RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 SAA1P0DJI8 122 aaPredicted RBP11.87□□□□□ -0.51
TPM3-206ENST00000330188 GALR1P47211 349 aa11.87□□□□□ -0.51
TPM3-206ENST00000330188 RPL29P47914 159 aaKnown RBP11.87□□□□□ -0.51
TPM3-206ENST00000330188 LYPD2Q6UXB3 125 aa11.87□□□□□ -0.51
TPM3-206ENST00000330188 CCL17Q92583 94 aa11.87□□□□□ -0.51
TPM3-206ENST00000330188 TMEM106BQ9NUM4 274 aa11.87□□□□□ -0.51
TPM3-206ENST00000330188 BET1LQ9NYM9 111 aa11.87□□□□□ -0.51
TPM3-206ENST00000330188 ACACAQ13085 2346 aa11.87□□□□□ -0.51
TPM3-206ENST00000330188 SHISA9B4DS77 424 aa11.87□□□□□ -0.51
TPM3-206ENST00000330188 F6UZH7 168 aa11.87□□□□□ -0.51
TPM3-206ENST00000330188 K7ENP7 123 aa11.87□□□□□ -0.51
TPM3-206ENST00000330188 IGFBP2P18065 325 aa11.87□□□□□ -0.51
TPM3-206ENST00000330188 EFNB3Q15768 340 aa11.87□□□□□ -0.51
TPM3-206ENST00000330188 DMRTC2Q8IXT2 367 aaPredicted RBP11.87□□□□□ -0.51
TPM3-206ENST00000330188 RNASE6Q93091 150 aaKnown RBP11.87□□□□□ -0.51
TPM3-206ENST00000330188 ANAPC16Q96DE5 110 aa11.87□□□□□ -0.51
TPM3-206ENST00000330188 H0YJW9 148 aa11.86□□□□□ -0.51
TPM3-206ENST00000330188 PRR20EP86478 221 aa11.86□□□□□ -0.51
TPM3-206ENST00000330188 PRR20CP86479 221 aa11.86□□□□□ -0.51
TPM3-206ENST00000330188 PRR20DP86480 221 aa11.86□□□□□ -0.51
TPM3-206ENST00000330188 PRR20BP86481 221 aa11.86□□□□□ -0.51
TPM3-206ENST00000330188 PRR20AP86496 221 aa11.86□□□□□ -0.51
TPM3-206ENST00000330188 SPATA31B1PQ5VZV4 182 aa11.86□□□□□ -0.51
TPM3-206ENST00000330188 OSR1Q8TAX0 266 aaPredicted RBP11.86□□□□□ -0.51
TPM3-206ENST00000330188 TXNDC17Q9BRA2 123 aa11.86□□□□□ -0.51
TPM3-206ENST00000330188 DERL1Q9BUN8 251 aa11.86□□□□□ -0.51
TPM3-206ENST00000330188 ELOVL1Q9BW60 279 aa11.86□□□□□ -0.51
TPM3-206ENST00000330188 SRD5A3Q9H8P0 318 aa11.86□□□□□ -0.51
TPM3-206ENST00000330188 MUC6Q6W4X9 2439 aa11.86□□□□□ -0.51
TPM3-206ENST00000330188 VSTM5A8MXK1 200 aa11.86□□□□□ -0.51
TPM3-206ENST00000330188 E7EQL1 145 aa11.86□□□□□ -0.51
TPM3-206ENST00000330188 NDUFB4O95168 129 aa11.86□□□□□ -0.51
TPM3-206ENST00000330188 APOA2P02652 100 aa11.86□□□□□ -0.51
TPM3-206ENST00000330188 RAB31Q13636 194 aa11.86□□□□□ -0.51
TPM3-206ENST00000330188 LINC01551Q86U37 167 aa11.86□□□□□ -0.51
TPM3-206ENST00000330188 H1FXQ92522 213 aaKnown RBP11.86□□□□□ -0.51
TPM3-206ENST00000330188 OR5B12Q96R08 314 aa11.86□□□□□ -0.51
TPM3-206ENST00000330188 SEPSECSQ9HD40 501 aaKnown RBP11.86□□□□□ -0.51
TPM3-206ENST00000330188 NIT2Q9NQR4 276 aa11.86□□□□□ -0.51
TPM3-206ENST00000330188 CTSZQ9UBR2 303 aa11.86□□□□□ -0.51
TPM3-206ENST00000330188 NDUFB3O43676 98 aa11.85□□□□□ -0.51
TPM3-206ENST00000330188 LINC00869P0C866 280 aa11.85□□□□□ -0.51
TPM3-206ENST00000330188 S100PP25815 95 aa11.85□□□□□ -0.51
TPM3-206ENST00000330188 RHOBP62745 196 aa11.85□□□□□ -0.51
TPM3-206ENST00000330188 C4orf17Q53FE4 359 aa11.85□□□□□ -0.51
TPM3-206ENST00000330188 OR5AN1Q8NGI8 311 aa11.85□□□□□ -0.51
TPM3-206ENST00000330188 OR5B3Q8NH48 314 aa11.85□□□□□ -0.51
TPM3-206ENST00000330188 FAM122AQ96E09 287 aa11.85□□□□□ -0.51
TPM3-206ENST00000330188 HARBI1Q96MB7 349 aa11.85□□□□□ -0.51
TPM3-206ENST00000330188 SCNM1Q9BWG6 230 aa11.85□□□□□ -0.51
TPM3-206ENST00000330188 FKBP11Q9NYL4 201 aa11.85□□□□□ -0.51
TPM3-206ENST00000330188 APC2O95996 2303 aa11.85□□□□□ -0.51
TPM3-206ENST00000330188 TNCP24821 2201 aa11.84□□□□□ -0.51
TPM3-206ENST00000330188 GCHFRP30047 84 aa11.84□□□□□ -0.51
TPM3-206ENST00000330188 TMEM177Q53S58 311 aa11.84□□□□□ -0.51
TPM3-206ENST00000330188 C2orf83Q53S99 150 aa11.84□□□□□ -0.51
TPM3-206ENST00000330188 LRRC10Q5BKY1 277 aa11.84□□□□□ -0.51
TPM3-206ENST00000330188 MOB3BQ86TA1 216 aa11.84□□□□□ -0.51
TPM3-206ENST00000330188 OR5T1Q8NG75 326 aa11.84□□□□□ -0.51
TPM3-206ENST00000330188 NGBQ9NPG2 151 aa11.84□□□□□ -0.51
TPM3-206ENST00000330188 PCNX1Q96RV3 2341 aa11.84□□□□□ -0.51
TPM3-206ENST00000330188 DVL1O14640 695 aa11.84□□□□□ -0.51
TPM3-206ENST00000330188 SOD3P08294 240 aa11.84□□□□□ -0.51
TPM3-206ENST00000330188 RNASE2P10153 161 aaKnown RBP11.84□□□□□ -0.51
TPM3-206ENST00000330188 COL8A2P25067 703 aa11.84□□□□□ -0.51
TPM3-206ENST00000330188 REG1BP48304 166 aa11.84□□□□□ -0.51
TPM3-206ENST00000330188 GFI1BQ5VTD9 330 aa11.84□□□□□ -0.51
TPM3-206ENST00000330188 TMEM144Q7Z5S9 345 aa11.84□□□□□ -0.51
TPM3-206ENST00000330188 HIST3H2BBQ8N257 126 aa11.84□□□□□ -0.51
TPM3-206ENST00000330188 ZNF596Q8TC21 504 aa11.84□□□□□ -0.51
TPM3-206ENST00000330188 DYNLRB1Q9NP97 96 aa11.84□□□□□ -0.51
TPM3-206ENST00000330188 SLC45A2Q9UMX9 530 aa11.84□□□□□ -0.51
TPM3-206ENST00000330188 YTHDF2Q9Y5A9 579 aaKnown RBP11.84□□□□□ -0.51
TPM3-206ENST00000330188 ELOA3CA0A087WX78 387 aaPredicted RBP11.83□□□□□ -0.52
TPM3-206ENST00000330188 SCO2A0A1W2PP80 73 aa11.83□□□□□ -0.52
TPM3-206ENST00000330188 PPP1R2P9O14990 202 aa11.83□□□□□ -0.52
TPM3-206ENST00000330188 FOXH1O75593 365 aa11.83□□□□□ -0.52
TPM3-206ENST00000330188 LOXP28300 417 aaPredicted RBP11.83□□□□□ -0.52
TPM3-206ENST00000330188 DLX6P56179 175 aa11.83□□□□□ -0.52
TPM3-206ENST00000330188 ATP5IP56385 69 aaPredicted RBP11.83□□□□□ -0.52
TPM3-206ENST00000330188 RBPJQ06330 500 aa11.83□□□□□ -0.52
TPM3-206ENST00000330188 FAM71F2Q6NXP2 309 aa11.83□□□□□ -0.52
TPM3-206ENST00000330188 LINC00311Q8N616 119 aa11.83□□□□□ -0.52
TPM3-206ENST00000330188 ZNF114Q8NC26 417 aa11.83□□□□□ -0.52
TPM3-206ENST00000330188 OR1L8Q8NGR8 309 aa11.83□□□□□ -0.52
TPM3-206ENST00000330188 OR4X1Q8NH49 305 aa11.83□□□□□ -0.52
TPM3-206ENST00000330188 NABP2Q9BQ15 211 aa11.83□□□□□ -0.52
TPM3-206ENST00000330188 TMEM204Q9BSN7 226 aa11.83□□□□□ -0.52
TPM3-206ENST00000330188 NDUFA4L2Q9NRX3 87 aa11.83□□□□□ -0.52
TPM3-206ENST00000330188 GAR1Q9NY12 217 aaKnown RBP11.83□□□□□ -0.52
TPM3-206ENST00000330188 IGKV1OR2-108A0A075B7D4 117 aa11.83□□□□□ -0.52
TPM3-206ENST00000330188 GGCTO75223 188 aaKnown RBP11.83□□□□□ -0.52
TPM3-206ENST00000330188 CHRNB4P30926 498 aa11.83□□□□□ -0.52
TPM3-206ENST00000330188 DIAPH2-AS1Q14236 149 aa11.83□□□□□ -0.52
TPM3-206ENST00000330188 CLEC12BQ2HXU8 276 aa11.83□□□□□ -0.52
TPM3-206ENST00000330188 C8orf31Q8N9H6 132 aa11.83□□□□□ -0.52
TPM3-206ENST00000330188 OR10W1Q8NGF6 305 aa11.83□□□□□ -0.52
TPM3-206ENST00000330188 OR10X1Q8NGY0 326 aa11.83□□□□□ -0.52
TPM3-206ENST00000330188 FLYWCH2Q96CP2 140 aaKnown RBP11.83□□□□□ -0.52
TPM3-206ENST00000330188 PCGF1Q9BSM1 259 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms