RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 FAM90A23PA8MXZ1 464 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 CDC42EP2O14613 210 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 FAM90A15PP0C7V4 464 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 FAM90A13PP0C7W8 464 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 FAM90A14PP0C7W9 464 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 FAM90A24PP0C7X0 464 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 PSG1P11464 419 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 SLC25A15Q9Y619 301 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 TRBV20-1A0A075B6N2 111 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 PRR32B1ATL7 298 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 LHX8Q68G74 356 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 FAM89BQ8N5H3 189 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 RCC1LQ96I51 464 aaKnown RBP8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 TBC1D29Q9UFV1 150 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 TMEM238C9JI98 176 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 GAGE5Q13069 117 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 GAGE6Q13070 117 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 CENPWQ5EE01 88 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 C9orf153Q5TBE3 101 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 C10orf111Q8N326 155 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 OR52M1Q8NGK5 317 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 AGMATQ9BSE5 352 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 PPIAL4EA0A075B759 164 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 TRGV5A0A0B4J1U4 118 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 IGLV3-25P01717 112 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 PPIAL4FP0DN26 164 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 TMEM144Q7Z5S9 345 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 PPIAL4AQ9Y536 164 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 CSPG4Q6UVK1 2322 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 A0A1B0GTH9 108 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 SPINK2P20155 84 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 ZNF664Q8N3J9 261 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 A0A1B0GTI1 187 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 GPX1P07203 203 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 FOXL2P58012 376 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 FOXD3Q9UJU5 478 aaPredicted RBP8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 KLF4O43474 513 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 OR13H1Q8NG92 308 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 HILPDAQ9Y5L2 63 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 SYNGR1O43759 233 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 PEX11BO96011 259 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 LHX2P50458 406 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 FER1L6-AS1Q8NA97 138 aa8.92□□□□□ -0.98
SPTBN1-201ENST00000333896 RNF222A6NCQ9 220 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 ZNF585BQ52M93 769 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 ANKRD29Q8N6D5 301 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 KLF2Q9Y5W3 355 aaPredicted RBP8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 A0A1B0GTL3 188 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 TSPAN7P41732 249 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 FMC1Q96HJ9 113 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 CCL26Q9Y258 94 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 A0A1B0GUT8 65 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 NKX2-2O95096 273 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 TBR1Q16650 682 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 ZNF385AQ96PM9 386 aaKnown RBP8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 LRRC61Q9BV99 259 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 LOC105371242A0A075B767 164 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 PPIAL4CA0A0B4J2A2 164 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 C1QAP02745 245 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 PPIAL4GP0DN37 164 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 C9orf40Q8IXQ3 194 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 MRPL27Q9P0M9 148 aaKnown RBP8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 IGHV3OR15-7A0A075B7D8 119 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 TRACP01848 142 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 TDGF1P13385 188 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 REG1BP48304 166 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 GZMMP51124 257 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 SERGEFQ9UGK8 458 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 LOXL2Q9Y4K0 774 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 MPC1Q9Y5U8 109 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 SOCS1O15524 211 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 ZNF708P17019 499 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 ORMDL3Q8N138 153 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 GGTLC3B5MD39 225 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 ICAM4Q14773 271 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 UNQ9370/PRO34162Q6UXP9 181 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 LOXL4Q96JB6 756 aa8.91□□□□□ -0.98
SPTBN1-201ENST00000333896 IGLV3-16A0A075B6K0 115 aa8.9□□□□□ -0.98
SPTBN1-201ENST00000333896 ZNF32P17041 273 aa8.9□□□□□ -0.98
SPTBN1-201ENST00000333896 RUNX1Q01196 453 aa8.9□□□□□ -0.98
SPTBN1-201ENST00000333896 OXLD1Q5BKU9 147 aa8.9□□□□□ -0.98
SPTBN1-201ENST00000333896 SPRED2Q7Z698 418 aa8.9□□□□□ -0.98
SPTBN1-201ENST00000333896 OR8B12Q8NGG6 310 aa8.9□□□□□ -0.98
SPTBN1-201ENST00000333896 HEXA-AS1Q9H8Q6 139 aa8.9□□□□□ -0.98
SPTBN1-201ENST00000333896 CCL28Q9NRJ3 127 aa8.9□□□□□ -0.98
SPTBN1-201ENST00000333896 A0A1W2PPC1 479 aa8.9□□□□□ -0.98
SPTBN1-201ENST00000333896 TM4SF1P30408 202 aa8.9□□□□□ -0.98
SPTBN1-201ENST00000333896 RHOGP84095 191 aa8.9□□□□□ -0.98
SPTBN1-201ENST00000333896 C1orf100Q5SVJ3 147 aa8.9□□□□□ -0.98
SPTBN1-201ENST00000333896 BOD1L2Q8IYS8 172 aa8.9□□□□□ -0.98
SPTBN1-201ENST00000333896 KIAA1549LQ6ZVL6 1849 aa8.9□□□□□ -0.98
SPTBN1-201ENST00000333896 A0A1W2PS18 150 aa8.9□□□□□ -0.98
SPTBN1-201ENST00000333896 TNFRSF6BO95407 300 aa8.9□□□□□ -0.98
SPTBN1-201ENST00000333896 RAMP3O60896 148 aa8.9□□□□□ -0.98
SPTBN1-201ENST00000333896 SP9P0CG40 484 aa8.9□□□□□ -0.98
SPTBN1-201ENST00000333896 VSIG8P0DPA2 414 aa8.9□□□□□ -0.98
SPTBN1-201ENST00000333896 PSG9Q00887 426 aa8.9□□□□□ -0.98
SPTBN1-201ENST00000333896 PIGYQ3MUY2 71 aa8.9□□□□□ -0.98
SPTBN1-201ENST00000333896 THSD4Q6ZMP0 1018 aa8.9□□□□□ -0.98
SPTBN1-201ENST00000333896 SCGB3A1Q96QR1 104 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 188.4 ms