RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 RARRES3Q9UL19 164 aa17.13■□□□□ 0.33
CMTM4-201ENST00000330687 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.12■□□□□ 0.33
CMTM4-201ENST00000330687 MMP23AO75900 390 aa17.12■□□□□ 0.33
CMTM4-201ENST00000330687 RAC3P60763 192 aa17.12■□□□□ 0.33
CMTM4-201ENST00000330687 LINC00869P0C866 280 aa17.12■□□□□ 0.33
CMTM4-201ENST00000330687 LRRC10Q5BKY1 277 aa17.12■□□□□ 0.33
CMTM4-201ENST00000330687 SPSB4Q96A44 273 aa17.12■□□□□ 0.33
CMTM4-201ENST00000330687 TMEM45BQ96B21 275 aa17.12■□□□□ 0.33
CMTM4-201ENST00000330687 LINC00473A8K010 186 aa17.12■□□□□ 0.33
CMTM4-201ENST00000330687 ZNF138P52744 262 aa17.12■□□□□ 0.33
CMTM4-201ENST00000330687 TMEM108Q6UXF1 575 aa17.12■□□□□ 0.33
CMTM4-201ENST00000330687 RFPL3SP0C7P2 107 aa17.11■□□□□ 0.33
CMTM4-201ENST00000330687 PLP2Q04941 152 aa17.11■□□□□ 0.33
CMTM4-201ENST00000330687 DCTN5Q9BTE1 182 aa17.11■□□□□ 0.33
CMTM4-201ENST00000330687 TMEM70Q9BUB7 260 aa17.11■□□□□ 0.33
CMTM4-201ENST00000330687 C1QTNF5Q9BXJ0 243 aa17.11■□□□□ 0.33
CMTM4-201ENST00000330687 TRBV9A0A0B4J1U6 114 aa17.11■□□□□ 0.33
CMTM4-201ENST00000330687 CCR5P51681 352 aa17.11■□□□□ 0.33
CMTM4-201ENST00000330687 MORN2Q502X0 79 aa17.11■□□□□ 0.33
CMTM4-201ENST00000330687 PRB4P10163 310 aaPredicted RBP17.11■□□□□ 0.33
CMTM4-201ENST00000330687 PNKDQ8N490 385 aa17.11■□□□□ 0.33
CMTM4-201ENST00000330687 ZNF645Q8N7E2 425 aa17.11■□□□□ 0.33
CMTM4-201ENST00000330687 HILPDAQ9Y5L2 63 aa17.11■□□□□ 0.33
CMTM4-201ENST00000330687 TRAV3A0A0B4J244 114 aa17.1■□□□□ 0.33
CMTM4-201ENST00000330687 BVES-AS1Q5T3Y7 98 aa17.1■□□□□ 0.33
CMTM4-201ENST00000330687 AHRRA9YTQ3 701 aa17.1■□□□□ 0.33
CMTM4-201ENST00000330687 CORTO00230 105 aa17.1■□□□□ 0.33
CMTM4-201ENST00000330687 IGFBP2P18065 325 aa17.1■□□□□ 0.33
CMTM4-201ENST00000330687 RPL24P83731 157 aaKnown RBP17.1■□□□□ 0.33
CMTM4-201ENST00000330687 ZNF826PQ6ZT77 177 aa17.1■□□□□ 0.33
CMTM4-201ENST00000330687 SPACA3Q8IXA5 215 aa17.1■□□□□ 0.33
CMTM4-201ENST00000330687 C5orf30Q96GV9 206 aa17.1■□□□□ 0.33
CMTM4-201ENST00000330687 C12orf77C9JDV5 145 aa17.09■□□□□ 0.33
CMTM4-201ENST00000330687 HBZP02008 142 aa17.09■□□□□ 0.33
CMTM4-201ENST00000330687 SSR4P51571 173 aa17.09■□□□□ 0.33
CMTM4-201ENST00000330687 MOB3BQ86TA1 216 aa17.09■□□□□ 0.33
CMTM4-201ENST00000330687 ZNF503-AS2A6NEH8 195 aa17.09■□□□□ 0.33
CMTM4-201ENST00000330687 WNT9BO14905 357 aa17.09■□□□□ 0.33
CMTM4-201ENST00000330687 FKBP2P26885 142 aaKnown RBP17.09■□□□□ 0.33
CMTM4-201ENST00000330687 GDF1P27539 372 aa17.09■□□□□ 0.33
CMTM4-201ENST00000330687 TMEM116Q8NCL8 245 aa17.09■□□□□ 0.33
CMTM4-201ENST00000330687 SMIM12Q96EX1 92 aa17.09■□□□□ 0.33
CMTM4-201ENST00000330687 TRIB1Q96RU8 372 aa17.09■□□□□ 0.33
CMTM4-201ENST00000330687 ZNF718Q3SXZ3 478 aa17.09■□□□□ 0.33
CMTM4-201ENST00000330687 PI4KAP42356 2102 aa17.08■□□□□ 0.33
CMTM4-201ENST00000330687 COL4A2P08572 1712 aa17.08■□□□□ 0.33
CMTM4-201ENST00000330687 IGLV3-32A0A0A0MS00 114 aa17.08■□□□□ 0.33
CMTM4-201ENST00000330687 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.08■□□□□ 0.33
CMTM4-201ENST00000330687 Q8N7P7 452 aa17.08■□□□□ 0.33
CMTM4-201ENST00000330687 C12orf49Q9H741 205 aa17.08■□□□□ 0.33
CMTM4-201ENST00000330687 TNFRSF19Q9NS68 423 aa17.08■□□□□ 0.33
CMTM4-201ENST00000330687 RAB31Q13636 194 aa17.08■□□□□ 0.32
CMTM4-201ENST00000330687 OR52E5Q8NH55 327 aa17.08■□□□□ 0.32
CMTM4-201ENST00000330687 GNG12Q9UBI6 72 aa17.08■□□□□ 0.32
CMTM4-201ENST00000330687 C7orf71A4D174 169 aa17.08■□□□□ 0.32
CMTM4-201ENST00000330687 GJE1A6NN92 205 aa17.08■□□□□ 0.32
CMTM4-201ENST00000330687 CIDEAO60543 219 aa17.08■□□□□ 0.32
CMTM4-201ENST00000330687 MYOD1P15172 320 aa17.08■□□□□ 0.32
CMTM4-201ENST00000330687 SRD5A2P31213 254 aa17.08■□□□□ 0.32
CMTM4-201ENST00000330687 OPRK1P41145 380 aa17.08■□□□□ 0.32
CMTM4-201ENST00000330687 RPS19BP1Q86WX3 136 aaKnown RBP17.08■□□□□ 0.32
CMTM4-201ENST00000330687 KCNE4Q8WWG9 221 aa17.08■□□□□ 0.32
CMTM4-201ENST00000330687 OR1N2Q8NGR9 330 aa17.07■□□□□ 0.32
CMTM4-201ENST00000330687 ROS1P08922 2347 aa17.07■□□□□ 0.32
CMTM4-201ENST00000330687 CACNA1EQ15878 2313 aa17.07■□□□□ 0.32
CMTM4-201ENST00000330687 TRAV9-1A0A075B6T8 112 aa17.07■□□□□ 0.32
CMTM4-201ENST00000330687 PSPNO60542 156 aa17.07■□□□□ 0.32
CMTM4-201ENST00000330687 ZNF784Q8NCA9 323 aaPredicted RBP17.07■□□□□ 0.32
CMTM4-201ENST00000330687 PRDM14Q9GZV8 571 aa17.07■□□□□ 0.32
CMTM4-201ENST00000330687 PTPRSQ13332 1948 aa17.07■□□□□ 0.32
CMTM4-201ENST00000330687 TRIOBPQ9H2D6 2365 aa17.07■□□□□ 0.32
CMTM4-201ENST00000330687 ZNF716A6NP11 495 aa17.06■□□□□ 0.32
CMTM4-201ENST00000330687 P04436 131 aa17.06■□□□□ 0.32
CMTM4-201ENST00000330687 SRSF7Q16629 238 aaKnown RBP eCLIP17.06■□□□□ 0.32
CMTM4-201ENST00000330687 SH2D2AQ9NP31 389 aa17.06■□□□□ 0.32
CMTM4-201ENST00000330687 LEPROTL1O95214 131 aa17.06■□□□□ 0.32
CMTM4-201ENST00000330687 ERVK-16P61578 105 aa17.06■□□□□ 0.32
CMTM4-201ENST00000330687 TRGV10A0A0A0MS01 117 aa17.06■□□□□ 0.32
CMTM4-201ENST00000330687 H3BUT2 72 aa17.06■□□□□ 0.32
CMTM4-201ENST00000330687 BRWD1-AS2P59051 145 aa17.06■□□□□ 0.32
CMTM4-201ENST00000330687 TEPPQ6URK8 271 aa17.06■□□□□ 0.32
CMTM4-201ENST00000330687 C12orf54Q6X4T0 127 aa17.06■□□□□ 0.32
CMTM4-201ENST00000330687 TUSC5Q8IXB3 177 aa17.06■□□□□ 0.32
CMTM4-201ENST00000330687 OR1B1Q8NGR6 318 aa17.06■□□□□ 0.32
CMTM4-201ENST00000330687 SAP30LQ9HAJ7 183 aa17.06■□□□□ 0.32
CMTM4-201ENST00000330687 ENY2Q9NPA8 101 aa17.06■□□□□ 0.32
CMTM4-201ENST00000330687 IGHV3-48P01763 117 aa17.05■□□□□ 0.32
CMTM4-201ENST00000330687 TMEM251Q8N6I4 163 aa17.05■□□□□ 0.32
CMTM4-201ENST00000330687 CLDN18P56856 261 aa17.05■□□□□ 0.32
CMTM4-201ENST00000330687 TM4SF20Q53R12 229 aa17.05■□□□□ 0.32
CMTM4-201ENST00000330687 ZNF497Q6ZNH5 498 aa17.05■□□□□ 0.32
CMTM4-201ENST00000330687 LHFPL4Q7Z7J7 247 aa17.05■□□□□ 0.32
CMTM4-201ENST00000330687 RAB1CQ92928 201 aa17.05■□□□□ 0.32
CMTM4-201ENST00000330687 VWC2Q2TAL6 325 aa17.05■□□□□ 0.32
CMTM4-201ENST00000330687 NPVFQ9HCQ7 196 aa17.05■□□□□ 0.32
CMTM4-201ENST00000330687 DYSFO75923 2080 aa17.04■□□□□ 0.32
CMTM4-201ENST00000330687 FAM231BA6NCW3 169 aa17.04■□□□□ 0.32
CMTM4-201ENST00000330687 H0YJW9 148 aa17.04■□□□□ 0.32
CMTM4-201ENST00000330687 GPR12P47775 334 aa17.04■□□□□ 0.32
CMTM4-201ENST00000330687 SCCPDHQ8NBX0 429 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms