EAF1Q96JC9 268 aaPredicted RBP12.44□□□□□ -0.42
RRP1B-201ENST00000340648 LOC102723996A0A087X1L8 192 aa12.43□□□□□ -0.42
RRP1B-201ENST00000340648 GZMBP10144 247 aa12.43□□□□□ -0.42
RRP1B-201ENST00000340648 LINC00305Q7Z4B0 112 aa12.43□□□□□ -0.42
RRP1B-201ENST00000340648 SCNM1Q9BWG6 230 aa12.43□□□□□ -0.42
RRP1B-201ENST00000340648 HELZP42694 1942 aaKnown RBP12.43□□□□□ -0.42
RRP1B-201ENST00000340648 IGHV2-5P01817 119 aa12.43□□□□□ -0.42
RRP1B-201ENST00000340648 ANAPC10Q9UM13 185 aa12.43□□□□□ -0.42
RRP1B-201ENST00000340648 WDR83OSQ9Y284 106 aa12.43□□□□□ -0.42
RRP1B-201ENST00000340648 OR2T8A6NH00 312 aa12.43□□□□□ -0.42
RRP1B-201ENST00000340648 CA7P43166 264 aa12.43□□□□□ -0.42
RRP1B-201ENST00000340648 TBR1Q16650 682 aa12.43□□□□□ -0.42
RRP1B-201ENST00000340648 LINC01551Q86U37 167 aa12.43□□□□□ -0.42
RRP1B-201ENST00000340648 NKX2-8O15522 239 aa12.43□□□□□ -0.42
RRP1B-201ENST00000340648 SNAI2O43623 268 aa12.43□□□□□ -0.42
RRP1B-201ENST00000340648 OR9G9P0C7N8 305 aa12.43□□□□□ -0.42
RRP1B-201ENST00000340648 CD33P20138 364 aa12.43□□□□□ -0.42
RRP1B-201ENST00000340648 WDR31Q8NA23 367 aa12.43□□□□□ -0.42
RRP1B-201ENST00000340648 IFI27L2Q9H2X8 130 aa12.43□□□□□ -0.42
RRP1B-201ENST00000340648 SCGB1D4Q6XE38 83 aa12.42□□□□□ -0.42
RRP1B-201ENST00000340648 LIME1Q9H400 295 aa12.42□□□□□ -0.42
RRP1B-201ENST00000340648 PRDM13Q9H4Q3 707 aa12.42□□□□□ -0.42
RRP1B-201ENST00000340648 FAM90A27PA6NNH2 459 aa12.42□□□□□ -0.42
RRP1B-201ENST00000340648 NUDT3O95989 172 aa12.42□□□□□ -0.42
RRP1B-201ENST00000340648 CSRP1P21291 193 aaKnown RBP12.42□□□□□ -0.42
RRP1B-201ENST00000340648 CKS2P33552 79 aa12.42□□□□□ -0.42
RRP1B-201ENST00000340648 GOLT1AQ6ZVE7 132 aa12.42□□□□□ -0.42
RRP1B-201ENST00000340648 MRPL37Q9BZE1 423 aaKnown RBP12.42□□□□□ -0.42
RRP1B-201ENST00000340648 ANAPC1Q9H1A4 1944 aa12.42□□□□□ -0.42
RRP1B-201ENST00000340648 F5H697 171 aa12.42□□□□□ -0.42
RRP1B-201ENST00000340648 LHX2P50458 406 aa12.42□□□□□ -0.42
RRP1B-201ENST00000340648 ACTL10Q5JWF8 245 aa12.42□□□□□ -0.42
RRP1B-201ENST00000340648 Q6ZRM9 215 aa12.42□□□□□ -0.42
RRP1B-201ENST00000340648 PEX7O00628 323 aa12.42□□□□□ -0.42
RRP1B-201ENST00000340648 ASCL5Q7RTU5 278 aa12.42□□□□□ -0.42
RRP1B-201ENST00000340648 SSBP4Q9BWG4 385 aaPredicted RBP12.42□□□□□ -0.42
RRP1B-201ENST00000340648 TMEM265A0A087WTH1 108 aa12.41□□□□□ -0.42
RRP1B-201ENST00000340648 PINLYPA6NC86 204 aa12.41□□□□□ -0.42
RRP1B-201ENST00000340648 CECR9P0C854 216 aa12.41□□□□□ -0.42
RRP1B-201ENST00000340648 C1orf194Q5T5A4 169 aa12.41□□□□□ -0.42
RRP1B-201ENST00000340648 TMEM42Q69YG0 159 aa12.41□□□□□ -0.42
RRP1B-201ENST00000340648 Q6ZT83 130 aa12.41□□□□□ -0.42
RRP1B-201ENST00000340648 BMPERQ8N8U9 685 aa12.41□□□□□ -0.42
RRP1B-201ENST00000340648 C2orf88Q9BSF0 95 aa12.41□□□□□ -0.42
RRP1B-201ENST00000340648 F11RQ9Y624 299 aaKnown RBP12.41□□□□□ -0.42
RRP1B-201ENST00000340648 ZDBF2Q9HCK1 2354 aa12.41□□□□□ -0.42
RRP1B-201ENST00000340648 CIDEAO60543 219 aa12.41□□□□□ -0.42
RRP1B-201ENST00000340648 SRSF7Q16629 238 aaKnown RBP eCLIP12.41□□□□□ -0.42
RRP1B-201ENST00000340648 GGNQ86UU5 652 aa12.41□□□□□ -0.42
RRP1B-201ENST00000340648 C17orf82Q86X59 251 aaPredicted RBP12.41□□□□□ -0.42
RRP1B-201ENST00000340648 COL25A1Q9BXS0 654 aaPredicted RBP12.41□□□□□ -0.42
RRP1B-201ENST00000340648 GCSHP23434 173 aa12.41□□□□□ -0.42
RRP1B-201ENST00000340648 MC5RP33032 325 aa12.41□□□□□ -0.42
RRP1B-201ENST00000340648 TIMP3P35625 211 aa12.41□□□□□ -0.42
RRP1B-201ENST00000340648 ACSF3Q4G176 576 aaPredicted RBP12.41□□□□□ -0.42
RRP1B-201ENST00000340648 OR10AG1Q8NH19 301 aa12.41□□□□□ -0.42
RRP1B-201ENST00000340648 RNF166Q96A37 237 aaPredicted RBP12.41□□□□□ -0.42
RRP1B-201ENST00000340648 ARF6P62330 175 aa12.41□□□□□ -0.42
RRP1B-201ENST00000340648 RPL30P62888 115 aaKnown RBP12.41□□□□□ -0.42
RRP1B-201ENST00000340648 IZUMO1RA6ND01 250 aa12.4□□□□□ -0.42
RRP1B-201ENST00000340648 KIR2DL2P43627 348 aaPredicted RBP12.4□□□□□ -0.42
RRP1B-201ENST00000340648 PLP1P60201 277 aa12.4□□□□□ -0.42
RRP1B-201ENST00000340648 OR4C13Q8NGP0 309 aa12.4□□□□□ -0.42
RRP1B-201ENST00000340648 FANCMQ8IYD8 2048 aa12.4□□□□□ -0.42
RRP1B-201ENST00000340648 EREGO14944 169 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms