RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 RHBDL1O75783 438 aa20.16■□□□□ 0.82
SOX1-201ENST00000330949 CGAP01215 116 aa20.16■□□□□ 0.82
SOX1-201ENST00000330949 ZXDAP98168 799 aa20.16■□□□□ 0.82
SOX1-201ENST00000330949 SPATA31B1PQ5VZV4 182 aa20.16■□□□□ 0.82
SOX1-201ENST00000330949 GALMQ96C23 342 aa20.16■□□□□ 0.82
SOX1-201ENST00000330949 TNFRSF19Q9NS68 423 aa20.16■□□□□ 0.82
SOX1-201ENST00000330949 CELA3BP08861 270 aa20.16■□□□□ 0.82
SOX1-201ENST00000330949 CCL4P13236 92 aa20.16■□□□□ 0.82
SOX1-201ENST00000330949 POM121L2Q96KW2 1035 aa20.16■□□□□ 0.82
SOX1-201ENST00000330949 PRSS47A8MTI9 375 aa20.15■□□□□ 0.82
SOX1-201ENST00000330949 PROK2Q9HC23 129 aa20.15■□□□□ 0.82
SOX1-201ENST00000330949 CRXO43186 299 aaPredicted RBP20.15■□□□□ 0.82
SOX1-201ENST00000330949 FOXH1O75593 365 aa20.15■□□□□ 0.82
SOX1-201ENST00000330949 DUSP3P51452 185 aaPredicted RBP20.15■□□□□ 0.82
SOX1-201ENST00000330949 ZNF430Q9H8G1 570 aaPredicted RBP20.15■□□□□ 0.82
SOX1-201ENST00000330949 NPVFQ9HCQ7 196 aa20.15■□□□□ 0.82
SOX1-201ENST00000330949 C1RLQ9NZP8 487 aa20.15■□□□□ 0.82
SOX1-201ENST00000330949 J3QT63 122 aa20.14■□□□□ 0.82
SOX1-201ENST00000330949 CFIP05156 583 aa20.14■□□□□ 0.82
SOX1-201ENST00000330949 SLC23A3Q6PIS1 610 aa20.14■□□□□ 0.82
SOX1-201ENST00000330949 COMMD5Q9GZQ3 224 aa20.14■□□□□ 0.82
SOX1-201ENST00000330949 SH2D2AQ9NP31 389 aa20.14■□□□□ 0.82
SOX1-201ENST00000330949 TMEM167BQ9NRX6 74 aa20.14■□□□□ 0.82
SOX1-201ENST00000330949 LSM4Q9Y4Z0 139 aaKnown RBP20.14■□□□□ 0.82
SOX1-201ENST00000330949 LY6G6EA0A0G2JKS1 128 aa20.14■□□□□ 0.81
SOX1-201ENST00000330949 CXCL12P48061 93 aa20.14■□□□□ 0.81
SOX1-201ENST00000330949 REG1BP48304 166 aa20.14■□□□□ 0.81
SOX1-201ENST00000330949 HEYLQ9NQ87 328 aaPredicted RBP20.14■□□□□ 0.81
SOX1-201ENST00000330949 U3KQA8 63 aa20.14■□□□□ 0.81
SOX1-201ENST00000330949 PRSS46E5RG02 174 aa20.13■□□□□ 0.81
SOX1-201ENST00000330949 CXCL13O43927 109 aa20.13■□□□□ 0.81
SOX1-201ENST00000330949 STPG3Q8N7X2 389 aa20.13■□□□□ 0.81
SOX1-201ENST00000330949 TP73-AS1Q9UF72 201 aa20.13■□□□□ 0.81
SOX1-201ENST00000330949 TMEM265A0A087WTH1 108 aa20.13■□□□□ 0.81
SOX1-201ENST00000330949 SS18L1O75177 396 aaPredicted RBP20.13■□□□□ 0.81
SOX1-201ENST00000330949 RIPPLY3P57055 190 aa20.13■□□□□ 0.81
SOX1-201ENST00000330949 PCOLCEQ15113 449 aa20.13■□□□□ 0.81
SOX1-201ENST00000330949 SPATA12Q7Z6I5 190 aa20.13■□□□□ 0.81
SOX1-201ENST00000330949 FREM1Q5H8C1 2179 aa20.13■□□□□ 0.81
SOX1-201ENST00000330949 A0A0G2JMM0 328 aa20.12■□□□□ 0.81
SOX1-201ENST00000330949 A0A1W2PPB8 328 aa20.12■□□□□ 0.81
SOX1-201ENST00000330949 KIR3DP1A8MWS1 328 aa20.12■□□□□ 0.81
SOX1-201ENST00000330949 MGST1P10620 155 aaKnown RBP20.12■□□□□ 0.81
SOX1-201ENST00000330949 C9orf135Q5VTT2 229 aa20.12■□□□□ 0.81
SOX1-201ENST00000330949 HLA-DRB1P01911 266 aa20.12■□□□□ 0.81
SOX1-201ENST00000330949 RAB31Q13636 194 aa20.12■□□□□ 0.81
SOX1-201ENST00000330949 FAM162BQ5T6X4 162 aa20.12■□□□□ 0.81
SOX1-201ENST00000330949 Q8IYB0 196 aa20.12■□□□□ 0.81
SOX1-201ENST00000330949 OR2Y1Q8NGV0 311 aa20.12■□□□□ 0.81
SOX1-201ENST00000330949 CLCF1Q9UBD9 225 aa20.12■□□□□ 0.81
SOX1-201ENST00000330949 SLC25A10Q9UBX3 287 aaPredicted RBP20.12■□□□□ 0.81
SOX1-201ENST00000330949 NGFP01138 241 aa20.12■□□□□ 0.81
SOX1-201ENST00000330949 IGLC1P0CG04 106 aa20.12■□□□□ 0.81
SOX1-201ENST00000330949 SMIM21Q3B7S5 101 aa20.12■□□□□ 0.81
SOX1-201ENST00000330949 SPEM1Q8N4L4 309 aa20.12■□□□□ 0.81
SOX1-201ENST00000330949 TEPPQ6URK8 271 aa20.11■□□□□ 0.81
SOX1-201ENST00000330949 SLC25A40Q8TBP6 338 aa20.11■□□□□ 0.81
SOX1-201ENST00000330949 ABHD3Q8WU67 409 aa20.11■□□□□ 0.81
SOX1-201ENST00000330949 TRAV8-6A0A0B4J262 113 aa20.11■□□□□ 0.81
SOX1-201ENST00000330949 OR9G9P0C7N8 305 aa20.11■□□□□ 0.81
SOX1-201ENST00000330949 PSG5Q15238 335 aa20.11■□□□□ 0.81
SOX1-201ENST00000330949 GGNQ86UU5 652 aa20.11■□□□□ 0.81
SOX1-201ENST00000330949 KIR3DL3Q8N743 410 aa20.1■□□□□ 0.81
SOX1-201ENST00000330949 OR2T6Q8NHC8 308 aa20.1■□□□□ 0.81
SOX1-201ENST00000330949 HSD17B10Q99714 261 aaKnown RBP20.1■□□□□ 0.81
SOX1-201ENST00000330949 IGLV2-8P01709 118 aa20.1■□□□□ 0.81
SOX1-201ENST00000330949 PPOXP50336 477 aa20.1■□□□□ 0.81
SOX1-201ENST00000330949 B3GALT5-AS1P59052 145 aa20.1■□□□□ 0.81
SOX1-201ENST00000330949 RPL8P62917 257 aaKnown RBP20.1■□□□□ 0.81
SOX1-201ENST00000330949 GP6Q9HCN6 339 aa20.1■□□□□ 0.81
SOX1-201ENST00000330949 CLEC5AQ9NY25 188 aa20.1■□□□□ 0.81
SOX1-201ENST00000330949 PATE3B3GLJ2 98 aa20.09■□□□□ 0.81
SOX1-201ENST00000330949 K7ESF4 209 aa20.09■□□□□ 0.81
SOX1-201ENST00000330949 SAP30O75446 220 aa20.09■□□□□ 0.81
SOX1-201ENST00000330949 TNFSF15O95150 251 aa20.09■□□□□ 0.81
SOX1-201ENST00000330949 ARR3P36575 388 aa20.09■□□□□ 0.81
SOX1-201ENST00000330949 MFAP2P55001 183 aa20.09■□□□□ 0.81
SOX1-201ENST00000330949 HIST1H1AQ02539 215 aaPredicted RBP20.09■□□□□ 0.81
SOX1-201ENST00000330949 MRPL14Q6P1L8 145 aaKnown RBP20.09■□□□□ 0.81
SOX1-201ENST00000330949 TCF24Q7RTU0 167 aa20.09■□□□□ 0.81
SOX1-201ENST00000330949 LHFPL4Q7Z7J7 247 aa20.09■□□□□ 0.81
SOX1-201ENST00000330949 PRRG4Q9BZD6 226 aa20.09■□□□□ 0.81
SOX1-201ENST00000330949 NBEAQ8NFP9 2946 aa20.09■□□□□ 0.81
SOX1-201ENST00000330949 FAM90A9PA6NNJ1 464 aa20.09■□□□□ 0.81
SOX1-201ENST00000330949 OR2J3O76001 311 aa20.09■□□□□ 0.81
SOX1-201ENST00000330949 LYSMD4Q5XG99 296 aa20.09■□□□□ 0.81
SOX1-201ENST00000330949 NCOR1O75376 2440 aa20.09■□□□□ 0.81
SOX1-201ENST00000330949 LINC00473A8K010 186 aa20.08■□□□□ 0.81
SOX1-201ENST00000330949 FER1L6-AS1Q8NA97 138 aa20.08■□□□□ 0.81
SOX1-201ENST00000330949 OR4A16Q8NH70 328 aa20.08■□□□□ 0.81
SOX1-201ENST00000330949 OR10D3Q8NH80 312 aa20.08■□□□□ 0.81
SOX1-201ENST00000330949 SARAFQ96BY9 339 aa20.08■□□□□ 0.81
SOX1-201ENST00000330949 OR2V2Q96R30 315 aa20.08■□□□□ 0.81
SOX1-201ENST00000330949 TMEM191AQ9H0A3 160 aa20.08■□□□□ 0.81
SOX1-201ENST00000330949 A0A096LPE4 126 aa20.08■□□□□ 0.8
SOX1-201ENST00000330949 A0A1W2PPZ6 126 aa20.08■□□□□ 0.8
SOX1-201ENST00000330949 hDV102S1A0JD36 115 aa20.08■□□□□ 0.8
SOX1-201ENST00000330949 GAGE10A6NGK3 116 aa20.08■□□□□ 0.8
SOX1-201ENST00000330949 C12orf77C9JDV5 145 aa20.08■□□□□ 0.8
SOX1-201ENST00000330949 SYS1-DBNDD2H3BUS1 97 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms