RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 DBX1A6NMT0 343 aa11.79□□□□□ -0.52
VAPA-201ENST00000340541 NDUFB8O95169 186 aa11.79□□□□□ -0.52
VAPA-201ENST00000340541 CTSDP07339 412 aaPredicted RBP11.79□□□□□ -0.52
VAPA-201ENST00000340541 ATP5G2Q06055 141 aa11.79□□□□□ -0.52
VAPA-201ENST00000340541 EXOSC2Q13868 293 aaKnown RBP11.79□□□□□ -0.52
VAPA-201ENST00000340541 KLF5Q13887 457 aaPredicted RBP11.79□□□□□ -0.52
VAPA-201ENST00000340541 ZNF79Q15937 498 aa11.79□□□□□ -0.52
VAPA-201ENST00000340541 C15orf32Q32M92 178 aa11.79□□□□□ -0.52
VAPA-201ENST00000340541 ACSM6Q6P461 480 aa11.79□□□□□ -0.52
VAPA-201ENST00000340541 ZFAND1Q8TCF1 268 aa11.79□□□□□ -0.52
VAPA-201ENST00000340541 TRIM63Q969Q1 353 aa11.79□□□□□ -0.52
VAPA-201ENST00000340541 RTBDNQ9BSG5 229 aaPredicted RBP11.79□□□□□ -0.52
VAPA-201ENST00000340541 THAP7Q9BT49 309 aaPredicted RBP11.79□□□□□ -0.52
VAPA-201ENST00000340541 SLC2A8Q9NY64 477 aa11.79□□□□□ -0.52
VAPA-201ENST00000340541 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.78□□□□□ -0.52
VAPA-201ENST00000340541 DISC1C4P0D8 188 aa11.78□□□□□ -0.52
VAPA-201ENST00000340541 TRAPPC2P0DI81 140 aa11.78□□□□□ -0.52
VAPA-201ENST00000340541 TRAPPC2BP0DI82 140 aa11.78□□□□□ -0.52
VAPA-201ENST00000340541 ZP3P21754 424 aa11.78□□□□□ -0.52
VAPA-201ENST00000340541 INSL3P51460 131 aa11.78□□□□□ -0.52
VAPA-201ENST00000340541 WT1-ASQ06250 92 aa11.78□□□□□ -0.52
VAPA-201ENST00000340541 SURF2Q15527 256 aaPredicted RBP11.78□□□□□ -0.52
VAPA-201ENST00000340541 OR51S1Q8NGJ8 323 aa11.78□□□□□ -0.52
VAPA-201ENST00000340541 OR1L8Q8NGR8 309 aa11.78□□□□□ -0.52
VAPA-201ENST00000340541 C5orf66Q9H5L9 145 aa11.78□□□□□ -0.52
VAPA-201ENST00000340541 NDUFA4L2Q9NRX3 87 aa11.78□□□□□ -0.52
VAPA-201ENST00000340541 TMEM14BQ9NUH8 114 aa11.78□□□□□ -0.52
VAPA-201ENST00000340541 FBXL7Q9UJT9 491 aa11.78□□□□□ -0.52
VAPA-201ENST00000340541 GPR132Q9UNW8 380 aa11.78□□□□□ -0.52
VAPA-201ENST00000340541 LSM4Q9Y4Z0 139 aaKnown RBP11.78□□□□□ -0.52
VAPA-201ENST00000340541 SORL1Q92673 2214 aa11.77□□□□□ -0.53
VAPA-201ENST00000340541 C3orf85A0A1B0GTC6 90 aa11.77□□□□□ -0.53
VAPA-201ENST00000340541 C15orf61A6NNL5 157 aa11.77□□□□□ -0.53
VAPA-201ENST00000340541 BMPR1BO00238 502 aa11.77□□□□□ -0.53
VAPA-201ENST00000340541 SNAPC5O75971 98 aa11.77□□□□□ -0.53
VAPA-201ENST00000340541 IGKV1-5P01602 117 aa11.77□□□□□ -0.53
VAPA-201ENST00000340541 SERPINE2P07093 398 aa11.77□□□□□ -0.53
VAPA-201ENST00000340541 P0C879 139 aa11.77□□□□□ -0.53
VAPA-201ENST00000340541 KLF9Q13886 244 aaPredicted RBP11.77□□□□□ -0.53
VAPA-201ENST00000340541 SP6Q3SY56 376 aa11.77□□□□□ -0.53
VAPA-201ENST00000340541 THOC7Q6I9Y2 204 aaKnown RBP11.77□□□□□ -0.53
VAPA-201ENST00000340541 ZNF429Q86V71 674 aa11.77□□□□□ -0.53
VAPA-201ENST00000340541 CCDC71LQ8N9Z2 235 aa11.77□□□□□ -0.53
VAPA-201ENST00000340541 TSC22D3Q99576 134 aa11.77□□□□□ -0.53
VAPA-201ENST00000340541 PRRT1Q99946 306 aa11.77□□□□□ -0.53
VAPA-201ENST00000340541 COPZ2Q9P299 210 aa11.77□□□□□ -0.53
VAPA-201ENST00000340541 PRNDQ9UKY0 176 aa11.77□□□□□ -0.53
VAPA-201ENST00000340541 OR51B2Q9Y5P1 312 aa11.77□□□□□ -0.53
VAPA-201ENST00000340541 SAP30O75446 220 aa11.76□□□□□ -0.53
VAPA-201ENST00000340541 DHFRP00374 187 aa11.76□□□□□ -0.53
VAPA-201ENST00000340541 UCP1P25874 307 aa11.76□□□□□ -0.53
VAPA-201ENST00000340541 S100A5P33763 92 aa11.76□□□□□ -0.53
VAPA-201ENST00000340541 ETV6P41212 452 aa11.76□□□□□ -0.53
VAPA-201ENST00000340541 ECI1P42126 302 aa11.76□□□□□ -0.53
VAPA-201ENST00000340541 IZUMO4Q1ZYL8 232 aa11.76□□□□□ -0.53
VAPA-201ENST00000340541 PYDC2Q56P42 97 aa11.76□□□□□ -0.53
VAPA-201ENST00000340541 IL34Q6ZMJ4 242 aa11.76□□□□□ -0.53
VAPA-201ENST00000340541 H2BFWTQ7Z2G1 175 aa11.76□□□□□ -0.53
VAPA-201ENST00000340541 HSD17B13Q7Z5P4 300 aaPredicted RBP11.76□□□□□ -0.53
VAPA-201ENST00000340541 Q8N402 240 aa11.76□□□□□ -0.53
VAPA-201ENST00000340541 OR6Q1Q8NGQ2 317 aa11.76□□□□□ -0.53
VAPA-201ENST00000340541 OR5B3Q8NH48 314 aa11.76□□□□□ -0.53
VAPA-201ENST00000340541 CCDC140Q96MF4 163 aa11.76□□□□□ -0.53
VAPA-201ENST00000340541 KMT2CQ8NEZ4 4911 aaKnown RBP11.76□□□□□ -0.53
VAPA-201ENST00000340541 OR13C7P0DN81 318 aa11.75□□□□□ -0.53
VAPA-201ENST00000340541 HIST1H1BP16401 226 aaKnown RBP11.75□□□□□ -0.53
VAPA-201ENST00000340541 MFAP2P55001 183 aa11.75□□□□□ -0.53
VAPA-201ENST00000340541 SYNJ2BPP57105 145 aa11.75□□□□□ -0.53
VAPA-201ENST00000340541 GDPD1Q8N9F7 314 aa11.75□□□□□ -0.53
VAPA-201ENST00000340541 LSM10Q969L4 123 aaKnown RBP11.75□□□□□ -0.53
VAPA-201ENST00000340541 HINT2Q9BX68 163 aa11.75□□□□□ -0.53
VAPA-201ENST00000340541 FKBP11Q9NYL4 201 aa11.75□□□□□ -0.53
VAPA-201ENST00000340541 C14orf166Q9Y224 244 aaKnown RBP11.75□□□□□ -0.53
VAPA-201ENST00000340541 S4R3C0 116 aa11.75□□□□□ -0.53
VAPA-201ENST00000340541 U3KQK5 164 aa11.75□□□□□ -0.53
VAPA-201ENST00000340541 MFSD2BA6NFX1 497 aa11.74□□□□□ -0.53
VAPA-201ENST00000340541 B3GALNT1O75752 331 aa11.74□□□□□ -0.53
VAPA-201ENST00000340541 IGHV3-23P01764 117 aa11.74□□□□□ -0.53
VAPA-201ENST00000340541 OR5AC1P0C628 307 aa11.74□□□□□ -0.53
VAPA-201ENST00000340541 DEFA4P12838 97 aa11.74□□□□□ -0.53
VAPA-201ENST00000340541 RPEL1Q2QD12 228 aa11.74□□□□□ -0.53
VAPA-201ENST00000340541 OR9G4Q8NGQ1 327 aa11.74□□□□□ -0.53
VAPA-201ENST00000340541 LHFPL5Q8TAF8 219 aa11.74□□□□□ -0.53
VAPA-201ENST00000340541 GLYATL2Q8WU03 294 aa11.74□□□□□ -0.53
VAPA-201ENST00000340541 TMEM230Q96A57 120 aa11.74□□□□□ -0.53
VAPA-201ENST00000340541 PRR25Q96S07 402 aa11.74□□□□□ -0.53
VAPA-201ENST00000340541 SRRQ9GZT4 340 aa11.74□□□□□ -0.53
VAPA-201ENST00000340541 TMEM222Q9H0R3 208 aa11.74□□□□□ -0.53
VAPA-201ENST00000340541 NAA60Q9H7X0 242 aa11.74□□□□□ -0.53
VAPA-201ENST00000340541 ZNF256Q9Y2P7 627 aaPredicted RBP11.74□□□□□ -0.53
VAPA-201ENST00000340541 A0A0B4J293 547 aa11.73□□□□□ -0.53
VAPA-201ENST00000340541 A0A0G2JRQ6 117 aa11.73□□□□□ -0.53
VAPA-201ENST00000340541 CRYM-AS1A6NIL9 109 aa11.73□□□□□ -0.53
VAPA-201ENST00000340541 PPP5D1E7EU14 171 aa11.73□□□□□ -0.53
VAPA-201ENST00000340541 CDS2O95674 445 aa11.73□□□□□ -0.53
VAPA-201ENST00000340541 TRIM16LQ309B1 348 aa11.73□□□□□ -0.53
VAPA-201ENST00000340541 FAM209BQ5JX69 171 aa11.73□□□□□ -0.53
VAPA-201ENST00000340541 OR4A16Q8NH70 328 aa11.73□□□□□ -0.53
VAPA-201ENST00000340541 OR4C12Q96R67 309 aa11.73□□□□□ -0.53
VAPA-201ENST00000340541 MCUBQ9NWR8 336 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms