RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 GNB4Q9HAV0 340 aa13.33□□□□□ -0.28
SCARB1-202ENST00000339570 KLF13Q9Y2Y9 288 aaPredicted RBP13.33□□□□□ -0.28
SCARB1-202ENST00000339570 A8MXE2 369 aa13.33□□□□□ -0.28
SCARB1-202ENST00000339570 GFRA3O60609 400 aa13.33□□□□□ -0.28
SCARB1-202ENST00000339570 TYMSP04818 313 aa13.33□□□□□ -0.28
SCARB1-202ENST00000339570 GNG4P50150 75 aa13.33□□□□□ -0.28
SCARB1-202ENST00000339570 MAJINQ3KP22 176 aa13.33□□□□□ -0.28
SCARB1-202ENST00000339570 DMRTA1Q5VZB9 504 aa13.33□□□□□ -0.28
SCARB1-202ENST00000339570 MOGAT3Q86VF5 341 aa13.33□□□□□ -0.28
SCARB1-202ENST00000339570 FBXL7Q9UJT9 491 aa13.33□□□□□ -0.28
SCARB1-202ENST00000339570 MRPS18CQ9Y3D5 142 aaKnown RBP13.33□□□□□ -0.28
SCARB1-202ENST00000339570 ZNF253O75346 499 aa13.32□□□□□ -0.28
SCARB1-202ENST00000339570 RPLP1P05386 114 aaKnown RBP13.32□□□□□ -0.28
SCARB1-202ENST00000339570 STAG3L2P0CL84 134 aa13.32□□□□□ -0.28
SCARB1-202ENST00000339570 STAG3L3P0CL85 134 aa13.32□□□□□ -0.28
SCARB1-202ENST00000339570 ZNF83P51522 516 aa13.32□□□□□ -0.28
SCARB1-202ENST00000339570 ACSF3Q4G176 576 aaPredicted RBP13.32□□□□□ -0.28
SCARB1-202ENST00000339570 PARD6GQ9BYG4 376 aaPredicted RBP13.32□□□□□ -0.28
SCARB1-202ENST00000339570 TBL2Q9Y4P3 447 aaKnown RBP13.32□□□□□ -0.28
SCARB1-202ENST00000339570 DYSFO75923 2080 aa13.32□□□□□ -0.28
SCARB1-202ENST00000339570 CECR9P0C854 216 aa13.32□□□□□ -0.28
SCARB1-202ENST00000339570 NPY1RP25929 384 aa13.32□□□□□ -0.28
SCARB1-202ENST00000339570 RPEL1Q2QD12 228 aa13.32□□□□□ -0.28
SCARB1-202ENST00000339570 DNLZQ5SXM8 178 aa13.32□□□□□ -0.28
SCARB1-202ENST00000339570 LCN12Q6JVE5 192 aa13.32□□□□□ -0.28
SCARB1-202ENST00000339570 DIRC3C9JPN6 131 aa13.31□□□□□ -0.28
SCARB1-202ENST00000339570 REG1BP48304 166 aa13.31□□□□□ -0.28
SCARB1-202ENST00000339570 ZBTB34Q8NCN2 500 aa13.31□□□□□ -0.28
SCARB1-202ENST00000339570 TXN2Q99757 166 aa13.31□□□□□ -0.28
SCARB1-202ENST00000339570 OPN3Q9H1Y3 402 aaPredicted RBP13.31□□□□□ -0.28
SCARB1-202ENST00000339570 CXXC4Q9H2H0 198 aa13.31□□□□□ -0.28
SCARB1-202ENST00000339570 GOLT1BQ9Y3E0 138 aa13.31□□□□□ -0.28
SCARB1-202ENST00000339570 TRAV5A0A0B4J249 113 aa13.31□□□□□ -0.28
SCARB1-202ENST00000339570 HELTA6NFD8 242 aa13.31□□□□□ -0.28
SCARB1-202ENST00000339570 PAX1P15863 534 aa13.31□□□□□ -0.28
SCARB1-202ENST00000339570 SRIP30626 198 aa13.31□□□□□ -0.28
SCARB1-202ENST00000339570 MORN2Q502X0 79 aa13.31□□□□□ -0.28
SCARB1-202ENST00000339570 LBHQ53QV2 105 aaPredicted RBP13.31□□□□□ -0.28
SCARB1-202ENST00000339570 TEPPQ6URK8 271 aa13.31□□□□□ -0.28
SCARB1-202ENST00000339570 PTPRZ1P23471 2315 aaPredicted RBP13.31□□□□□ -0.28
SCARB1-202ENST00000339570 MED13LQ71F56 2210 aa13.31□□□□□ -0.28
SCARB1-202ENST00000339570 IQCF6A8MYZ5 107 aa13.31□□□□□ -0.28
SCARB1-202ENST00000339570 NPVFQ9HCQ7 196 aa13.31□□□□□ -0.28
SCARB1-202ENST00000339570 TCF21O43680 179 aa13.3□□□□□ -0.28
SCARB1-202ENST00000339570 GPR6P46095 362 aaPredicted RBP13.3□□□□□ -0.28
SCARB1-202ENST00000339570 FOXL1Q12952 345 aa13.3□□□□□ -0.28
SCARB1-202ENST00000339570 EAF1Q96JC9 268 aaPredicted RBP13.3□□□□□ -0.28
SCARB1-202ENST00000339570 IL36BQ9NZH7 164 aa13.3□□□□□ -0.28
SCARB1-202ENST00000339570 TP73-AS1Q9UF72 201 aa13.3□□□□□ -0.28
SCARB1-202ENST00000339570 H3BTX0 84 aa13.3□□□□□ -0.28
SCARB1-202ENST00000339570 TMEM183BQ1AE95 376 aa13.3□□□□□ -0.28
SCARB1-202ENST00000339570 TPTE2P1Q5T6R2 138 aa13.3□□□□□ -0.28
SCARB1-202ENST00000339570 SLC24A4Q8NFF2 622 aa13.3□□□□□ -0.28
SCARB1-202ENST00000339570 OR10W1Q8NGF6 305 aa13.3□□□□□ -0.28
SCARB1-202ENST00000339570 CD24P25063 80 aa13.29□□□□□ -0.28
SCARB1-202ENST00000339570 OPRK1P41145 380 aa13.29□□□□□ -0.28
SCARB1-202ENST00000339570 CAMPP49913 170 aa13.29□□□□□ -0.28
SCARB1-202ENST00000339570 RHOBP62745 196 aa13.29□□□□□ -0.28
SCARB1-202ENST00000339570 RELBQ01201 579 aa13.29□□□□□ -0.28
SCARB1-202ENST00000339570 GABRA6Q16445 453 aa13.29□□□□□ -0.28
SCARB1-202ENST00000339570 ACACAQ13085 2346 aa13.29□□□□□ -0.28
SCARB1-202ENST00000339570 IGKV1D-17A0A075B6S4 117 aa13.29□□□□□ -0.28
SCARB1-202ENST00000339570 H0Y8G0 127 aa13.29□□□□□ -0.28
SCARB1-202ENST00000339570 TOX4O94842 621 aa13.29□□□□□ -0.28
SCARB1-202ENST00000339570 RAB4AP20338 218 aa13.29□□□□□ -0.28
SCARB1-202ENST00000339570 RPP30P78346 268 aaKnown RBP13.29□□□□□ -0.28
SCARB1-202ENST00000339570 EIF4EBP1Q13541 118 aaPredicted RBP13.29□□□□□ -0.28
SCARB1-202ENST00000339570 TMEM68Q96MH6 324 aa13.29□□□□□ -0.28
SCARB1-202ENST00000339570 TMPRSS2O15393 492 aa13.29□□□□□ -0.28
SCARB1-202ENST00000339570 PRB3Q04118 309 aaPredicted RBP13.29□□□□□ -0.28
SCARB1-202ENST00000339570 OR4A47Q6IF82 309 aa13.29□□□□□ -0.28
SCARB1-202ENST00000339570 OR9G1Q8NH87 305 aa13.29□□□□□ -0.28
SCARB1-202ENST00000339570 C1orf159Q96HA4 380 aa13.29□□□□□ -0.28
SCARB1-202ENST00000339570 SSBP4Q9BWG4 385 aaPredicted RBP13.29□□□□□ -0.28
SCARB1-202ENST00000339570 CLCF1Q9UBD9 225 aa13.29□□□□□ -0.28
SCARB1-202ENST00000339570 CACNA1BQ00975 2339 aa13.29□□□□□ -0.28
SCARB1-202ENST00000339570 LNP1A1A4G5 178 aa13.28□□□□□ -0.28
SCARB1-202ENST00000339570 SPATA45Q537H7 98 aa13.28□□□□□ -0.28
SCARB1-202ENST00000339570 SPTA1P02549 2419 aa13.28□□□□□ -0.28
SCARB1-202ENST00000339570 IGHV3-21A0A0B4J1V1 117 aa13.28□□□□□ -0.28
SCARB1-202ENST00000339570 ZNF718Q3SXZ3 478 aa13.28□□□□□ -0.28
SCARB1-202ENST00000339570 C1orf210Q8IVY1 113 aa13.28□□□□□ -0.28
SCARB1-202ENST00000339570 FAM168AQ92567 244 aa13.28□□□□□ -0.28
SCARB1-202ENST00000339570 OR2V2Q96R30 315 aa13.28□□□□□ -0.28
SCARB1-202ENST00000339570 CDX2Q99626 313 aaPredicted RBP13.28□□□□□ -0.28
SCARB1-202ENST00000339570 TNRC6BQ9UPQ9 1833 aaKnown RBP13.28□□□□□ -0.28
SCARB1-202ENST00000339570 KIR2DL5BA0A0G2JN68 375 aa13.28□□□□□ -0.28
SCARB1-202ENST00000339570 KIR2DL5BA0A0G2JPC4 375 aa13.28□□□□□ -0.28
SCARB1-202ENST00000339570 TMEM210A6NLX4 147 aa13.28□□□□□ -0.28
SCARB1-202ENST00000339570 C15orf65H3BRN8 121 aa13.28□□□□□ -0.28
SCARB1-202ENST00000339570 M0R1B8 84 aa13.28□□□□□ -0.28
SCARB1-202ENST00000339570 RAB31Q13636 194 aa13.28□□□□□ -0.28
SCARB1-202ENST00000339570 VWC2Q2TAL6 325 aa13.28□□□□□ -0.28
SCARB1-202ENST00000339570 Q6ZN92 141 aa13.28□□□□□ -0.28
SCARB1-202ENST00000339570 KIR2DL5AQ8N109 375 aa13.28□□□□□ -0.28
SCARB1-202ENST00000339570 ST6GALNAC6Q969X2 333 aa13.28□□□□□ -0.28
SCARB1-202ENST00000339570 NABP2Q9BQ15 211 aa13.28□□□□□ -0.28
SCARB1-202ENST00000339570 NKX2-8O15522 239 aa13.27□□□□□ -0.28
SCARB1-202ENST00000339570 IGKV1-16P04430 117 aa13.27□□□□□ -0.28
SCARB1-202ENST00000339570 VDAC2P45880 294 aaPredicted RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms