RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 Q6ZSR3 168 aa13.04□□□□□ -0.32
PDGFB-201ENST00000331163 CLEC18CQ8NCF0 446 aa13.04□□□□□ -0.32
PDGFB-201ENST00000331163 HIST1H2BLQ99880 126 aa13.04□□□□□ -0.32
PDGFB-201ENST00000331163 J3QKU1 62 aa13.04□□□□□ -0.32
PDGFB-201ENST00000331163 VDAC1P21796 283 aa13.04□□□□□ -0.32
PDGFB-201ENST00000331163 ZNF645Q8N7E2 425 aa13.04□□□□□ -0.32
PDGFB-201ENST00000331163 MALSU1Q96EH3 234 aa13.04□□□□□ -0.32
PDGFB-201ENST00000331163 COMMD5Q9GZQ3 224 aa13.04□□□□□ -0.32
PDGFB-201ENST00000331163 PSENENQ9NZ42 101 aa13.04□□□□□ -0.32
PDGFB-201ENST00000331163 S4R3C0 116 aa13.04□□□□□ -0.32
PDGFB-201ENST00000331163 SH2D7A6NKC9 451 aaPredicted RBP13.04□□□□□ -0.32
PDGFB-201ENST00000331163 ZNF266Q14584 549 aa13.04□□□□□ -0.32
PDGFB-201ENST00000331163 RPUSD4Q96CM3 377 aaKnown RBP13.04□□□□□ -0.32
PDGFB-201ENST00000331163 SCGB1D1O95968 90 aa13.03□□□□□ -0.32
PDGFB-201ENST00000331163 SCGB1C1Q8TD33 95 aa13.03□□□□□ -0.32
PDGFB-201ENST00000331163 A0A0G2JRQ6 117 aa13.03□□□□□ -0.32
PDGFB-201ENST00000331163 A0A1W2PPQ1 181 aa13.03□□□□□ -0.32
PDGFB-201ENST00000331163 MMDQ15546 238 aa13.03□□□□□ -0.32
PDGFB-201ENST00000331163 SELENOHQ8IZQ5 122 aaKnown RBP13.03□□□□□ -0.32
PDGFB-201ENST00000331163 HRNRQ86YZ3 2850 aaPredicted RBP13.03□□□□□ -0.32
PDGFB-201ENST00000331163 MARCH11A6NNE9 402 aa13.03□□□□□ -0.32
PDGFB-201ENST00000331163 EREGO14944 169 aa13.03□□□□□ -0.32
PDGFB-201ENST00000331163 EFNA4P52798 201 aa13.03□□□□□ -0.32
PDGFB-201ENST00000331163 ZNF66Q6ZN08 573 aa13.03□□□□□ -0.32
PDGFB-201ENST00000331163 Q71RC1 249 aaPredicted RBP13.03□□□□□ -0.32
PDGFB-201ENST00000331163 FAM103A1Q9BTL3 118 aaKnown RBP13.03□□□□□ -0.32
PDGFB-201ENST00000331163 RSG1Q9BU20 258 aa13.03□□□□□ -0.32
PDGFB-201ENST00000331163 SLC25A31Q9H0C2 315 aa13.03□□□□□ -0.32
PDGFB-201ENST00000331163 LIPFP07098 398 aa13.02□□□□□ -0.32
PDGFB-201ENST00000331163 SRPXP78539 464 aa13.02□□□□□ -0.32
PDGFB-201ENST00000331163 ICAM4Q14773 271 aa13.02□□□□□ -0.32
PDGFB-201ENST00000331163 TNXAQ16473 311 aa13.02□□□□□ -0.32
PDGFB-201ENST00000331163 AURKAIP1Q9NWT8 199 aaPredicted RBP13.02□□□□□ -0.32
PDGFB-201ENST00000331163 RNF223E7ERA6 249 aa13.02□□□□□ -0.33
PDGFB-201ENST00000331163 IGKV1-16P04430 117 aa13.02□□□□□ -0.33
PDGFB-201ENST00000331163 CD55P08174 381 aa13.02□□□□□ -0.33
PDGFB-201ENST00000331163 ZNF25P17030 456 aaPredicted RBP13.02□□□□□ -0.33
PDGFB-201ENST00000331163 C10orf55Q5SWW7 151 aa13.02□□□□□ -0.33
PDGFB-201ENST00000331163 HCP5Q6MZN7 132 aa13.02□□□□□ -0.33
PDGFB-201ENST00000331163 LYPD6BQ8NI32 183 aa13.02□□□□□ -0.33
PDGFB-201ENST00000331163 TMED3Q9Y3Q3 217 aa13.02□□□□□ -0.33
PDGFB-201ENST00000331163 XKRY2A2RUG3 117 aa13.01□□□□□ -0.33
PDGFB-201ENST00000331163 C22orf46C9J442 243 aa13.01□□□□□ -0.33
PDGFB-201ENST00000331163 DEFA4P12838 97 aa13.01□□□□□ -0.33
PDGFB-201ENST00000331163 KRTAP10-9P60411 292 aa13.01□□□□□ -0.33
PDGFB-201ENST00000331163 PMS2P11Q13670 270 aa13.01□□□□□ -0.33
PDGFB-201ENST00000331163 LHFPL4Q7Z7J7 247 aa13.01□□□□□ -0.33
PDGFB-201ENST00000331163 NEU4Q8WWR8 484 aaPredicted RBP13.01□□□□□ -0.33
PDGFB-201ENST00000331163 TRAV3A0A0B4J244 114 aa13.01□□□□□ -0.33
PDGFB-201ENST00000331163 ZNF705FA8MVS1 300 aaPredicted RBP13.01□□□□□ -0.33
PDGFB-201ENST00000331163 ZNF705DP0CH99 300 aaPredicted RBP13.01□□□□□ -0.33
PDGFB-201ENST00000331163 ZNF705BP0CI00 300 aaPredicted RBP13.01□□□□□ -0.33
PDGFB-201ENST00000331163 PDLIM4P50479 330 aa13.01□□□□□ -0.33
PDGFB-201ENST00000331163 SPSB3Q6PJ21 355 aa13.01□□□□□ -0.33
PDGFB-201ENST00000331163 C1QL4Q86Z23 238 aa13.01□□□□□ -0.33
PDGFB-201ENST00000331163 ZNF664Q8N3J9 261 aa13.01□□□□□ -0.33
PDGFB-201ENST00000331163 RPUSD1Q9UJJ7 312 aaKnown RBP13.01□□□□□ -0.33
PDGFB-201ENST00000331163 CLDN34H7C241 214 aa13.01□□□□□ -0.33
PDGFB-201ENST00000331163 IFNA5P01569 189 aa13.01□□□□□ -0.33
PDGFB-201ENST00000331163 FGF7P21781 194 aa13.01□□□□□ -0.33
PDGFB-201ENST00000331163 IL3RAP26951 378 aa13.01□□□□□ -0.33
PDGFB-201ENST00000331163 LOXP28300 417 aaPredicted RBP13.01□□□□□ -0.33
PDGFB-201ENST00000331163 RPL29P47914 159 aaKnown RBP13.01□□□□□ -0.33
PDGFB-201ENST00000331163 RAB7AP51149 207 aa13.01□□□□□ -0.33
PDGFB-201ENST00000331163 ZNF705AQ6ZN79 300 aaPredicted RBP13.01□□□□□ -0.33
PDGFB-201ENST00000331163 TMEM252Q8N6L7 170 aa13.01□□□□□ -0.33
PDGFB-201ENST00000331163 OR13D1Q8NGV5 346 aa13.01□□□□□ -0.33
PDGFB-201ENST00000331163 HES4Q9HCC6 221 aa13.01□□□□□ -0.33
PDGFB-201ENST00000331163 LINC00527Q9UJ94 153 aa13.01□□□□□ -0.33
PDGFB-201ENST00000331163 A0A0U1RQK1 487 aa13□□□□□ -0.33
PDGFB-201ENST00000331163 PRRX1P54821 245 aa13□□□□□ -0.33
PDGFB-201ENST00000331163 BAXQ07812 192 aa13□□□□□ -0.33
PDGFB-201ENST00000331163 FLYWCH2Q96CP2 140 aaKnown RBP13□□□□□ -0.33
PDGFB-201ENST00000331163 PIMREGQ9BSJ6 248 aa13□□□□□ -0.33
PDGFB-201ENST00000331163 C7orf69Q9H7B7 122 aa13□□□□□ -0.33
PDGFB-201ENST00000331163 LINC00312Q9Y6C7 94 aa13□□□□□ -0.33
PDGFB-201ENST00000331163 GATA4P43694 442 aa13□□□□□ -0.33
PDGFB-201ENST00000331163 TFF3Q07654 80 aa13□□□□□ -0.33
PDGFB-201ENST00000331163 Q6ZRM9 215 aa13□□□□□ -0.33
PDGFB-201ENST00000331163 ACY3Q96HD9 319 aa13□□□□□ -0.33
PDGFB-201ENST00000331163 JPT1Q9UK76 154 aa13□□□□□ -0.33
PDGFB-201ENST00000331163 IGHV3-35A0A0C4DH35 117 aa13□□□□□ -0.33
PDGFB-201ENST00000331163 UBE2L5PA0A1B0GUS4 154 aa13□□□□□ -0.33
PDGFB-201ENST00000331163 IGHV4-39P01824 125 aa13□□□□□ -0.33
PDGFB-201ENST00000331163 KIAA1456Q9P272 454 aa13□□□□□ -0.33
PDGFB-201ENST00000331163 SORL1Q92673 2214 aa12.99□□□□□ -0.33
PDGFB-201ENST00000331163 LHBP01229 141 aa12.99□□□□□ -0.33
PDGFB-201ENST00000331163 C17orf58Q2M2W7 97 aa12.99□□□□□ -0.33
PDGFB-201ENST00000331163 FBXL19-AS1Q494R0 122 aa12.99□□□□□ -0.33
PDGFB-201ENST00000331163 CST9LP1Q5W188 147 aa12.99□□□□□ -0.33
PDGFB-201ENST00000331163 TRAT1Q6PIZ9 186 aa12.99□□□□□ -0.33
PDGFB-201ENST00000331163 OR4S2Q8NH73 311 aa12.99□□□□□ -0.33
PDGFB-201ENST00000331163 CELSR1Q9NYQ6 3014 aa12.99□□□□□ -0.33
PDGFB-201ENST00000331163 TOX4O94842 621 aa12.99□□□□□ -0.33
PDGFB-201ENST00000331163 PRB4P10163 310 aaPredicted RBP12.99□□□□□ -0.33
PDGFB-201ENST00000331163 ZNF709Q8N972 641 aa12.99□□□□□ -0.33
PDGFB-201ENST00000331163 CLDND2Q8NHS1 167 aa12.99□□□□□ -0.33
PDGFB-201ENST00000331163 MBNL3Q9NUK0 354 aaKnown RBP12.99□□□□□ -0.33
PDGFB-201ENST00000331163 ELOA3CA0A087WX78 387 aaPredicted RBP12.98□□□□□ -0.33
PDGFB-201ENST00000331163 TRAV40A0A0B4J280 105 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms