RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 AADACL3Q5VUY0 350 aa13.68□□□□□ -0.22
RAB28-202ENST00000330852 LINC00322Q6ZN03 302 aaPredicted RBP13.68□□□□□ -0.22
RAB28-202ENST00000330852 DNAH7Q8WXX0 4024 aa13.68□□□□□ -0.22
RAB28-202ENST00000330852 CBLN1P23435 193 aa13.67□□□□□ -0.22
RAB28-202ENST00000330852 TMEM17Q86X19 198 aa13.67□□□□□ -0.22
RAB28-202ENST00000330852 LYSMD2Q8IV50 215 aa13.67□□□□□ -0.22
RAB28-202ENST00000330852 DMBX1Q8NFW5 382 aa13.67□□□□□ -0.22
RAB28-202ENST00000330852 OR51H1Q8NH63 302 aa13.67□□□□□ -0.22
RAB28-202ENST00000330852 MOB3AQ96BX8 217 aa13.67□□□□□ -0.22
RAB28-202ENST00000330852 IGLC7A0M8Q6 106 aa13.67□□□□□ -0.22
RAB28-202ENST00000330852 HLA-AP01891 365 aaKnown RBP13.67□□□□□ -0.22
RAB28-202ENST00000330852 ERVK-16P61578 105 aa13.67□□□□□ -0.22
RAB28-202ENST00000330852 C19orf35Q6ZS72 473 aa13.67□□□□□ -0.22
RAB28-202ENST00000330852 CMTM1Q8IZ96 169 aa13.67□□□□□ -0.22
RAB28-202ENST00000330852 SAMD12Q8N8I0 201 aa13.67□□□□□ -0.22
RAB28-202ENST00000330852 MARC2Q969Z3 335 aa13.67□□□□□ -0.22
RAB28-202ENST00000330852 QTRT1Q9BXR0 403 aaKnown RBP13.67□□□□□ -0.22
RAB28-202ENST00000330852 TMEM140Q9NV12 185 aa13.67□□□□□ -0.22
RAB28-202ENST00000330852 FCER2P06734 321 aa13.66□□□□□ -0.22
RAB28-202ENST00000330852 F2RP25116 425 aa13.66□□□□□ -0.22
RAB28-202ENST00000330852 PRSS3P35030 304 aa13.66□□□□□ -0.22
RAB28-202ENST00000330852 TAS2R20P59543 309 aa13.66□□□□□ -0.22
RAB28-202ENST00000330852 OR5H2Q8NGV7 314 aa13.66□□□□□ -0.22
RAB28-202ENST00000330852 CMTM3Q96MX0 182 aa13.66□□□□□ -0.22
RAB28-202ENST00000330852 MEIS3P1A6NDR6 274 aa13.65□□□□□ -0.22
RAB28-202ENST00000330852 S1PR2O95136 353 aa13.65□□□□□ -0.22
RAB28-202ENST00000330852 REG1AP05451 166 aa13.65□□□□□ -0.22
RAB28-202ENST00000330852 CLEC3BP05452 202 aa13.65□□□□□ -0.22
RAB28-202ENST00000330852 MYOD1P15172 320 aa13.65□□□□□ -0.22
RAB28-202ENST00000330852 PTBP1P26599 531 aaKnown RBP eCLIP13.65□□□□□ -0.221e-6■■■■■ 34.9
RAB28-202ENST00000330852 RFX2P48378 723 aa13.65□□□□□ -0.22
RAB28-202ENST00000330852 ELLP55199 621 aaPredicted RBP13.65□□□□□ -0.22
RAB28-202ENST00000330852 GUCA2BQ16661 112 aa13.65□□□□□ -0.22
RAB28-202ENST00000330852 CCDC190Q86UF4 302 aa13.65□□□□□ -0.22
RAB28-202ENST00000330852 OR6F1Q8NGZ6 308 aa13.65□□□□□ -0.22
RAB28-202ENST00000330852 VN1R17PQ8TDU5 208 aa13.65□□□□□ -0.22
RAB28-202ENST00000330852 ATP6V0BQ99437 205 aa13.65□□□□□ -0.22
RAB28-202ENST00000330852 ZNF2Q9BSG1 426 aaPredicted RBP13.65□□□□□ -0.22
RAB28-202ENST00000330852 C6orf62Q9GZU0 229 aaPredicted RBP13.65□□□□□ -0.22
RAB28-202ENST00000330852 PLEKHA3Q9HB20 300 aa13.65□□□□□ -0.22
RAB28-202ENST00000330852 TRAV3A0A0B4J244 114 aa13.64□□□□□ -0.23
RAB28-202ENST00000330852 ZNF320A2RRD8 509 aa13.64□□□□□ -0.23
RAB28-202ENST00000330852 TMEM213A2RRL7 107 aa13.64□□□□□ -0.23
RAB28-202ENST00000330852 PGLYRP1O75594 196 aaPredicted RBP13.64□□□□□ -0.23
RAB28-202ENST00000330852 IGHV3-23P01764 117 aa13.64□□□□□ -0.23
RAB28-202ENST00000330852 TRAPPC2P0DI81 140 aa13.64□□□□□ -0.23
RAB28-202ENST00000330852 TRAPPC2BP0DI82 140 aa13.64□□□□□ -0.23
RAB28-202ENST00000330852 ANKRD55Q3KP44 614 aa13.64□□□□□ -0.23
RAB28-202ENST00000330852 ZNF57Q68EA5 555 aaPredicted RBP13.64□□□□□ -0.23
RAB28-202ENST00000330852 SLC16A13Q7RTY0 426 aa13.64□□□□□ -0.23
RAB28-202ENST00000330852 OR1L8Q8NGR8 309 aa13.64□□□□□ -0.23
RAB28-202ENST00000330852 ZNF502Q8TBZ5 544 aa13.64□□□□□ -0.23
RAB28-202ENST00000330852 SLC25A46Q96AG3 418 aa13.64□□□□□ -0.23
RAB28-202ENST00000330852 FAM212BQ9NTI7 297 aaPredicted RBP13.64□□□□□ -0.23
RAB28-202ENST00000330852 TRAV25A0A0B4J276 109 aa13.64□□□□□ -0.23
RAB28-202ENST00000330852 MARCH11A6NNE9 402 aa13.64□□□□□ -0.23
RAB28-202ENST00000330852 OR11H12B2RN74 326 aa13.64□□□□□ -0.23
RAB28-202ENST00000330852 CD7P09564 240 aa13.64□□□□□ -0.23
RAB28-202ENST00000330852 LPCAT3Q6P1A2 487 aa13.64□□□□□ -0.23
RAB28-202ENST00000330852 GDPD1Q8N9F7 314 aa13.64□□□□□ -0.23
RAB28-202ENST00000330852 IL17DQ8TAD2 202 aa13.64□□□□□ -0.23
RAB28-202ENST00000330852 HIPK2Q9H2X6 1198 aa13.64□□□□□ -0.23
RAB28-202ENST00000330852 MFSD2BA6NFX1 497 aa13.63□□□□□ -0.23
RAB28-202ENST00000330852 GPR31O00270 319 aa13.63□□□□□ -0.23
RAB28-202ENST00000330852 SERPINE2P07093 398 aa13.63□□□□□ -0.23
RAB28-202ENST00000330852 S100GP29377 79 aa13.63□□□□□ -0.23
RAB28-202ENST00000330852 UXS1Q8NBZ7 420 aa13.63□□□□□ -0.23
RAB28-202ENST00000330852 FKBP11Q9NYL4 201 aa13.63□□□□□ -0.23
RAB28-202ENST00000330852 MRPL27Q9P0M9 148 aaKnown RBP13.63□□□□□ -0.23
RAB28-202ENST00000330852 S4R3C0 116 aa13.63□□□□□ -0.23
RAB28-202ENST00000330852 TEX50A0A1B0GTY4 177 aa13.62□□□□□ -0.23
RAB28-202ENST00000330852 SNAPC5O75971 98 aa13.62□□□□□ -0.23
RAB28-202ENST00000330852 APOA1P02647 267 aa13.62□□□□□ -0.23
RAB28-202ENST00000330852 PMP2P02689 132 aa13.62□□□□□ -0.23
RAB28-202ENST00000330852 RLN1P04808 185 aa13.62□□□□□ -0.23
RAB28-202ENST00000330852 C8orf88P0DMB2 117 aa13.62□□□□□ -0.23
RAB28-202ENST00000330852 S100A5P33763 92 aa13.62□□□□□ -0.23
RAB28-202ENST00000330852 PLET1Q6UQ28 207 aa13.62□□□□□ -0.23
RAB28-202ENST00000330852 OR1L6Q8NGR2 347 aa13.62□□□□□ -0.23
RAB28-202ENST00000330852 WDR89Q96FK6 387 aaPredicted RBP13.62□□□□□ -0.23
RAB28-202ENST00000330852 SDHCQ99643 169 aaPredicted RBP13.62□□□□□ -0.23
RAB28-202ENST00000330852 SCPEP1Q9HB40 452 aa13.62□□□□□ -0.23
RAB28-202ENST00000330852 NDUFA4L2Q9NRX3 87 aa13.62□□□□□ -0.23
RAB28-202ENST00000330852 UFC1Q9Y3C8 167 aa13.62□□□□□ -0.23
RAB28-202ENST00000330852 OR13C7P0DN81 318 aa13.61□□□□□ -0.23
RAB28-202ENST00000330852 LPAR6P43657 344 aa13.61□□□□□ -0.23
RAB28-202ENST00000330852 TMEM61Q8N0U2 210 aa13.61□□□□□ -0.23
RAB28-202ENST00000330852 DEFB125Q8N687 156 aa13.61□□□□□ -0.23
RAB28-202ENST00000330852 OR10W1Q8NGF6 305 aa13.61□□□□□ -0.23
RAB28-202ENST00000330852 GPX8Q8TED1 209 aa13.61□□□□□ -0.23
RAB28-202ENST00000330852 SRD5A3Q9H8P0 318 aa13.61□□□□□ -0.23
RAB28-202ENST00000330852 RBMY1BA6NDE4 496 aaKnown RBP13.61□□□□□ -0.23
RAB28-202ENST00000330852 RBMY1EA6NEQ0 496 aaKnown RBP13.61□□□□□ -0.23
RAB28-202ENST00000330852 RBMY1DP0C7P1 496 aaKnown RBP13.61□□□□□ -0.23
RAB28-202ENST00000330852 GPR183P32249 361 aa13.61□□□□□ -0.23
RAB28-202ENST00000330852 SPSB3Q6PJ21 355 aa13.61□□□□□ -0.23
RAB28-202ENST00000330852 FCAMRQ8WWV6 532 aa13.61□□□□□ -0.23
RAB28-202ENST00000330852 CACNG8Q8WXS5 425 aa13.61□□□□□ -0.23
RAB28-202ENST00000330852 LSM10Q969L4 123 aaKnown RBP13.61□□□□□ -0.23
RAB28-202ENST00000330852 ZNF436Q9C0F3 470 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms