RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 PRB4P10163 310 aaPredicted RBP11.18□□□□□ -0.62
COL2A1-201ENST00000337299 LIFP15018 202 aa11.18□□□□□ -0.62
COL2A1-201ENST00000337299 GFRA1P56159 465 aa11.18□□□□□ -0.62
COL2A1-201ENST00000337299 ARL17AQ8IVW1 177 aa11.18□□□□□ -0.62
COL2A1-201ENST00000337299 ZNF645Q8N7E2 425 aa11.18□□□□□ -0.62
COL2A1-201ENST00000337299 C5orf17Q8NAS9 161 aa11.18□□□□□ -0.62
COL2A1-201ENST00000337299 SIGLEC12Q96PQ1 595 aa11.18□□□□□ -0.62
COL2A1-201ENST00000337299 ZSWIM8A7E2V4 1837 aa11.17□□□□□ -0.62
COL2A1-201ENST00000337299 NPIPB13A6NJU9 1138 aa11.17□□□□□ -0.62
COL2A1-201ENST00000337299 NPIPB4C9JG80 1138 aa11.17□□□□□ -0.62
COL2A1-201ENST00000337299 ZBTB34Q8NCN2 500 aa11.17□□□□□ -0.62
COL2A1-201ENST00000337299 DOPEY2Q9Y3R5 2298 aa11.17□□□□□ -0.62
COL2A1-201ENST00000337299 TCF20Q9UGU0 1960 aaKnown RBP11.17□□□□□ -0.62
COL2A1-201ENST00000337299 ALPK3Q96L96 1907 aa11.17□□□□□ -0.62
COL2A1-201ENST00000337299 TRAV30A0A087WSZ9 112 aa11.17□□□□□ -0.62
COL2A1-201ENST00000337299 NDUFS8O00217 210 aa11.17□□□□□ -0.62
COL2A1-201ENST00000337299 IGLC2P0DOY2 106 aa11.17□□□□□ -0.62
COL2A1-201ENST00000337299 IGLC3P0DOY3 106 aa11.17□□□□□ -0.62
COL2A1-201ENST00000337299 ZNF718Q3SXZ3 478 aa11.17□□□□□ -0.62
COL2A1-201ENST00000337299 COL25A1Q9BXS0 654 aaPredicted RBP11.17□□□□□ -0.62
COL2A1-201ENST00000337299 ZNF703Q9H7S9 590 aaPredicted RBP11.17□□□□□ -0.62
COL2A1-201ENST00000337299 TCF19Q9Y242 345 aa11.17□□□□□ -0.62
COL2A1-201ENST00000337299 USF3Q68DE3 2245 aa11.17□□□□□ -0.62
COL2A1-201ENST00000337299 hCG_38984A0A1B0GV85 526 aa11.17□□□□□ -0.62
COL2A1-201ENST00000337299 hADV38S2A0JD32 116 aa11.17□□□□□ -0.62
COL2A1-201ENST00000337299 F2Z2F3 143 aa11.17□□□□□ -0.62
COL2A1-201ENST00000337299 IGFBP2P18065 325 aa11.17□□□□□ -0.62
COL2A1-201ENST00000337299 SRD5A2P31213 254 aa11.17□□□□□ -0.62
COL2A1-201ENST00000337299 SPINK14Q6IE38 97 aa11.17□□□□□ -0.62
COL2A1-201ENST00000337299 SLC25A40Q8TBP6 338 aa11.17□□□□□ -0.62
COL2A1-201ENST00000337299 SF3B5Q9BWJ5 86 aaKnown RBP11.17□□□□□ -0.62
COL2A1-201ENST00000337299 TRGV10A0A0A0MS01 117 aa11.16□□□□□ -0.62
COL2A1-201ENST00000337299 A1L4Q6 167 aa11.16□□□□□ -0.62
COL2A1-201ENST00000337299 VSTM5A8MXK1 200 aa11.16□□□□□ -0.62
COL2A1-201ENST00000337299 OR10AG1Q8NH19 301 aa11.16□□□□□ -0.62
COL2A1-201ENST00000337299 CLEC7AQ9BXN2 247 aa11.16□□□□□ -0.62
COL2A1-201ENST00000337299 TNXAQ16473 311 aa11.16□□□□□ -0.62
COL2A1-201ENST00000337299 OR2K2Q8NGT1 345 aa11.16□□□□□ -0.62
COL2A1-201ENST00000337299 C18orf15Q96N68 181 aa11.16□□□□□ -0.62
COL2A1-201ENST00000337299 RIGQ13278 110 aa11.16□□□□□ -0.62
COL2A1-201ENST00000337299 SCGB1D4Q6XE38 83 aa11.16□□□□□ -0.62
COL2A1-201ENST00000337299 TCF24Q7RTU0 167 aa11.16□□□□□ -0.62
COL2A1-201ENST00000337299 AP5S1Q9NUS5 200 aa11.16□□□□□ -0.62
COL2A1-201ENST00000337299 CADP27708 2225 aa11.16□□□□□ -0.62
COL2A1-201ENST00000337299 HIGD1CA8MV81 97 aa11.15□□□□□ -0.62
COL2A1-201ENST00000337299 RBFOX2O43251 390 aaKnown RBP eCLIP11.15□□□□□ -0.62
COL2A1-201ENST00000337299 CCL1P22362 96 aa11.15□□□□□ -0.62
COL2A1-201ENST00000337299 REG1BP48304 166 aa11.15□□□□□ -0.62
COL2A1-201ENST00000337299 FER1L6-AS2Q96M78 137 aa11.15□□□□□ -0.62
COL2A1-201ENST00000337299 SRXN1Q9BYN0 137 aa11.15□□□□□ -0.62
COL2A1-201ENST00000337299 TCFL5Q9UL49 500 aa11.15□□□□□ -0.62
COL2A1-201ENST00000337299 CACNA1BQ00975 2339 aa11.15□□□□□ -0.62
COL2A1-201ENST00000337299 IGHV3OR15-7A0A075B7D8 119 aa11.15□□□□□ -0.62
COL2A1-201ENST00000337299 FAM90A10PA6NDY2 464 aa11.15□□□□□ -0.62
COL2A1-201ENST00000337299 FAM90A18PA6NE21 464 aa11.15□□□□□ -0.62
COL2A1-201ENST00000337299 FAM90A16PA6NEW6 464 aa11.15□□□□□ -0.62
COL2A1-201ENST00000337299 FAM90A20PA6NIJ5 464 aa11.15□□□□□ -0.62
COL2A1-201ENST00000337299 FAM90A8PA6NJQ4 464 aa11.15□□□□□ -0.62
COL2A1-201ENST00000337299 FAM90A7PA6NKC0 464 aa11.15□□□□□ -0.62
COL2A1-201ENST00000337299 FAM90A22PA8MWA6 464 aa11.15□□□□□ -0.62
COL2A1-201ENST00000337299 FAM90A12PA8MX19 464 aa11.15□□□□□ -0.62
COL2A1-201ENST00000337299 FAM90A5PA8MXJ8 464 aa11.15□□□□□ -0.62
COL2A1-201ENST00000337299 FAM90A23PA8MXZ1 464 aa11.15□□□□□ -0.62
COL2A1-201ENST00000337299 IGKV1-5P01602 117 aa11.15□□□□□ -0.62
COL2A1-201ENST00000337299 FAM90A15PP0C7V4 464 aa11.15□□□□□ -0.62
COL2A1-201ENST00000337299 FAM90A13PP0C7W8 464 aa11.15□□□□□ -0.62
COL2A1-201ENST00000337299 FAM90A14PP0C7W9 464 aa11.15□□□□□ -0.62
COL2A1-201ENST00000337299 FAM90A24PP0C7X0 464 aa11.15□□□□□ -0.62
COL2A1-201ENST00000337299 CFPP27918 469 aa11.15□□□□□ -0.62
COL2A1-201ENST00000337299 SFTA2Q6UW10 78 aa11.15□□□□□ -0.62
COL2A1-201ENST00000337299 LSM4Q9Y4Z0 139 aaKnown RBP11.15□□□□□ -0.62
COL2A1-201ENST00000337299 EFNA2O43921 213 aa11.15□□□□□ -0.62
COL2A1-201ENST00000337299 LIPFP07098 398 aa11.15□□□□□ -0.62
COL2A1-201ENST00000337299 ZNF501Q96CX3 271 aaPredicted RBP11.15□□□□□ -0.62
COL2A1-201ENST00000337299 OR51B2Q9Y5P1 312 aa11.15□□□□□ -0.62
COL2A1-201ENST00000337299 IGHV1-69-2A0A0G2JMI3 117 aa11.15□□□□□ -0.63
COL2A1-201ENST00000337299 C8orf88P0DMB2 117 aa11.15□□□□□ -0.63
COL2A1-201ENST00000337299 SPATA31B1PQ5VZV4 182 aa11.15□□□□□ -0.63
COL2A1-201ENST00000337299 ZNF114Q8NC26 417 aa11.15□□□□□ -0.63
COL2A1-201ENST00000337299 DPF1Q92782 380 aa11.15□□□□□ -0.63
COL2A1-201ENST00000337299 IGKV1D-33P01593 117 aa11.14□□□□□ -0.63
COL2A1-201ENST00000337299 IGKV1-33P01594 117 aa11.14□□□□□ -0.63
COL2A1-201ENST00000337299 HES1Q14469 280 aa11.14□□□□□ -0.63
COL2A1-201ENST00000337299 JKAMPQ9P055 326 aa11.14□□□□□ -0.63
COL2A1-201ENST00000337299 TYMSP04818 313 aa11.14□□□□□ -0.63
COL2A1-201ENST00000337299 ABCA4P78363 2273 aa11.14□□□□□ -0.63
COL2A1-201ENST00000337299 SRSF9Q13242 221 aaKnown RBP eCLIP11.14□□□□□ -0.63
COL2A1-201ENST00000337299 GNB1LQ9BYB4 327 aa11.14□□□□□ -0.63
COL2A1-201ENST00000337299 KIR2DL5BA0A0G2JN68 375 aa11.13□□□□□ -0.63
COL2A1-201ENST00000337299 KIR2DL5BA0A0G2JPC4 375 aa11.13□□□□□ -0.63
COL2A1-201ENST00000337299 IGHV5-10-1A0A0J9YXX1 117 aa11.13□□□□□ -0.63
COL2A1-201ENST00000337299 HBBP68871 147 aa11.13□□□□□ -0.63
COL2A1-201ENST00000337299 KIR2DL5AQ8N109 375 aa11.13□□□□□ -0.63
COL2A1-201ENST00000337299 DCTN5Q9BTE1 182 aa11.13□□□□□ -0.63
COL2A1-201ENST00000337299 WNT9BO14905 357 aa11.13□□□□□ -0.63
COL2A1-201ENST00000337299 SYNGR3O43761 229 aa11.13□□□□□ -0.63
COL2A1-201ENST00000337299 TFF1P04155 84 aa11.13□□□□□ -0.63
COL2A1-201ENST00000337299 PAX9P55771 341 aa11.13□□□□□ -0.63
COL2A1-201ENST00000337299 CLEC2AQ6UVW9 174 aa11.13□□□□□ -0.63
COL2A1-201ENST00000337299 SRSF12Q8WXF0 261 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms