RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 TPRP12270 2363 aaKnown RBP6.55□□□□□ -1.36
VMA21-201ENST00000330374 CRYBB3P26998 211 aa6.55□□□□□ -1.36
VMA21-201ENST00000330374 PQLC2Q6ZP29 291 aa6.55□□□□□ -1.36
VMA21-201ENST00000330374 DUSP23Q9BVJ7 150 aa6.55□□□□□ -1.36
VMA21-201ENST00000330374 TMEM30CPA0ZSE6 113 aa6.55□□□□□ -1.36
VMA21-201ENST00000330374 PATE3B3GLJ2 98 aa6.55□□□□□ -1.36
VMA21-201ENST00000330374 CD99P14209 185 aa6.55□□□□□ -1.36
VMA21-201ENST00000330374 YPEL3P61236 119 aaPredicted RBP6.55□□□□□ -1.36
VMA21-201ENST00000330374 TP73-AS1Q9UF72 201 aa6.55□□□□□ -1.36
VMA21-201ENST00000330374 PRR33A8MZF0 331 aa6.55□□□□□ -1.36
VMA21-201ENST00000330374 SMPD2O60906 423 aa6.55□□□□□ -1.36
VMA21-201ENST00000330374 OR10J4P0C629 311 aa6.55□□□□□ -1.36
VMA21-201ENST00000330374 MYOD1P15172 320 aa6.55□□□□□ -1.36
VMA21-201ENST00000330374 GATA2P23769 480 aaPredicted RBP6.55□□□□□ -1.36
VMA21-201ENST00000330374 ARR3P36575 388 aa6.55□□□□□ -1.36
VMA21-201ENST00000330374 COMPP49747 757 aaPredicted RBP6.55□□□□□ -1.36
VMA21-201ENST00000330374 Q8N7P7 452 aa6.55□□□□□ -1.36
VMA21-201ENST00000330374 OR2M7Q8NG81 312 aa6.55□□□□□ -1.36
VMA21-201ENST00000330374 RNASE8Q8TDE3 154 aaKnown RBP6.55□□□□□ -1.36
VMA21-201ENST00000330374 LEAP2Q969E1 77 aa6.55□□□□□ -1.36
VMA21-201ENST00000330374 SSBP3Q9BWW4 388 aaPredicted RBP6.55□□□□□ -1.36
VMA21-201ENST00000330374 PPP1R14DQ9NXH3 145 aa6.55□□□□□ -1.36
VMA21-201ENST00000330374 GNG12Q9UBI6 72 aa6.55□□□□□ -1.36
VMA21-201ENST00000330374 M0R1X1 148 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 CXorf1O96002 111 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 GPX1P07203 203 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 GCHFRP30047 84 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 Q6ZR03 302 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 OR13A1Q8NGR1 328 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 LOXL2Q9Y4K0 774 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 F2RL2O00254 374 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 RAB29O14966 203 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 LINC00614P0C842 121 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 GNG4P50150 75 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 RPL39P5Q59GN2 51 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 CENPWQ5EE01 88 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 LYSMD4Q5XG99 296 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 SAP25Q8TEE9 199 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 ST6GALNAC6Q969X2 333 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 GGTLC1Q9BX51 225 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 RNF24Q9Y225 148 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 ZFP30Q9Y2G7 519 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 POLDIP2Q9Y2S7 368 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 TIMM8BQ9Y5J9 83 aaPredicted RBP6.54□□□□□ -1.36
VMA21-201ENST00000330374 NPIPB11E5RHQ5 1161 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 GPR12P47775 334 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 GAGE1Q13065 139 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 PSG5Q15238 335 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 PPP1R32Q7Z5V6 425 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 C1orf159Q96HA4 380 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 HSD17B10Q99714 261 aaKnown RBP6.54□□□□□ -1.36
VMA21-201ENST00000330374 PKIBQ9C010 78 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 BOKQ9UMX3 212 aaPredicted RBP6.54□□□□□ -1.36
VMA21-201ENST00000330374 OR7C2O60412 319 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 STAG3L2P0CL84 134 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 STAG3L3P0CL85 134 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 IL11RAQ14626 422 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 WDR73Q6P4I2 378 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 MIR17HGQ75NE6 70 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 SLC25A40Q8TBP6 338 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 LAMTOR2Q9Y2Q5 125 aa6.54□□□□□ -1.36
VMA21-201ENST00000330374 CCL25O15444 150 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 HYPMO75409 117 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 CXCL12P48061 93 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 Q56UQ5 140 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 GCNT2Q8N0V5 402 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 OR4B1Q8NGF8 309 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 TAAR6Q96RI8 345 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 MBNL3Q9NUK0 354 aaKnown RBP6.53□□□□□ -1.36
VMA21-201ENST00000330374 TET2Q6N021 2002 aaPredicted RBP6.53□□□□□ -1.36
VMA21-201ENST00000330374 A0A1W2PS18 150 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 LYZL6O75951 148 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 NDUFB8O95169 186 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 C3orf79P0CE67 100 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 ZNF83P51522 516 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 SUMO2P61956 95 aaKnown RBP6.53□□□□□ -1.36
VMA21-201ENST00000330374 SELENOTP62341 195 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 FOXF2Q12947 444 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 DGAT2L7PQ6IED9 249 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 MOB3BQ86TA1 216 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 C1orf174Q8IYL3 243 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 STPG3Q8N7X2 389 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 BORCS7Q96B45 105 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 RNF2Q99496 336 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 SRSF8Q9BRL6 282 aaKnown RBP6.53□□□□□ -1.36
VMA21-201ENST00000330374 DEFB127Q9H1M4 99 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 HELTA6NFD8 242 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 AHRRA9YTQ3 701 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 CLDN18P56856 261 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 EFNB3Q15768 340 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 COQ2Q96H96 371 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 PLEKHA3Q9HB20 300 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 SLC35D1Q9NTN3 355 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 CLCF1Q9UBD9 225 aa6.53□□□□□ -1.36
VMA21-201ENST00000330374 TNRC6AQ8NDV7 1962 aaKnown RBP6.53□□□□□ -1.36
VMA21-201ENST00000330374 LOC102724200A0A096LPH7 203 aaPredicted RBP6.52□□□□□ -1.36
VMA21-201ENST00000330374 DPRXA6NFQ7 191 aa6.52□□□□□ -1.36
VMA21-201ENST00000330374 P0C879 139 aa6.52□□□□□ -1.36
VMA21-201ENST00000330374 GYPEP15421 78 aa6.52□□□□□ -1.36
VMA21-201ENST00000330374 IGFBP2P18065 325 aa6.52□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms