RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 ELK1P19419 428 aa10.24□□□□□ -0.77
SIRPB3P-201ENST00000340424 TSPAN5P62079 268 aa10.24□□□□□ -0.77
SIRPB3P-201ENST00000340424 ATP5G2Q06055 141 aa10.24□□□□□ -0.77
SIRPB3P-201ENST00000340424 THOC7Q6I9Y2 204 aaKnown RBP10.24□□□□□ -0.77
SIRPB3P-201ENST00000340424 OR51H1Q8NH63 302 aa10.24□□□□□ -0.77
SIRPB3P-201ENST00000340424 GPHA2Q96T91 129 aa10.24□□□□□ -0.77
SIRPB3P-201ENST00000340424 C7orf50Q9BRJ6 194 aaKnown RBP10.24□□□□□ -0.77
SIRPB3P-201ENST00000340424 HRASLSQ9HDD0 168 aa10.24□□□□□ -0.77
SIRPB3P-201ENST00000340424 FAM212BQ9NTI7 297 aaPredicted RBP10.24□□□□□ -0.77
SIRPB3P-201ENST00000340424 LSM4Q9Y4Z0 139 aaKnown RBP10.24□□□□□ -0.77
SIRPB3P-201ENST00000340424 COL7A1Q02388 2944 aa10.23□□□□□ -0.77
SIRPB3P-201ENST00000340424 ELOA3CA0A087WX78 387 aaPredicted RBP10.23□□□□□ -0.77
SIRPB3P-201ENST00000340424 FAM240BA0A1B0GVZ2 78 aa10.23□□□□□ -0.77
SIRPB3P-201ENST00000340424 C7orf66A4D0T2 115 aa10.23□□□□□ -0.77
SIRPB3P-201ENST00000340424 ANKRD34BA5PLL1 514 aa10.23□□□□□ -0.77
SIRPB3P-201ENST00000340424 GPR31O00270 319 aa10.23□□□□□ -0.77
SIRPB3P-201ENST00000340424 CRYGCP07315 174 aa10.23□□□□□ -0.77
SIRPB3P-201ENST00000340424 NHLRC4P0CG21 123 aaPredicted RBP10.23□□□□□ -0.77
SIRPB3P-201ENST00000340424 HIST1H1BP16401 226 aaKnown RBP10.23□□□□□ -0.77
SIRPB3P-201ENST00000340424 TBPP20226 339 aa10.23□□□□□ -0.77
SIRPB3P-201ENST00000340424 F2RP25116 425 aa10.23□□□□□ -0.77
SIRPB3P-201ENST00000340424 ERVK-16P61578 105 aa10.23□□□□□ -0.77
SIRPB3P-201ENST00000340424 KLF5Q13887 457 aaPredicted RBP10.23□□□□□ -0.77
SIRPB3P-201ENST00000340424 RPEL1Q2QD12 228 aa10.23□□□□□ -0.77
SIRPB3P-201ENST00000340424 VAX1Q5SQQ9 334 aa10.23□□□□□ -0.77
SIRPB3P-201ENST00000340424 C10orf55Q5SWW7 151 aa10.23□□□□□ -0.77
SIRPB3P-201ENST00000340424 SSX9Q7RTT3 188 aa10.23□□□□□ -0.77
SIRPB3P-201ENST00000340424 HSD17B13Q7Z5P4 300 aaPredicted RBP10.23□□□□□ -0.77
SIRPB3P-201ENST00000340424 DMBX1Q8NFW5 382 aa10.23□□□□□ -0.77
SIRPB3P-201ENST00000340424 FYTTD1Q96QD9 318 aaKnown RBP10.23□□□□□ -0.77
SIRPB3P-201ENST00000340424 PRR25Q96S07 402 aa10.23□□□□□ -0.77
SIRPB3P-201ENST00000340424 SIGLEC8Q9NYZ4 499 aa10.23□□□□□ -0.77
SIRPB3P-201ENST00000340424 ALG5Q9Y673 324 aa10.23□□□□□ -0.77
SIRPB3P-201ENST00000340424 CTDSPLO15194 276 aa10.22□□□□□ -0.77
SIRPB3P-201ENST00000340424 GSTZ1O43708 216 aaPredicted RBP10.22□□□□□ -0.77
SIRPB3P-201ENST00000340424 PGLYRP1O75594 196 aaPredicted RBP10.22□□□□□ -0.77
SIRPB3P-201ENST00000340424 LY86O95711 162 aa10.22□□□□□ -0.77
SIRPB3P-201ENST00000340424 RLN1P04808 185 aa10.22□□□□□ -0.77
SIRPB3P-201ENST00000340424 IL6RP08887 468 aaPredicted RBP10.22□□□□□ -0.77
SIRPB3P-201ENST00000340424 PSMB6P28072 239 aa10.22□□□□□ -0.77
SIRPB3P-201ENST00000340424 UCP3P55916 312 aa10.22□□□□□ -0.77
SIRPB3P-201ENST00000340424 RRAS2P62070 204 aaPredicted RBP10.22□□□□□ -0.77
SIRPB3P-201ENST00000340424 EXOSC2Q13868 293 aaKnown RBP10.22□□□□□ -0.77
SIRPB3P-201ENST00000340424 IL18Q14116 193 aa10.22□□□□□ -0.77
SIRPB3P-201ENST00000340424 KLK9Q2XQG4 91 aa10.22□□□□□ -0.77
SIRPB3P-201ENST00000340424 C15orf32Q32M92 178 aa10.22□□□□□ -0.77
SIRPB3P-201ENST00000340424 OR9G4Q8NGQ1 327 aa10.22□□□□□ -0.77
SIRPB3P-201ENST00000340424 COMMD5Q9GZQ3 224 aa10.22□□□□□ -0.77
SIRPB3P-201ENST00000340424 FXYD6Q9H0Q3 95 aa10.22□□□□□ -0.77
SIRPB3P-201ENST00000340424 TMEM140Q9NV12 185 aa10.22□□□□□ -0.77
SIRPB3P-201ENST00000340424 EXTL2Q9UBQ6 330 aa10.22□□□□□ -0.77
SIRPB3P-201ENST00000340424 KLK9Q9UKQ9 250 aa10.22□□□□□ -0.77
SIRPB3P-201ENST00000340424 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.21□□□□□ -0.77
SIRPB3P-201ENST00000340424 MARCH11A6NNE9 402 aa10.21□□□□□ -0.77
SIRPB3P-201ENST00000340424 UPK2O00526 184 aa10.21□□□□□ -0.77
SIRPB3P-201ENST00000340424 CYB5BO43169 146 aa10.21□□□□□ -0.77
SIRPB3P-201ENST00000340424 S1PR2O95136 353 aa10.21□□□□□ -0.77
SIRPB3P-201ENST00000340424 IGLV1-51P01701 117 aa10.21□□□□□ -0.77
SIRPB3P-201ENST00000340424 CTRB1P17538 263 aa10.21□□□□□ -0.77
SIRPB3P-201ENST00000340424 OR2B8PP59922 312 aa10.21□□□□□ -0.77
SIRPB3P-201ENST00000340424 CTRB2Q6GPI1 263 aa10.21□□□□□ -0.77
SIRPB3P-201ENST00000340424 SLC38A6Q8IZM9 456 aa10.21□□□□□ -0.77
SIRPB3P-201ENST00000340424 SLC7A5P1Q8MH63 180 aa10.21□□□□□ -0.77
SIRPB3P-201ENST00000340424 COPZ2Q9P299 210 aa10.21□□□□□ -0.77
SIRPB3P-201ENST00000340424 PEMTQ9UBM1 199 aa10.21□□□□□ -0.77
SIRPB3P-201ENST00000340424 SMAD5-AS1Q9Y6J3 95 aa10.21□□□□□ -0.77
SIRPB3P-201ENST00000340424 INMT-MINDY4F8WBC2 141 aa10.2□□□□□ -0.78
SIRPB3P-201ENST00000340424 H0Y980 276 aa10.2□□□□□ -0.78
SIRPB3P-201ENST00000340424 RBMXL2O75526 392 aaKnown RBP10.2□□□□□ -0.78
SIRPB3P-201ENST00000340424 OR2J3O76001 311 aa10.2□□□□□ -0.78
SIRPB3P-201ENST00000340424 PRH1P02810 166 aa10.2□□□□□ -0.78
SIRPB3P-201ENST00000340424 IFNA6P05013 189 aa10.2□□□□□ -0.78
SIRPB3P-201ENST00000340424 DEFA4P12838 97 aa10.2□□□□□ -0.78
SIRPB3P-201ENST00000340424 GP9P14770 177 aa10.2□□□□□ -0.78
SIRPB3P-201ENST00000340424 SYNJ2BPP57105 145 aa10.2□□□□□ -0.78
SIRPB3P-201ENST00000340424 MRPS10P82664 201 aaKnown RBP10.2□□□□□ -0.78
SIRPB3P-201ENST00000340424 SSBP1Q04837 148 aaKnown RBP10.2□□□□□ -0.78
SIRPB3P-201ENST00000340424 ARRDC1Q8N5I2 433 aa10.2□□□□□ -0.78
SIRPB3P-201ENST00000340424 SORL1Q92673 2214 aa10.2□□□□□ -0.78
SIRPB3P-201ENST00000340424 RSRP1Q9BUV0 290 aa10.2□□□□□ -0.78
SIRPB3P-201ENST00000340424 QTRT1Q9BXR0 403 aaKnown RBP10.2□□□□□ -0.78
SIRPB3P-201ENST00000340424 THYN1Q9P016 225 aa10.2□□□□□ -0.78
SIRPB3P-201ENST00000340424 FBXL7Q9UJT9 491 aa10.2□□□□□ -0.78
SIRPB3P-201ENST00000340424 A0A1B0GW64 132 aa10.19□□□□□ -0.78
SIRPB3P-201ENST00000340424 E7EUB6 86 aa10.19□□□□□ -0.78
SIRPB3P-201ENST00000340424 TRBV12-3P01733 135 aa10.19□□□□□ -0.78
SIRPB3P-201ENST00000340424 AREGP15514 252 aa10.19□□□□□ -0.78
SIRPB3P-201ENST00000340424 BTCP35070 178 aa10.19□□□□□ -0.78
SIRPB3P-201ENST00000340424 INPP1P49441 399 aa10.19□□□□□ -0.78
SIRPB3P-201ENST00000340424 DEFA5Q01523 94 aa10.19□□□□□ -0.78
SIRPB3P-201ENST00000340424 RNASE10Q5GAN6 216 aaKnown RBP10.19□□□□□ -0.78
SIRPB3P-201ENST00000340424 ZNF767PQ75MW2 155 aa10.19□□□□□ -0.78
SIRPB3P-201ENST00000340424 FCAMRQ8WWV6 532 aa10.19□□□□□ -0.78
SIRPB3P-201ENST00000340424 EEF1AKMT3Q96AZ1 226 aa10.19□□□□□ -0.78
SIRPB3P-201ENST00000340424 CXorf58Q96LI9 332 aa10.19□□□□□ -0.78
SIRPB3P-201ENST00000340424 THAP7Q9BT49 309 aaPredicted RBP10.19□□□□□ -0.78
SIRPB3P-201ENST00000340424 FKBP11Q9NYL4 201 aa10.19□□□□□ -0.78
SIRPB3P-201ENST00000340424 MTFP1Q9UDX5 166 aa10.19□□□□□ -0.78
SIRPB3P-201ENST00000340424 IGLV11-55A0A075B6I3 123 aa10.18□□□□□ -0.78
SIRPB3P-201ENST00000340424 TRBV7-1A0A0A6YYK4 115 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms