RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 PQLC2Q6ZP29 291 aa11.89□□□□□ -0.51
CPSF7-201ENST00000340437 WDR31Q8NA23 367 aa11.89□□□□□ -0.51
CPSF7-201ENST00000340437 SNRNP40Q96DI7 357 aaKnown RBP11.89□□□□□ -0.51
CPSF7-201ENST00000340437 NPVFQ9HCQ7 196 aa11.89□□□□□ -0.51
CPSF7-201ENST00000340437 NAT8BQ9UHF3 227 aa11.89□□□□□ -0.51
CPSF7-201ENST00000340437 A8MXE2 369 aa11.89□□□□□ -0.51
CPSF7-201ENST00000340437 ADH4P08319 380 aa11.89□□□□□ -0.51
CPSF7-201ENST00000340437 ZNF25P17030 456 aaPredicted RBP11.89□□□□□ -0.51
CPSF7-201ENST00000340437 KRTCAP3Q53RY4 240 aa11.89□□□□□ -0.51
CPSF7-201ENST00000340437 ARSJQ5FYB0 599 aaPredicted RBP11.89□□□□□ -0.51
CPSF7-201ENST00000340437 TEPPQ6URK8 271 aa11.89□□□□□ -0.51
CPSF7-201ENST00000340437 Q8N7P7 452 aa11.89□□□□□ -0.51
CPSF7-201ENST00000340437 HES4Q9HCC6 221 aa11.89□□□□□ -0.51
CPSF7-201ENST00000340437 AHRRA9YTQ3 701 aa11.89□□□□□ -0.51
CPSF7-201ENST00000340437 C15orf65H3BRN8 121 aa11.89□□□□□ -0.51
CPSF7-201ENST00000340437 CDKN1AP38936 164 aa11.89□□□□□ -0.51
CPSF7-201ENST00000340437 REG1BP48304 166 aa11.89□□□□□ -0.51
CPSF7-201ENST00000340437 RPL15P61313 204 aaKnown RBP11.89□□□□□ -0.51
CPSF7-201ENST00000340437 RAB31Q13636 194 aa11.89□□□□□ -0.51
CPSF7-201ENST00000340437 SGK494Q96LW2 274 aa11.89□□□□□ -0.51
CPSF7-201ENST00000340437 KMT2EQ8IZD2 1858 aa11.88□□□□□ -0.51
CPSF7-201ENST00000340437 CA1P00915 261 aaPredicted RBP11.88□□□□□ -0.51
CPSF7-201ENST00000340437 CD59P13987 128 aa11.88□□□□□ -0.51
CPSF7-201ENST00000340437 SUMO1P63165 101 aaKnown RBP11.88□□□□□ -0.51
CPSF7-201ENST00000340437 RELBQ01201 579 aa11.88□□□□□ -0.51
CPSF7-201ENST00000340437 EIF4EBP1Q13541 118 aaPredicted RBP11.88□□□□□ -0.51
CPSF7-201ENST00000340437 SLC24A4Q8NFF2 622 aa11.88□□□□□ -0.51
CPSF7-201ENST00000340437 ITLN1Q8WWA0 313 aa11.88□□□□□ -0.51
CPSF7-201ENST00000340437 IGHV2OR16-5A0A0B4J2B6 119 aa11.88□□□□□ -0.51
CPSF7-201ENST00000340437 MKRN2OSH3BPM6 223 aa11.88□□□□□ -0.51
CPSF7-201ENST00000340437 K7EN84 100 aa11.88□□□□□ -0.51
CPSF7-201ENST00000340437 STAG3L2P0CL84 134 aa11.88□□□□□ -0.51
CPSF7-201ENST00000340437 STAG3L3P0CL85 134 aa11.88□□□□□ -0.51
CPSF7-201ENST00000340437 NTF3P20783 257 aa11.88□□□□□ -0.51
CPSF7-201ENST00000340437 TNFSF10P50591 281 aa11.88□□□□□ -0.51
CPSF7-201ENST00000340437 RPH3ALQ9UNE2 315 aa11.88□□□□□ -0.51
CPSF7-201ENST00000340437 PRB4P10163 310 aaPredicted RBP11.88□□□□□ -0.51
CPSF7-201ENST00000340437 OPRK1P41145 380 aa11.88□□□□□ -0.51
CPSF7-201ENST00000340437 RHOBP62745 196 aa11.88□□□□□ -0.51
CPSF7-201ENST00000340437 LCN2P80188 198 aa11.88□□□□□ -0.51
CPSF7-201ENST00000340437 MSMPQ1L6U9 139 aa11.88□□□□□ -0.51
CPSF7-201ENST00000340437 CALYQ9NYX4 217 aa11.88□□□□□ -0.51
CPSF7-201ENST00000340437 WNT2P09544 360 aa11.87□□□□□ -0.51
CPSF7-201ENST00000340437 MRPS11P82912 194 aaKnown RBP11.87□□□□□ -0.51
CPSF7-201ENST00000340437 OR4A47Q6IF82 309 aa11.87□□□□□ -0.51
CPSF7-201ENST00000340437 PPP1R35Q8TAP8 253 aa11.87□□□□□ -0.51
CPSF7-201ENST00000340437 IGHV1-18A0A0C4DH31 117 aa11.87□□□□□ -0.51
CPSF7-201ENST00000340437 M0R143 59 aa11.87□□□□□ -0.51
CPSF7-201ENST00000340437 GNG4P50150 75 aa11.87□□□□□ -0.51
CPSF7-201ENST00000340437 PRB3Q04118 309 aaPredicted RBP11.87□□□□□ -0.51
CPSF7-201ENST00000340437 PEAR1Q5VY43 1037 aaPredicted RBP11.87□□□□□ -0.51
CPSF7-201ENST00000340437 MMD2Q8IY49 270 aa11.87□□□□□ -0.51
CPSF7-201ENST00000340437 CCL13Q99616 98 aa11.87□□□□□ -0.51
CPSF7-201ENST00000340437 SSBP3Q9BWW4 388 aaPredicted RBP11.87□□□□□ -0.51
CPSF7-201ENST00000340437 DMXL1Q9Y485 3027 aa11.87□□□□□ -0.51
CPSF7-201ENST00000340437 TET2Q6N021 2002 aaPredicted RBP11.87□□□□□ -0.51
CPSF7-201ENST00000340437 APELAP0DMC3 54 aa11.87□□□□□ -0.51
CPSF7-201ENST00000340437 PRR27Q6MZM9 219 aa11.87□□□□□ -0.51
CPSF7-201ENST00000340437 ZCCHC24Q8N2G6 241 aaKnown RBP11.87□□□□□ -0.51
CPSF7-201ENST00000340437 GCSAMQ8N6F7 178 aa11.87□□□□□ -0.51
CPSF7-201ENST00000340437 BTF3L4Q96K17 158 aa11.87□□□□□ -0.51
CPSF7-201ENST00000340437 SAA2-SAA4A0A096LPE2 208 aa11.86□□□□□ -0.51
CPSF7-201ENST00000340437 TRAV34A0A0B4J273 112 aa11.86□□□□□ -0.51
CPSF7-201ENST00000340437 HELTA6NFD8 242 aa11.86□□□□□ -0.51
CPSF7-201ENST00000340437 SP9P0CG40 484 aa11.86□□□□□ -0.51
CPSF7-201ENST00000340437 SAA2P0DJI9 122 aaPredicted RBP11.86□□□□□ -0.51
CPSF7-201ENST00000340437 OR10J1P30954 320 aa11.86□□□□□ -0.51
CPSF7-201ENST00000340437 TPPP2P59282 170 aa11.86□□□□□ -0.51
CPSF7-201ENST00000340437 COA6Q5JTJ3 125 aaKnown RBP11.86□□□□□ -0.51
CPSF7-201ENST00000340437 DBX2Q6ZNG2 339 aa11.86□□□□□ -0.51
CPSF7-201ENST00000340437 C2orf88Q9BSF0 95 aa11.86□□□□□ -0.51
CPSF7-201ENST00000340437 PLAUP00749 431 aa11.86□□□□□ -0.51
CPSF7-201ENST00000340437 VDAC2P45880 294 aaPredicted RBP11.86□□□□□ -0.51
CPSF7-201ENST00000340437 CENPWQ5EE01 88 aa11.86□□□□□ -0.51
CPSF7-201ENST00000340437 PROCRQ9UNN8 238 aa11.86□□□□□ -0.51
CPSF7-201ENST00000340437 OR51B2Q9Y5P1 312 aa11.86□□□□□ -0.51
CPSF7-201ENST00000340437 SMG1Q96Q15 3661 aaKnown RBP11.86□□□□□ -0.51
CPSF7-201ENST00000340437 J3QR06 171 aa11.85□□□□□ -0.51
CPSF7-201ENST00000340437 MGST3O14880 152 aa11.85□□□□□ -0.51
CPSF7-201ENST00000340437 RPEL1Q2QD12 228 aa11.85□□□□□ -0.51
CPSF7-201ENST00000340437 VWC2Q2TAL6 325 aa11.85□□□□□ -0.51
CPSF7-201ENST00000340437 CT45A1Q5HYN5 189 aa11.85□□□□□ -0.51
CPSF7-201ENST00000340437 Q6ZWC4 215 aa11.85□□□□□ -0.51
CPSF7-201ENST00000340437 ATOH7Q8N100 152 aa11.85□□□□□ -0.51
CPSF7-201ENST00000340437 OR10W1Q8NGF6 305 aa11.85□□□□□ -0.51
CPSF7-201ENST00000340437 OR4S2Q8NH73 311 aa11.85□□□□□ -0.51
CPSF7-201ENST00000340437 CT45A3Q8NHU0 189 aa11.85□□□□□ -0.51
CPSF7-201ENST00000340437 IFI27L2Q9H2X8 130 aa11.85□□□□□ -0.51
CPSF7-201ENST00000340437 DCAF16Q9NXF7 216 aa11.85□□□□□ -0.51
CPSF7-201ENST00000340437 CDX4O14627 284 aaPredicted RBP11.85□□□□□ -0.51
CPSF7-201ENST00000340437 MT-CO2P00403 227 aa11.85□□□□□ -0.51
CPSF7-201ENST00000340437 TYMSP04818 313 aa11.85□□□□□ -0.51
CPSF7-201ENST00000340437 LINC00479Q96M42 142 aa11.85□□□□□ -0.51
CPSF7-201ENST00000340437 TNRC6BQ9UPQ9 1833 aaKnown RBP11.85□□□□□ -0.51
CPSF7-201ENST00000340437 TRAV5A0A0B4J249 113 aa11.85□□□□□ -0.51
CPSF7-201ENST00000340437 KLK10O43240 276 aa11.85□□□□□ -0.51
CPSF7-201ENST00000340437 NUTF2P61970 127 aaKnown RBP11.85□□□□□ -0.51
CPSF7-201ENST00000340437 ZNF124Q15973 351 aa11.85□□□□□ -0.51
CPSF7-201ENST00000340437 FAM19A2Q8N3H0 131 aa11.85□□□□□ -0.51
CPSF7-201ENST00000340437 SIGLECL1Q8N7X8 197 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms